RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
LAMP3-202ENST00000466939 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
LAMP3-202ENST00000466939 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
LAMP3-202ENST00000466939 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
LAMP3-202ENST00000466939 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
LAMP3-202ENST00000466939 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.2
LAMP3-202ENST00000466939 ABCC9O60706 1549 aa22.49■■□□□ 1.19
LAMP3-202ENST00000466939 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
LAMP3-202ENST00000466939 MYO15BQ96JP2 1530 aa22.27■■□□□ 1.16
LAMP3-202ENST00000466939 NACADO15069 1562 aa22.16■■□□□ 1.14
LAMP3-202ENST00000466939 RB1CC1Q8TDY2 1594 aa21.97■■□□□ 1.11
LAMP3-202ENST00000466939 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
LAMP3-202ENST00000466939 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
LAMP3-202ENST00000466939 UNC13AQ9UPW8 1703 aa21.48■■□□□ 1.03
LAMP3-202ENST00000466939 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
LAMP3-202ENST00000466939 BICRAQ9NZM4 1560 aa21.27■□□□□ 0.99
LAMP3-202ENST00000466939 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
LAMP3-202ENST00000466939 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
LAMP3-202ENST00000466939 PABPN1Q86U42 306 aaKnown RBP eCLIP21.22■□□□□ 0.99
LAMP3-202ENST00000466939 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
LAMP3-202ENST00000466939 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
LAMP3-202ENST00000466939 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
LAMP3-202ENST00000466939 WIZO95785 1651 aa20.97■□□□□ 0.95
LAMP3-202ENST00000466939 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
LAMP3-202ENST00000466939 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
LAMP3-202ENST00000466939 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
LAMP3-202ENST00000466939 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
LAMP3-202ENST00000466939 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
LAMP3-202ENST00000466939 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
LAMP3-202ENST00000466939 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
LAMP3-202ENST00000466939 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
LAMP3-202ENST00000466939 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
LAMP3-202ENST00000466939 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.84
LAMP3-202ENST00000466939 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
LAMP3-202ENST00000466939 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
LAMP3-202ENST00000466939 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.79
LAMP3-202ENST00000466939 CFTRP13569 1480 aa20■□□□□ 0.79
LAMP3-202ENST00000466939 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
LAMP3-202ENST00000466939 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
LAMP3-202ENST00000466939 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
LAMP3-202ENST00000466939 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
LAMP3-202ENST00000466939 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
LAMP3-202ENST00000466939 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
LAMP3-202ENST00000466939 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
LAMP3-202ENST00000466939 SOGA1O94964 1423 aa19.78■□□□□ 0.76
LAMP3-202ENST00000466939 EEA1Q15075 1411 aa19.77■□□□□ 0.76
LAMP3-202ENST00000466939 CUX1P39880 1505 aa19.76■□□□□ 0.75
LAMP3-202ENST00000466939 NESP48681 1621 aa19.75■□□□□ 0.75
LAMP3-202ENST00000466939 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
LAMP3-202ENST00000466939 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
LAMP3-202ENST00000466939 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
LAMP3-202ENST00000466939 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
LAMP3-202ENST00000466939 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
LAMP3-202ENST00000466939 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
LAMP3-202ENST00000466939 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
LAMP3-202ENST00000466939 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
LAMP3-202ENST00000466939 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
LAMP3-202ENST00000466939 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.72
LAMP3-202ENST00000466939 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
LAMP3-202ENST00000466939 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
LAMP3-202ENST00000466939 GOLGA3Q08378 1498 aa19.52■□□□□ 0.72
LAMP3-202ENST00000466939 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
LAMP3-202ENST00000466939 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
LAMP3-202ENST00000466939 KIF21BO75037 1637 aa19.51■□□□□ 0.71
LAMP3-202ENST00000466939 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
LAMP3-202ENST00000466939 CUX2O14529 1486 aa19.46■□□□□ 0.71
LAMP3-202ENST00000466939 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
LAMP3-202ENST00000466939 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
LAMP3-202ENST00000466939 POLA1P09884 1462 aaPredicted RBP19.43■□□□□ 0.7
LAMP3-202ENST00000466939 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
LAMP3-202ENST00000466939 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
LAMP3-202ENST00000466939 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
LAMP3-202ENST00000466939 RAPGEF2Q9Y4G8 1499 aa19.37■□□□□ 0.69
LAMP3-202ENST00000466939 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
LAMP3-202ENST00000466939 PRXQ9BXM0 1461 aa19.36■□□□□ 0.69
LAMP3-202ENST00000466939 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
LAMP3-202ENST00000466939 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
LAMP3-202ENST00000466939 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
LAMP3-202ENST00000466939 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
LAMP3-202ENST00000466939 IGF1RP08069 1367 aa19.29■□□□□ 0.68
LAMP3-202ENST00000466939 WDR62O43379 1518 aa19.25■□□□□ 0.67
LAMP3-202ENST00000466939 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
LAMP3-202ENST00000466939 CLIP1P30622 1438 aa19.21■□□□□ 0.67
LAMP3-202ENST00000466939 TARBP1Q13395 1621 aaKnown RBP19.2■□□□□ 0.66
LAMP3-202ENST00000466939 ABCA5Q8WWZ7 1642 aa19.2■□□□□ 0.66
LAMP3-202ENST00000466939 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
LAMP3-202ENST00000466939 CUL7Q14999 1698 aa19.17■□□□□ 0.66
LAMP3-202ENST00000466939 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
LAMP3-202ENST00000466939 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
LAMP3-202ENST00000466939 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
LAMP3-202ENST00000466939 IFT140Q96RY7 1462 aa19.14■□□□□ 0.65
LAMP3-202ENST00000466939 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
LAMP3-202ENST00000466939 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
LAMP3-202ENST00000466939 TRIM26Q12899 539 aaPredicted RBP19.05■□□□□ 0.64
LAMP3-202ENST00000466939 VPS8Q8N3P4 1428 aa19.04■□□□□ 0.64
LAMP3-202ENST00000466939 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.64
LAMP3-202ENST00000466939 GRIN2BQ13224 1484 aa19.02■□□□□ 0.63
LAMP3-202ENST00000466939 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
LAMP3-202ENST00000466939 ARAP1Q96P48 1450 aa19■□□□□ 0.63
LAMP3-202ENST00000466939 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms