RNA–Protein interactions for RNA: ENST00000467147.3

RN7SL542P-201, Transcript of RNA, 7SL, cytoplasmic 542, pseudogene, humanhuman

BASIC

Gene RN7SL542P, Length 294 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL542P-201ENST00000467147 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
RN7SL542P-201ENST00000467147 ABCC9O60706 1549 aa10.12□□□□□ -0.79
RN7SL542P-201ENST00000467147 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
RN7SL542P-201ENST00000467147 CCDC180Q9P1Z9 1646 aa9.64□□□□□ -0.87
RN7SL542P-201ENST00000467147 RB1CC1Q8TDY2 1594 aa9.37□□□□□ -0.91
RN7SL542P-201ENST00000467147 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
RN7SL542P-201ENST00000467147 PABPN1Q86U42 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
RN7SL542P-201ENST00000467147 UNC13AQ9UPW8 1703 aa9.27□□□□□ -0.93
RN7SL542P-201ENST00000467147 BICRAQ9NZM4 1560 aa9.2□□□□□ -0.94
RN7SL542P-201ENST00000467147 NACADO15069 1562 aa9.18□□□□□ -0.94
RN7SL542P-201ENST00000467147 CECR2Q9BXF3 1484 aa9.14□□□□□ -0.95
RN7SL542P-201ENST00000467147 CC2D2AQ9P2K1 1620 aa9.12□□□□□ -0.95
RN7SL542P-201ENST00000467147 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
RN7SL542P-201ENST00000467147 EIF4G1Q04637 1599 aaKnown RBP8.97□□□□□ -0.97
RN7SL542P-201ENST00000467147 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
RN7SL542P-201ENST00000467147 MYO15BQ96JP2 1530 aa8.88□□□□□ -0.99
RN7SL542P-201ENST00000467147 CUX2O14529 1486 aa8.84□□□□□ -0.99
RN7SL542P-201ENST00000467147 SCRIBQ14160 1630 aa8.82□□□□□ -1
RN7SL542P-201ENST00000467147 TRIM41Q8WV44 630 aa8.8□□□□□ -1
RN7SL542P-201ENST00000467147 ERCC6Q03468 1493 aa8.72□□□□□ -1.01
RN7SL542P-201ENST00000467147 ZCCHC6Q5VYS8 1495 aaKnown RBP8.64□□□□□ -1.03
RN7SL542P-201ENST00000467147 DCAF1Q9Y4B6 1507 aa8.62□□□□□ -1.03
RN7SL542P-201ENST00000467147 NESP48681 1621 aa8.6□□□□□ -1.03
RN7SL542P-201ENST00000467147 THOC2Q8NI27 1593 aaKnown RBP8.59□□□□□ -1.03
RN7SL542P-201ENST00000467147 SMARCA2P51531 1590 aa8.51□□□□□ -1.05
RN7SL542P-201ENST00000467147 NCAPD3P42695 1498 aa8.49□□□□□ -1.05
RN7SL542P-201ENST00000467147 KIF21AQ7Z4S6 1674 aa8.48□□□□□ -1.05
RN7SL542P-201ENST00000467147 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
RN7SL542P-201ENST00000467147 ATAD2BQ9ULI0 1458 aa8.43□□□□□ -1.06
RN7SL542P-201ENST00000467147 HMGXB3Q12766 1538 aa8.4□□□□□ -1.06
RN7SL542P-201ENST00000467147 RIMBP3CA6NJZ7 1639 aa8.38□□□□□ -1.07
RN7SL542P-201ENST00000467147 RIMBP3BA6NNM3 1639 aa8.38□□□□□ -1.07
RN7SL542P-201ENST00000467147 RIMBP3Q9UFD9 1639 aa8.38□□□□□ -1.07
RN7SL542P-201ENST00000467147 LAMC3Q9Y6N6 1575 aa8.37□□□□□ -1.07
RN7SL542P-201ENST00000467147 SMARCA4P51532 1647 aa8.33□□□□□ -1.08
RN7SL542P-201ENST00000467147 OSCARQ8IYS5 282 aa8.33□□□□□ -1.08
RN7SL542P-201ENST00000467147 WDR62O43379 1518 aa8.33□□□□□ -1.08
RN7SL542P-201ENST00000467147 MRC2Q9UBG0 1479 aa8.32□□□□□ -1.08
RN7SL542P-201ENST00000467147 BAZ1BQ9UIG0 1483 aaKnown RBP8.32□□□□□ -1.08
RN7SL542P-201ENST00000467147 PDS5BQ9NTI5 1447 aa8.31□□□□□ -1.08
RN7SL542P-201ENST00000467147 AEBP2Q6ZN18 517 aaPredicted RBP8.31□□□□□ -1.08
RN7SL542P-201ENST00000467147 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
RN7SL542P-201ENST00000467147 TRHP20396 242 aaPredicted RBP8.25□□□□□ -1.09
RN7SL542P-201ENST00000467147 PEG3Q9GZU2 1588 aa8.22□□□□□ -1.09
RN7SL542P-201ENST00000467147 CYB5RLQ6IPT4 315 aa8.21□□□□□ -1.1
RN7SL542P-201ENST00000467147 CADPSQ9ULU8 1353 aa8.21□□□□□ -1.1
RN7SL542P-201ENST00000467147 ARAP1Q96P48 1450 aa8.19□□□□□ -1.1
RN7SL542P-201ENST00000467147 CEP164Q9UPV0 1460 aa8.19□□□□□ -1.1
RN7SL542P-201ENST00000467147 URB2Q14146 1524 aaKnown RBP8.15□□□□□ -1.1
RN7SL542P-201ENST00000467147 FANCD2Q9BXW9 1451 aa8.15□□□□□ -1.1
RN7SL542P-201ENST00000467147 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
RN7SL542P-201ENST00000467147 ZNF608Q9ULD9 1512 aaPredicted RBP8.13□□□□□ -1.11
RN7SL542P-201ENST00000467147 ILDR1Q86SU0 546 aaPredicted RBP8.12□□□□□ -1.11
RN7SL542P-201ENST00000467147 CHD1O14646 1710 aa8.11□□□□□ -1.11
RN7SL542P-201ENST00000467147 EIF4G3O43432 1585 aaKnown RBP8.06□□□□□ -1.12
RN7SL542P-201ENST00000467147 WIZO95785 1651 aa8.05□□□□□ -1.12
RN7SL542P-201ENST00000467147 CFTRP13569 1480 aa8.03□□□□□ -1.12
RN7SL542P-201ENST00000467147 RSF1Q96T23 1441 aaPredicted RBP8.03□□□□□ -1.12
RN7SL542P-201ENST00000467147 IFT140Q96RY7 1462 aa8.02□□□□□ -1.13
RN7SL542P-201ENST00000467147 AQRO60306 1485 aaKnown RBP eCLIP7.98□□□□□ -1.13
RN7SL542P-201ENST00000467147 CLASP1Q7Z460 1538 aa7.98□□□□□ -1.13
RN7SL542P-201ENST00000467147 FBLN2P98095 1184 aa7.97□□□□□ -1.13
RN7SL542P-201ENST00000467147 PRDM2Q13029 1718 aa7.96□□□□□ -1.14
RN7SL542P-201ENST00000467147 TOPBP1Q92547 1522 aa7.96□□□□□ -1.14
RN7SL542P-201ENST00000467147 TARBP1Q13395 1621 aaKnown RBP7.94□□□□□ -1.14
RN7SL542P-201ENST00000467147 KIF13AQ9H1H9 1805 aa7.89□□□□□ -1.15
RN7SL542P-201ENST00000467147 GAPVD1Q14C86 1478 aa7.89□□□□□ -1.15
RN7SL542P-201ENST00000467147 KDM4FA0A1W2PPD8 638 aa7.89□□□□□ -1.15
RN7SL542P-201ENST00000467147 SNAPC4Q5SXM2 1469 aa7.88□□□□□ -1.15
RN7SL542P-201ENST00000467147 ERCC6L2Q5T890 1561 aa7.88□□□□□ -1.15
RN7SL542P-201ENST00000467147 DNMBPQ6XZF7 1577 aa7.88□□□□□ -1.15
RN7SL542P-201ENST00000467147 SYNJ1O43426 1573 aa7.87□□□□□ -1.15
RN7SL542P-201ENST00000467147 TOP2AP11388 1531 aaKnown RBP7.86□□□□□ -1.15
RN7SL542P-201ENST00000467147 RAD54L2Q9Y4B4 1467 aa7.86□□□□□ -1.15
RN7SL542P-201ENST00000467147 POLA1P09884 1462 aaPredicted RBP7.85□□□□□ -1.15
RN7SL542P-201ENST00000467147 TDRD9Q8NDG6 1382 aaKnown RBP7.84□□□□□ -1.15
RN7SL542P-201ENST00000467147 ABCC8Q09428 1581 aa7.8□□□□□ -1.16
RN7SL542P-201ENST00000467147 CHMP7Q8WUX9 453 aaPredicted RBP7.8□□□□□ -1.16
RN7SL542P-201ENST00000467147 CCDC88BA6NC98 1476 aa7.79□□□□□ -1.16
RN7SL542P-201ENST00000467147 MAGI1Q96QZ7 1491 aaPredicted RBP7.79□□□□□ -1.16
RN7SL542P-201ENST00000467147 HECW2Q9P2P5 1572 aa7.79□□□□□ -1.16
RN7SL542P-201ENST00000467147 SYNJ2O15056 1496 aa7.78□□□□□ -1.16
RN7SL542P-201ENST00000467147 SOGA1O94964 1423 aa7.77□□□□□ -1.17
RN7SL542P-201ENST00000467147 KDM6BO15054 1643 aa7.76□□□□□ -1.17
RN7SL542P-201ENST00000467147 PBRM1Q86U86 1689 aa7.76□□□□□ -1.17
RN7SL542P-201ENST00000467147 CEP170Q5SW79 1584 aa7.76□□□□□ -1.17
RN7SL542P-201ENST00000467147 GRIN2BQ13224 1484 aa7.75□□□□□ -1.17
RN7SL542P-201ENST00000467147 FGD5Q6ZNL6 1462 aa7.74□□□□□ -1.17
RN7SL542P-201ENST00000467147 WDR97A6NE52 1622 aa7.74□□□□□ -1.17
RN7SL542P-201ENST00000467147 DIP2BQ9P265 1576 aa7.73□□□□□ -1.17
RN7SL542P-201ENST00000467147 ADGRL1O94910 1474 aa7.73□□□□□ -1.17
RN7SL542P-201ENST00000467147 TSPOAP1O95153 1857 aa7.72□□□□□ -1.17
RN7SL542P-201ENST00000467147 ABCC10Q5T3U5 1492 aa7.72□□□□□ -1.17
RN7SL542P-201ENST00000467147 SHROOM2Q13796 1616 aa7.71□□□□□ -1.17
RN7SL542P-201ENST00000467147 FAM69CQ0P6D2 419 aa7.71□□□□□ -1.18
RN7SL542P-201ENST00000467147 FBXO41Q8TF61 875 aa7.69□□□□□ -1.18
RN7SL542P-201ENST00000467147 CUX1P39880 1505 aa7.68□□□□□ -1.18
RN7SL542P-201ENST00000467147 GRIN2AQ12879 1464 aa7.68□□□□□ -1.18
RN7SL542P-201ENST00000467147 LMTK3Q96Q04 1460 aa7.67□□□□□ -1.18
RN7SL542P-201ENST00000467147 ABCA5Q8WWZ7 1642 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms