RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 NISCHQ9Y2I1 1504 aa49.04■■■■■ 5.44
FAM53A-204ENST00000467215 ABCC9O60706 1549 aa44.46■■■■■ 4.71
FAM53A-204ENST00000467215 CCDC180Q9P1Z9 1646 aa44.31■■■■■ 4.68
FAM53A-204ENST00000467215 RB1CC1Q8TDY2 1594 aa42.22■■■■■ 4.35
FAM53A-204ENST00000467215 DNAJC5BQ9UF47 199 aa41.83■■■■■ 4.29
FAM53A-204ENST00000467215 NACADO15069 1562 aa41.81■■■■■ 4.28
FAM53A-204ENST00000467215 UNC13AQ9UPW8 1703 aa41.49■■■■■ 4.23
FAM53A-204ENST00000467215 DCAF8L2P0C7V8 631 aa41.29■■■■■ 4.2
FAM53A-204ENST00000467215 PABPN1Q86U42 306 aaKnown RBP eCLIP41.2■■■■■ 4.19
FAM53A-204ENST00000467215 MYO15BQ96JP2 1530 aa41.1■■■■■ 4.17
FAM53A-204ENST00000467215 BICRAQ9NZM4 1560 aa41.06■■■■■ 4.16
FAM53A-204ENST00000467215 ZCCHC6Q5VYS8 1495 aaKnown RBP40.65■■■■■ 4.1
FAM53A-204ENST00000467215 DCAF1Q9Y4B6 1507 aa40.48■■■■■ 4.07
FAM53A-204ENST00000467215 SHROOM4Q9ULL8 1493 aa40.39■■■■■ 4.06
FAM53A-204ENST00000467215 SCRIBQ14160 1630 aa40.34■■■■■ 4.05
FAM53A-204ENST00000467215 CC2D2AQ9P2K1 1620 aa40.21■■■■■ 4.03
FAM53A-204ENST00000467215 CECR2Q9BXF3 1484 aa40.06■■■■■ 4
FAM53A-204ENST00000467215 EIF4G1Q04637 1599 aaKnown RBP40.05■■■■■ 4
FAM53A-204ENST00000467215 DNAJC5Q9H3Z4 198 aa38.56■■■■□ 3.76
FAM53A-204ENST00000467215 NCAPD3P42695 1498 aa38.52■■■■□ 3.76
FAM53A-204ENST00000467215 SMARCA4P51532 1647 aa38.43■■■■□ 3.74
FAM53A-204ENST00000467215 CUX2O14529 1486 aa38.42■■■■□ 3.74
FAM53A-204ENST00000467215 ATAD2BQ9ULI0 1458 aa38.41■■■■□ 3.74
FAM53A-204ENST00000467215 ERCC6Q03468 1493 aa38.39■■■■□ 3.74
FAM53A-204ENST00000467215 HMGXB3Q12766 1538 aa38.36■■■■□ 3.73
FAM53A-204ENST00000467215 SMARCA2P51531 1590 aa38.33■■■■□ 3.73
FAM53A-204ENST00000467215 NESP48681 1621 aa38.14■■■■□ 3.7
FAM53A-204ENST00000467215 BAZ1AQ9NRL2 1556 aaPredicted RBP38.12■■■■□ 3.69
FAM53A-204ENST00000467215 BAZ1BQ9UIG0 1483 aaKnown RBP38.06■■■■□ 3.68
FAM53A-204ENST00000467215 PEG3Q9GZU2 1588 aa38.02■■■■□ 3.68
FAM53A-204ENST00000467215 THOC2Q8NI27 1593 aaKnown RBP37.94■■■■□ 3.66
FAM53A-204ENST00000467215 MROH2BQ7Z745 1585 aa37.83■■■■□ 3.65
FAM53A-204ENST00000467215 LAMC3Q9Y6N6 1575 aa37.83■■■■□ 3.65
FAM53A-204ENST00000467215 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
FAM53A-204ENST00000467215 PDS5BQ9NTI5 1447 aa37.47■■■■□ 3.59
FAM53A-204ENST00000467215 WIZO95785 1651 aa37.43■■■■□ 3.58
FAM53A-204ENST00000467215 CADPSQ9ULU8 1353 aa37.3■■■■□ 3.56
FAM53A-204ENST00000467215 MRC2Q9UBG0 1479 aa37.28■■■■□ 3.56
FAM53A-204ENST00000467215 WDR62O43379 1518 aa37.26■■■■□ 3.55
FAM53A-204ENST00000467215 CEP164Q9UPV0 1460 aa37.08■■■■□ 3.53
FAM53A-204ENST00000467215 FANCD2Q9BXW9 1451 aa36.99■■■■□ 3.51
FAM53A-204ENST00000467215 TOP2AP11388 1531 aaKnown RBP36.9■■■■□ 3.5
FAM53A-204ENST00000467215 CFTRP13569 1480 aa36.88■■■■□ 3.5
FAM53A-204ENST00000467215 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
FAM53A-204ENST00000467215 TRIM41Q8WV44 630 aa36.82■■■■□ 3.48
FAM53A-204ENST00000467215 PRDM2Q13029 1718 aa36.79■■■■□ 3.48
FAM53A-204ENST00000467215 URB2Q14146 1524 aaKnown RBP36.75■■■■□ 3.47
FAM53A-204ENST00000467215 OSCARQ8IYS5 282 aa36.4■■■■□ 3.42
FAM53A-204ENST00000467215 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
FAM53A-204ENST00000467215 ZNF608Q9ULD9 1512 aaPredicted RBP36.33■■■■□ 3.41
FAM53A-204ENST00000467215 IFT140Q96RY7 1462 aa36.3■■■■□ 3.4
FAM53A-204ENST00000467215 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
FAM53A-204ENST00000467215 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
FAM53A-204ENST00000467215 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
FAM53A-204ENST00000467215 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
FAM53A-204ENST00000467215 EIF4G3O43432 1585 aaKnown RBP36.25■■■■□ 3.39
FAM53A-204ENST00000467215 DNMBPQ6XZF7 1577 aa36.17■■■■□ 3.38
FAM53A-204ENST00000467215 ARHGEF11O15085 1522 aa36.09■■■■□ 3.37
FAM53A-204ENST00000467215 CHD1O14646 1710 aa36.08■■■■□ 3.37
FAM53A-204ENST00000467215 ABCC8Q09428 1581 aa36.07■■■■□ 3.37
FAM53A-204ENST00000467215 TARBP1Q13395 1621 aaKnown RBP36.05■■■■□ 3.36
FAM53A-204ENST00000467215 POLA1P09884 1462 aaPredicted RBP35.9■■■■□ 3.34
FAM53A-204ENST00000467215 AQRO60306 1485 aaKnown RBP eCLIP35.88■■■■□ 3.33
FAM53A-204ENST00000467215 RAD54L2Q9Y4B4 1467 aa35.73■■■■□ 3.31
FAM53A-204ENST00000467215 ARAP1Q96P48 1450 aa35.73■■■■□ 3.31
FAM53A-204ENST00000467215 FGD5Q6ZNL6 1462 aa35.64■■■■□ 3.3
FAM53A-204ENST00000467215 WDR97A6NE52 1622 aa35.64■■■■□ 3.3
FAM53A-204ENST00000467215 CYB5RLQ6IPT4 315 aa35.62■■■■□ 3.29
FAM53A-204ENST00000467215 FBLN2P98095 1184 aa35.61■■■■□ 3.29
FAM53A-204ENST00000467215 SNAPC4Q5SXM2 1469 aa35.6■■■■□ 3.29
FAM53A-204ENST00000467215 SOGA1O94964 1423 aa35.59■■■■□ 3.29
FAM53A-204ENST00000467215 TDRD9Q8NDG6 1382 aaKnown RBP35.58■■■■□ 3.29
FAM53A-204ENST00000467215 CUX1P39880 1505 aa35.57■■■■□ 3.29
FAM53A-204ENST00000467215 CLASP1Q7Z460 1538 aa35.55■■■■□ 3.28
FAM53A-204ENST00000467215 PBRM1Q86U86 1689 aa35.47■■■■□ 3.27
FAM53A-204ENST00000467215 SYNJ1O43426 1573 aa35.47■■■■□ 3.27
FAM53A-204ENST00000467215 MAGI1Q96QZ7 1491 aaPredicted RBP35.46■■■■□ 3.27
FAM53A-204ENST00000467215 GRIN2BQ13224 1484 aa35.4■■■■□ 3.26
FAM53A-204ENST00000467215 TRHP20396 242 aaPredicted RBP35.33■■■■□ 3.25
FAM53A-204ENST00000467215 SYNJ2O15056 1496 aa35.33■■■■□ 3.25
FAM53A-204ENST00000467215 ABCA5Q8WWZ7 1642 aa35.29■■■■□ 3.24
FAM53A-204ENST00000467215 CHMP7Q8WUX9 453 aaPredicted RBP35.27■■■■□ 3.24
FAM53A-204ENST00000467215 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
FAM53A-204ENST00000467215 ABCA10Q8WWZ4 1543 aa35.17■■■■□ 3.22
FAM53A-204ENST00000467215 ADAMTS12P58397 1594 aa35.05■■■■□ 3.2
FAM53A-204ENST00000467215 BIVM-ERCC5R4GMW8 1640 aa35.01■■■■□ 3.19
FAM53A-204ENST00000467215 GRIN2AQ12879 1464 aa34.99■■■■□ 3.19
FAM53A-204ENST00000467215 ERCC6L2Q5T890 1561 aa34.99■■■■□ 3.19
FAM53A-204ENST00000467215 CEP170Q5SW79 1584 aa34.96■■■■□ 3.19
FAM53A-204ENST00000467215 TOP2BQ02880 1626 aa34.93■■■■□ 3.18
FAM53A-204ENST00000467215 WRNQ14191 1432 aaPredicted RBP eCLIP34.89■■■■□ 3.18
FAM53A-204ENST00000467215 SUPT5HO00267 1087 aaKnown RBP34.87■■■■□ 3.17
FAM53A-204ENST00000467215 NUP160Q12769 1436 aa34.86■■■■□ 3.17
FAM53A-204ENST00000467215 SHROOM2Q13796 1616 aa34.85■■■■□ 3.17
FAM53A-204ENST00000467215 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
FAM53A-204ENST00000467215 FHAD1B1AJZ9 1412 aa34.74■■■■□ 3.15
FAM53A-204ENST00000467215 KIF13AQ9H1H9 1805 aa34.63■■■■□ 3.13
FAM53A-204ENST00000467215 RUSC2Q8N2Y8 1516 aa34.59■■■■□ 3.13
FAM53A-204ENST00000467215 PRG4Q92954 1404 aaPredicted RBP34.49■■■■□ 3.11
FAM53A-204ENST00000467215 AEBP2Q6ZN18 517 aaPredicted RBP34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms