RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 NISCHQ9Y2I1 1504 aa62.14■■■■■ 7.54
SDF2L1-202ENST00000466935 CCDC180Q9P1Z9 1646 aa55.64■■■■■ 6.5
SDF2L1-202ENST00000466935 ABCC9O60706 1549 aa54.88■■■■■ 6.38
SDF2L1-202ENST00000466935 RB1CC1Q8TDY2 1594 aa52.64■■■■■ 6.02
SDF2L1-202ENST00000466935 NACADO15069 1562 aa52.44■■■■■ 5.99
SDF2L1-202ENST00000466935 MYO15BQ96JP2 1530 aa51.98■■■■■ 5.91
SDF2L1-202ENST00000466935 DCAF8L2P0C7V8 631 aa51.96■■■■■ 5.91
SDF2L1-202ENST00000466935 ZCCHC6Q5VYS8 1495 aaKnown RBP51.63■■■■■ 5.86
SDF2L1-202ENST00000466935 DCAF1Q9Y4B6 1507 aa51.48■■■■■ 5.83
SDF2L1-202ENST00000466935 UNC13AQ9UPW8 1703 aa51.43■■■■■ 5.82
SDF2L1-202ENST00000466935 PABPN1Q86U42 306 aaKnown RBP eCLIP51.09■■■■■ 5.77
SDF2L1-202ENST00000466935 BICRAQ9NZM4 1560 aa51.03■■■■■ 5.76
SDF2L1-202ENST00000466935 DNAJC5BQ9UF47 199 aa50.93■■■■■ 5.74
SDF2L1-202ENST00000466935 SHROOM4Q9ULL8 1493 aa50.59■■■■■ 5.69
SDF2L1-202ENST00000466935 SCRIBQ14160 1630 aa50.55■■■■■ 5.68
SDF2L1-202ENST00000466935 EIF4G1Q04637 1599 aaKnown RBP49.74■■■■■ 5.55
SDF2L1-202ENST00000466935 CC2D2AQ9P2K1 1620 aa49.69■■■■■ 5.55
SDF2L1-202ENST00000466935 CECR2Q9BXF3 1484 aa49.44■■■■■ 5.51
SDF2L1-202ENST00000466935 SMARCA4P51532 1647 aa48.36■■■■■ 5.33
SDF2L1-202ENST00000466935 NCAPD3P42695 1498 aa48.36■■■■■ 5.33
SDF2L1-202ENST00000466935 ATAD2BQ9ULI0 1458 aa48.25■■■■■ 5.31
SDF2L1-202ENST00000466935 BAZ1AQ9NRL2 1556 aaPredicted RBP48.23■■■■■ 5.31
SDF2L1-202ENST00000466935 SMARCA2P51531 1590 aa48.22■■■■■ 5.31
SDF2L1-202ENST00000466935 HMGXB3Q12766 1538 aa48.1■■■■■ 5.29
SDF2L1-202ENST00000466935 PEG3Q9GZU2 1588 aa47.97■■■■■ 5.27
SDF2L1-202ENST00000466935 MROH2BQ7Z745 1585 aa47.82■■■■■ 5.25
SDF2L1-202ENST00000466935 BAZ1BQ9UIG0 1483 aaKnown RBP47.81■■■■■ 5.24
SDF2L1-202ENST00000466935 ERCC6Q03468 1493 aa47.4■■■■■ 5.18
SDF2L1-202ENST00000466935 NESP48681 1621 aa47.29■■■■■ 5.16
SDF2L1-202ENST00000466935 WIZO95785 1651 aa47.27■■■■■ 5.16
SDF2L1-202ENST00000466935 CUX2O14529 1486 aa47.23■■■■■ 5.15
SDF2L1-202ENST00000466935 LAMC3Q9Y6N6 1575 aa47.22■■■■■ 5.15
SDF2L1-202ENST00000466935 RSF1Q96T23 1441 aaPredicted RBP47.04■■■■■ 5.12
SDF2L1-202ENST00000466935 PDS5BQ9NTI5 1447 aa46.88■■■■■ 5.1
SDF2L1-202ENST00000466935 CADPSQ9ULU8 1353 aa46.87■■■■■ 5.09
SDF2L1-202ENST00000466935 THOC2Q8NI27 1593 aaKnown RBP46.83■■■■■ 5.09
SDF2L1-202ENST00000466935 KIF21AQ7Z4S6 1674 aa46.8■■■■■ 5.08
SDF2L1-202ENST00000466935 TOP2AP11388 1531 aaKnown RBP46.79■■■■■ 5.08
SDF2L1-202ENST00000466935 CFTRP13569 1480 aa46.49■■■■■ 5.03
SDF2L1-202ENST00000466935 DNAJC5Q9H3Z4 198 aa46.48■■■■■ 5.03
SDF2L1-202ENST00000466935 MRC2Q9UBG0 1479 aa46.44■■■■■ 5.02
SDF2L1-202ENST00000466935 CEP164Q9UPV0 1460 aa46.36■■■■■ 5.01
SDF2L1-202ENST00000466935 WDR62O43379 1518 aa46.33■■■■■ 5.01
SDF2L1-202ENST00000466935 FANCD2Q9BXW9 1451 aa46.33■■■■■ 5.01
SDF2L1-202ENST00000466935 CCDC88BA6NC98 1476 aa46.19■■■■■ 4.98
SDF2L1-202ENST00000466935 PRDM2Q13029 1718 aa46.17■■■■■ 4.98
SDF2L1-202ENST00000466935 URB2Q14146 1524 aaKnown RBP45.9■■■■■ 4.94
SDF2L1-202ENST00000466935 ABCC8Q09428 1581 aa45.56■■■■■ 4.88
SDF2L1-202ENST00000466935 TOPBP1Q92547 1522 aa45.52■■■■■ 4.88
SDF2L1-202ENST00000466935 DNMBPQ6XZF7 1577 aa45.45■■■■■ 4.87
SDF2L1-202ENST00000466935 IFT140Q96RY7 1462 aa45.42■■■■■ 4.86
SDF2L1-202ENST00000466935 ZNF608Q9ULD9 1512 aaPredicted RBP45.2■■■■■ 4.83
SDF2L1-202ENST00000466935 SUPT5HO00267 1087 aaKnown RBP45.19■■■■■ 4.82
SDF2L1-202ENST00000466935 TARBP1Q13395 1621 aaKnown RBP45.12■■■■■ 4.81
SDF2L1-202ENST00000466935 POLA1P09884 1462 aaPredicted RBP45.09■■■■■ 4.81
SDF2L1-202ENST00000466935 EIF4G3O43432 1585 aaKnown RBP45.07■■■■■ 4.8
SDF2L1-202ENST00000466935 OSCARQ8IYS5 282 aa45.06■■■■■ 4.8
SDF2L1-202ENST00000466935 CUX1P39880 1505 aa44.92■■■■■ 4.78
SDF2L1-202ENST00000466935 SOGA1O94964 1423 aa44.87■■■■■ 4.77
SDF2L1-202ENST00000466935 FGD5Q6ZNL6 1462 aa44.86■■■■■ 4.77
SDF2L1-202ENST00000466935 AQRO60306 1485 aaKnown RBP eCLIP44.85■■■■■ 4.777e-14■■■■■ 38.4
SDF2L1-202ENST00000466935 RAD54L2Q9Y4B4 1467 aa44.83■■■■■ 4.77
SDF2L1-202ENST00000466935 WDR97A6NE52 1622 aa44.83■■■■■ 4.77
SDF2L1-202ENST00000466935 TDRD9Q8NDG6 1382 aaKnown RBP44.65■■■■■ 4.74
SDF2L1-202ENST00000466935 CHD1O14646 1710 aa44.62■■■■■ 4.73
SDF2L1-202ENST00000466935 TRIM41Q8WV44 630 aa44.53■■■■■ 4.72
SDF2L1-202ENST00000466935 GRIN2BQ13224 1484 aa44.47■■■■■ 4.71
SDF2L1-202ENST00000466935 MAGI1Q96QZ7 1491 aaPredicted RBP44.46■■■■■ 4.71
SDF2L1-202ENST00000466935 ABCA10Q8WWZ4 1543 aa44.45■■■■■ 4.71
SDF2L1-202ENST00000466935 SNAPC4Q5SXM2 1469 aa44.45■■■■■ 4.71
SDF2L1-202ENST00000466935 RIMBP3CA6NJZ7 1639 aa44.44■■■■■ 4.7
SDF2L1-202ENST00000466935 RIMBP3BA6NNM3 1639 aa44.44■■■■■ 4.7
SDF2L1-202ENST00000466935 RIMBP3Q9UFD9 1639 aa44.44■■■■■ 4.7
SDF2L1-202ENST00000466935 BIVM-ERCC5R4GMW8 1640 aa44.42■■■■■ 4.7
SDF2L1-202ENST00000466935 TOP2BQ02880 1626 aa44.41■■■■■ 4.7
SDF2L1-202ENST00000466935 WRNQ14191 1432 aaPredicted RBP eCLIP44.38■■■■■ 4.69
SDF2L1-202ENST00000466935 FBLN2P98095 1184 aa44.37■■■■■ 4.69
SDF2L1-202ENST00000466935 ARHGEF11O15085 1522 aa44.36■■■■■ 4.69
SDF2L1-202ENST00000466935 GAPVD1Q14C86 1478 aa44.36■■■■■ 4.69
SDF2L1-202ENST00000466935 PBRM1Q86U86 1689 aa44.35■■■■■ 4.69
SDF2L1-202ENST00000466935 ABCA5Q8WWZ7 1642 aa44.35■■■■■ 4.69
SDF2L1-202ENST00000466935 SYNJ1O43426 1573 aa44.3■■■■■ 4.68
SDF2L1-202ENST00000466935 SYNJ2O15056 1496 aa44.27■■■■■ 4.68
SDF2L1-202ENST00000466935 CHMP7Q8WUX9 453 aaPredicted RBP44.22■■■■■ 4.67
SDF2L1-202ENST00000466935 CLASP1Q7Z460 1538 aa44.15■■■■■ 4.66
SDF2L1-202ENST00000466935 ADAMTS12P58397 1594 aa43.95■■■■■ 4.63
SDF2L1-202ENST00000466935 ARAP1Q96P48 1450 aa43.95■■■■■ 4.63
SDF2L1-202ENST00000466935 ERICH3Q5RHP9 1530 aa43.94■■■■■ 4.62
SDF2L1-202ENST00000466935 GRIN2AQ12879 1464 aa43.89■■■■■ 4.62
SDF2L1-202ENST00000466935 CYB5RLQ6IPT4 315 aa43.89■■■■■ 4.62
SDF2L1-202ENST00000466935 FHAD1B1AJZ9 1412 aa43.84■■■■■ 4.61
SDF2L1-202ENST00000466935 NUP160Q12769 1436 aa43.74■■■■■ 4.59
SDF2L1-202ENST00000466935 CEP170Q5SW79 1584 aa43.68■■■■■ 4.58
SDF2L1-202ENST00000466935 KIF27Q86VH2 1401 aa43.53■■■■■ 4.56
SDF2L1-202ENST00000466935 SHROOM2Q13796 1616 aa43.52■■■■■ 4.56
SDF2L1-202ENST00000466935 CUL7Q14999 1698 aa43.42■■■■■ 4.54
SDF2L1-202ENST00000466935 IGF1RP08069 1367 aa43.4■■■■■ 4.54
SDF2L1-202ENST00000466935 ERCC6L2Q5T890 1561 aa43.39■■■■■ 4.54
SDF2L1-202ENST00000466935 RUSC2Q8N2Y8 1516 aa43.32■■■■■ 4.53
SDF2L1-202ENST00000466935 JPH4Q96JJ6 628 aa43.22■■■■■ 4.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms