RNA–Protein interactions for RNA: ENST00000467078.5

APBB3-206, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 1,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-206ENST00000467078 NISCHQ9Y2I1 1504 aa35.55■■■■□ 3.28
APBB3-206ENST00000467078 CCDC180Q9P1Z9 1646 aa30.92■■■□□ 2.54
APBB3-206ENST00000467078 ZCCHC6Q5VYS8 1495 aaKnown RBP29.9■■■□□ 2.38
APBB3-206ENST00000467078 DCAF1Q9Y4B6 1507 aa29.39■■■□□ 2.3
APBB3-206ENST00000467078 DCAF8L2P0C7V8 631 aa29.24■■■□□ 2.27
APBB3-206ENST00000467078 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.25
APBB3-206ENST00000467078 ABCC9O60706 1549 aa28.99■■■□□ 2.23
APBB3-206ENST00000467078 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
APBB3-206ENST00000467078 NACADO15069 1562 aa28.71■■■□□ 2.19
APBB3-206ENST00000467078 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
APBB3-206ENST00000467078 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
APBB3-206ENST00000467078 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
APBB3-206ENST00000467078 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
APBB3-206ENST00000467078 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
APBB3-206ENST00000467078 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
APBB3-206ENST00000467078 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
APBB3-206ENST00000467078 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
APBB3-206ENST00000467078 BAZ1AQ9NRL2 1556 aaPredicted RBP27.42■■□□□ 1.98
APBB3-206ENST00000467078 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
APBB3-206ENST00000467078 WIZO95785 1651 aa27.3■■□□□ 1.96
APBB3-206ENST00000467078 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
APBB3-206ENST00000467078 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
APBB3-206ENST00000467078 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
APBB3-206ENST00000467078 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.9
APBB3-206ENST00000467078 SMARCA2P51531 1590 aa26.76■■□□□ 1.87
APBB3-206ENST00000467078 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
APBB3-206ENST00000467078 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
APBB3-206ENST00000467078 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
APBB3-206ENST00000467078 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
APBB3-206ENST00000467078 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
APBB3-206ENST00000467078 HMGXB3Q12766 1538 aa26.48■■□□□ 1.83
APBB3-206ENST00000467078 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
APBB3-206ENST00000467078 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
APBB3-206ENST00000467078 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
APBB3-206ENST00000467078 LOC105371045A0A1W2PR82 267 aa26.06■■□□□ 1.76
APBB3-206ENST00000467078 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.76
APBB3-206ENST00000467078 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
APBB3-206ENST00000467078 CFTRP13569 1480 aa25.96■■□□□ 1.75
APBB3-206ENST00000467078 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
APBB3-206ENST00000467078 SYNJ1O43426 1573 aa25.93■■□□□ 1.74
APBB3-206ENST00000467078 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
APBB3-206ENST00000467078 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
APBB3-206ENST00000467078 BIVM-ERCC5R4GMW8 1640 aa25.8■■□□□ 1.72
APBB3-206ENST00000467078 SOGA1O94964 1423 aa25.77■■□□□ 1.72
APBB3-206ENST00000467078 EEA1Q15075 1411 aa25.76■■□□□ 1.71
APBB3-206ENST00000467078 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
APBB3-206ENST00000467078 CUX1P39880 1505 aa25.68■■□□□ 1.7
APBB3-206ENST00000467078 HRCP23327 699 aa25.63■■□□□ 1.69
APBB3-206ENST00000467078 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
APBB3-206ENST00000467078 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
APBB3-206ENST00000467078 LAMC3Q9Y6N6 1575 aa25.57■■□□□ 1.68
APBB3-206ENST00000467078 NESP48681 1621 aa25.55■■□□□ 1.68
APBB3-206ENST00000467078 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
APBB3-206ENST00000467078 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
APBB3-206ENST00000467078 KIF21BO75037 1637 aa25.45■■□□□ 1.67
APBB3-206ENST00000467078 GOLGA3Q08378 1498 aa25.42■■□□□ 1.66
APBB3-206ENST00000467078 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
APBB3-206ENST00000467078 TNIKQ9UKE5 1360 aa25.39■■□□□ 1.66
APBB3-206ENST00000467078 PCGF6Q9BYE7 350 aa25.38■■□□□ 1.65
APBB3-206ENST00000467078 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
APBB3-206ENST00000467078 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
APBB3-206ENST00000467078 KIF27Q86VH2 1401 aa25.33■■□□□ 1.65
APBB3-206ENST00000467078 PDS5BQ9NTI5 1447 aa25.33■■□□□ 1.65
APBB3-206ENST00000467078 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
APBB3-206ENST00000467078 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
APBB3-206ENST00000467078 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
APBB3-206ENST00000467078 CEP162Q5TB80 1403 aa25.27■■□□□ 1.64
APBB3-206ENST00000467078 RAPGEF2Q9Y4G8 1499 aa25.24■■□□□ 1.63
APBB3-206ENST00000467078 PRXQ9BXM0 1461 aa25.23■■□□□ 1.63
APBB3-206ENST00000467078 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
APBB3-206ENST00000467078 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
APBB3-206ENST00000467078 CUX2O14529 1486 aa25.22■■□□□ 1.63
APBB3-206ENST00000467078 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
APBB3-206ENST00000467078 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.61
APBB3-206ENST00000467078 RAD54L2Q9Y4B4 1467 aa25.12■■□□□ 1.61
APBB3-206ENST00000467078 IGF1RP08069 1367 aa25.09■■□□□ 1.61
APBB3-206ENST00000467078 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
APBB3-206ENST00000467078 TRIM26Q12899 539 aaPredicted RBP25.06■■□□□ 1.6
APBB3-206ENST00000467078 CLIP1P30622 1438 aa25.01■■□□□ 1.59
APBB3-206ENST00000467078 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
APBB3-206ENST00000467078 CARMIL1Q5VZK9 1371 aa24.97■■□□□ 1.59
APBB3-206ENST00000467078 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
APBB3-206ENST00000467078 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
APBB3-206ENST00000467078 CUL7Q14999 1698 aa24.91■■□□□ 1.58
APBB3-206ENST00000467078 WDR62O43379 1518 aa24.87■■□□□ 1.57
APBB3-206ENST00000467078 PPARGC1BQ86YN6 1023 aaKnown RBP24.86■■□□□ 1.57
APBB3-206ENST00000467078 GAPVD1Q14C86 1478 aa24.84■■□□□ 1.57
APBB3-206ENST00000467078 TDRD9Q8NDG6 1382 aaKnown RBP24.84■■□□□ 1.57
APBB3-206ENST00000467078 VPS8Q8N3P4 1428 aa24.83■■□□□ 1.57
APBB3-206ENST00000467078 ERCC6Q03468 1493 aa24.81■■□□□ 1.56
APBB3-206ENST00000467078 RANGAP1P46060 587 aaPredicted RBP24.79■■□□□ 1.56
APBB3-206ENST00000467078 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
APBB3-206ENST00000467078 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
APBB3-206ENST00000467078 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
APBB3-206ENST00000467078 IFT140Q96RY7 1462 aa24.73■■□□□ 1.55
APBB3-206ENST00000467078 ARHGAP35Q9NRY4 1499 aa24.71■■□□□ 1.55
APBB3-206ENST00000467078 CTTNBP2Q8WZ74 1663 aa24.71■■□□□ 1.55
APBB3-206ENST00000467078 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.542e-6■■■■■ 39.8
APBB3-206ENST00000467078 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.53
APBB3-206ENST00000467078 ZNF608Q9ULD9 1512 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms