RNA–Protein interactions for RNA: ENST00000467336.6

PCNX2-208, Transcript of pecanex 2, humanhuman

TSL 4

Gene PCNX2, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-208ENST00000467336 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
PCNX2-208ENST00000467336 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
PCNX2-208ENST00000467336 ABCC9O60706 1549 aa38.58■■■■□ 3.77
PCNX2-208ENST00000467336 DCAF8L2P0C7V8 631 aa36.8■■■■□ 3.48
PCNX2-208ENST00000467336 RB1CC1Q8TDY2 1594 aa36.77■■■■□ 3.48
PCNX2-208ENST00000467336 NACADO15069 1562 aa36.59■■■■□ 3.45
PCNX2-208ENST00000467336 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.38
PCNX2-208ENST00000467336 ZCCHC6Q5VYS8 1495 aaKnown RBP36.07■■■■□ 3.37
PCNX2-208ENST00000467336 PABPN1Q86U42 306 aaKnown RBP eCLIP36.06■■■■□ 3.36
PCNX2-208ENST00000467336 UNC13AQ9UPW8 1703 aa35.92■■■■□ 3.34
PCNX2-208ENST00000467336 DNAJC5BQ9UF47 199 aa35.9■■■■□ 3.34
PCNX2-208ENST00000467336 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
PCNX2-208ENST00000467336 BICRAQ9NZM4 1560 aa35.69■■■■□ 3.3
PCNX2-208ENST00000467336 SCRIBQ14160 1630 aa35.47■■■■□ 3.27
PCNX2-208ENST00000467336 SHROOM4Q9ULL8 1493 aa35.13■■■■□ 3.21
PCNX2-208ENST00000467336 CC2D2AQ9P2K1 1620 aa34.8■■■■□ 3.16
PCNX2-208ENST00000467336 EIF4G1Q04637 1599 aaKnown RBP34.79■■■■□ 3.16
PCNX2-208ENST00000467336 CECR2Q9BXF3 1484 aa34.67■■■■□ 3.14
PCNX2-208ENST00000467336 SMARCA4P51532 1647 aa33.82■■■■□ 3
PCNX2-208ENST00000467336 NCAPD3P42695 1498 aa33.81■■■■□ 3
PCNX2-208ENST00000467336 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
PCNX2-208ENST00000467336 BAZ1AQ9NRL2 1556 aaPredicted RBP33.69■■■□□ 2.98
PCNX2-208ENST00000467336 SMARCA2P51531 1590 aa33.67■■■□□ 2.98
PCNX2-208ENST00000467336 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
PCNX2-208ENST00000467336 HMGXB3Q12766 1538 aa33.53■■■□□ 2.96
PCNX2-208ENST00000467336 BAZ1BQ9UIG0 1483 aaKnown RBP33.49■■■□□ 2.95
PCNX2-208ENST00000467336 PEG3Q9GZU2 1588 aa33.41■■■□□ 2.94
PCNX2-208ENST00000467336 ERCC6Q03468 1493 aa33.26■■■□□ 2.92
PCNX2-208ENST00000467336 NESP48681 1621 aa33.24■■■□□ 2.91
PCNX2-208ENST00000467336 WIZO95785 1651 aa33.16■■■□□ 2.9
PCNX2-208ENST00000467336 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
PCNX2-208ENST00000467336 CUX2O14529 1486 aa32.97■■■□□ 2.87
PCNX2-208ENST00000467336 LAMC3Q9Y6N6 1575 aa32.95■■■□□ 2.86
PCNX2-208ENST00000467336 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
PCNX2-208ENST00000467336 PDS5BQ9NTI5 1447 aa32.81■■■□□ 2.84
PCNX2-208ENST00000467336 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
PCNX2-208ENST00000467336 TOP2AP11388 1531 aaKnown RBP32.72■■■□□ 2.83
PCNX2-208ENST00000467336 THOC2Q8NI27 1593 aaKnown RBP32.71■■■□□ 2.83
PCNX2-208ENST00000467336 DNAJC5Q9H3Z4 198 aa32.64■■■□□ 2.82
PCNX2-208ENST00000467336 CFTRP13569 1480 aa32.51■■■□□ 2.79
PCNX2-208ENST00000467336 MRC2Q9UBG0 1479 aa32.49■■■□□ 2.79
PCNX2-208ENST00000467336 FANCD2Q9BXW9 1451 aa32.47■■■□□ 2.79
PCNX2-208ENST00000467336 CEP164Q9UPV0 1460 aa32.45■■■□□ 2.79
PCNX2-208ENST00000467336 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
PCNX2-208ENST00000467336 WDR62O43379 1518 aa32.36■■■□□ 2.77
PCNX2-208ENST00000467336 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
PCNX2-208ENST00000467336 PRDM2Q13029 1718 aa32.13■■■□□ 2.73
PCNX2-208ENST00000467336 SUPT5HO00267 1087 aaKnown RBP32■■■□□ 2.71
PCNX2-208ENST00000467336 TOPBP1Q92547 1522 aa31.89■■■□□ 2.7
PCNX2-208ENST00000467336 ABCC8Q09428 1581 aa31.8■■■□□ 2.68
PCNX2-208ENST00000467336 IFT140Q96RY7 1462 aa31.78■■■□□ 2.68
PCNX2-208ENST00000467336 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
PCNX2-208ENST00000467336 ZNF608Q9ULD9 1512 aaPredicted RBP31.75■■■□□ 2.67
PCNX2-208ENST00000467336 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
PCNX2-208ENST00000467336 POLA1P09884 1462 aaPredicted RBP31.58■■■□□ 2.65
PCNX2-208ENST00000467336 TARBP1Q13395 1621 aaKnown RBP31.53■■■□□ 2.64
PCNX2-208ENST00000467336 AQRO60306 1485 aaKnown RBP eCLIP31.53■■■□□ 2.64
PCNX2-208ENST00000467336 RAD54L2Q9Y4B4 1467 aa31.52■■■□□ 2.64
PCNX2-208ENST00000467336 EIF4G3O43432 1585 aaKnown RBP31.51■■■□□ 2.64
PCNX2-208ENST00000467336 SOGA1O94964 1423 aa31.5■■■□□ 2.63
PCNX2-208ENST00000467336 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
PCNX2-208ENST00000467336 CUX1P39880 1505 aa31.48■■■□□ 2.63
PCNX2-208ENST00000467336 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
PCNX2-208ENST00000467336 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
PCNX2-208ENST00000467336 FBLN2P98095 1184 aa31.35■■■□□ 2.61
PCNX2-208ENST00000467336 CHD1O14646 1710 aa31.23■■■□□ 2.59
PCNX2-208ENST00000467336 SNAPC4Q5SXM2 1469 aa31.18■■■□□ 2.58
PCNX2-208ENST00000467336 WDR97A6NE52 1622 aa31.15■■■□□ 2.58
PCNX2-208ENST00000467336 GRIN2BQ13224 1484 aa31.14■■■□□ 2.57
PCNX2-208ENST00000467336 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
PCNX2-208ENST00000467336 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
PCNX2-208ENST00000467336 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
PCNX2-208ENST00000467336 CHMP7Q8WUX9 453 aaPredicted RBP31.12■■■□□ 2.57
PCNX2-208ENST00000467336 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
PCNX2-208ENST00000467336 GAPVD1Q14C86 1478 aa31.09■■■□□ 2.57
PCNX2-208ENST00000467336 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
PCNX2-208ENST00000467336 ARHGEF11O15085 1522 aa31.07■■■□□ 2.56
PCNX2-208ENST00000467336 MAGI1Q96QZ7 1491 aaPredicted RBP31.06■■■□□ 2.56
PCNX2-208ENST00000467336 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
PCNX2-208ENST00000467336 TOP2BQ02880 1626 aa31.03■■■□□ 2.56
PCNX2-208ENST00000467336 BIVM-ERCC5R4GMW8 1640 aa31.01■■■□□ 2.55
PCNX2-208ENST00000467336 PBRM1Q86U86 1689 aa30.99■■■□□ 2.55
PCNX2-208ENST00000467336 SYNJ2O15056 1496 aa30.97■■■□□ 2.55
PCNX2-208ENST00000467336 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
PCNX2-208ENST00000467336 CYB5RLQ6IPT4 315 aa30.96■■■□□ 2.55
PCNX2-208ENST00000467336 CLASP1Q7Z460 1538 aa30.84■■■□□ 2.53
PCNX2-208ENST00000467336 ARAP1Q96P48 1450 aa30.8■■■□□ 2.52
PCNX2-208ENST00000467336 ADAMTS12P58397 1594 aa30.72■■■□□ 2.51
PCNX2-208ENST00000467336 GRIN2AQ12879 1464 aa30.72■■■□□ 2.51
PCNX2-208ENST00000467336 FHAD1B1AJZ9 1412 aa30.7■■■□□ 2.5
PCNX2-208ENST00000467336 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
PCNX2-208ENST00000467336 CEP170Q5SW79 1584 aa30.59■■■□□ 2.49
PCNX2-208ENST00000467336 NUP160Q12769 1436 aa30.58■■■□□ 2.49
PCNX2-208ENST00000467336 TRHP20396 242 aaPredicted RBP30.52■■■□□ 2.48
PCNX2-208ENST00000467336 KIF27Q86VH2 1401 aa30.5■■■□□ 2.47
PCNX2-208ENST00000467336 ERCC6L2Q5T890 1561 aa30.48■■■□□ 2.47
PCNX2-208ENST00000467336 IGF1RP08069 1367 aa30.47■■■□□ 2.47
PCNX2-208ENST00000467336 JPH4Q96JJ6 628 aa30.39■■■□□ 2.46
PCNX2-208ENST00000467336 SHROOM2Q13796 1616 aa30.36■■■□□ 2.45
PCNX2-208ENST00000467336 PRG4Q92954 1404 aaPredicted RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 571.7 ms