RNA–Protein interactions for RNA: ENST00000466925.4

ARHGEF9-206, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 3

Gene ARHGEF9, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-206ENST00000466925 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
ARHGEF9-206ENST00000466925 ABCC9O60706 1549 aa25.07■■□□□ 1.6
ARHGEF9-206ENST00000466925 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
ARHGEF9-206ENST00000466925 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
ARHGEF9-206ENST00000466925 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
ARHGEF9-206ENST00000466925 NACADO15069 1562 aa23.54■■□□□ 1.36
ARHGEF9-206ENST00000466925 DCAF8L2P0C7V8 631 aa23.51■■□□□ 1.35
ARHGEF9-206ENST00000466925 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
ARHGEF9-206ENST00000466925 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
ARHGEF9-206ENST00000466925 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
ARHGEF9-206ENST00000466925 BICRAQ9NZM4 1560 aa23.1■■□□□ 1.29
ARHGEF9-206ENST00000466925 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
ARHGEF9-206ENST00000466925 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
ARHGEF9-206ENST00000466925 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
ARHGEF9-206ENST00000466925 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
ARHGEF9-206ENST00000466925 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
ARHGEF9-206ENST00000466925 CECR2Q9BXF3 1484 aa22.56■■□□□ 1.2
ARHGEF9-206ENST00000466925 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
ARHGEF9-206ENST00000466925 NCAPD3P42695 1498 aa21.76■■□□□ 1.07
ARHGEF9-206ENST00000466925 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
ARHGEF9-206ENST00000466925 DNAJC5Q9H3Z4 198 aa21.69■■□□□ 1.06
ARHGEF9-206ENST00000466925 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
ARHGEF9-206ENST00000466925 ERCC6Q03468 1493 aa21.62■■□□□ 1.05
ARHGEF9-206ENST00000466925 SMARCA2P51531 1590 aa21.6■■□□□ 1.05
ARHGEF9-206ENST00000466925 HMGXB3Q12766 1538 aa21.58■■□□□ 1.04
ARHGEF9-206ENST00000466925 CUX2O14529 1486 aa21.57■■□□□ 1.04
ARHGEF9-206ENST00000466925 NESP48681 1621 aa21.52■■□□□ 1.04
ARHGEF9-206ENST00000466925 BAZ1AQ9NRL2 1556 aaPredicted RBP21.51■■□□□ 1.03
ARHGEF9-206ENST00000466925 BAZ1BQ9UIG0 1483 aaKnown RBP21.49■■□□□ 1.03
ARHGEF9-206ENST00000466925 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
ARHGEF9-206ENST00000466925 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
ARHGEF9-206ENST00000466925 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
ARHGEF9-206ENST00000466925 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
ARHGEF9-206ENST00000466925 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
ARHGEF9-206ENST00000466925 PDS5BQ9NTI5 1447 aa21.15■□□□□ 0.98
ARHGEF9-206ENST00000466925 WIZO95785 1651 aa21.12■□□□□ 0.97
ARHGEF9-206ENST00000466925 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
ARHGEF9-206ENST00000466925 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
ARHGEF9-206ENST00000466925 WDR62O43379 1518 aa20.95■□□□□ 0.94
ARHGEF9-206ENST00000466925 RSF1Q96T23 1441 aaPredicted RBP20.92■□□□□ 0.94
ARHGEF9-206ENST00000466925 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
ARHGEF9-206ENST00000466925 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
ARHGEF9-206ENST00000466925 CFTRP13569 1480 aa20.85■□□□□ 0.93
ARHGEF9-206ENST00000466925 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
ARHGEF9-206ENST00000466925 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
ARHGEF9-206ENST00000466925 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
ARHGEF9-206ENST00000466925 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
ARHGEF9-206ENST00000466925 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
ARHGEF9-206ENST00000466925 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
ARHGEF9-206ENST00000466925 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
ARHGEF9-206ENST00000466925 IFT140Q96RY7 1462 aa20.48■□□□□ 0.87
ARHGEF9-206ENST00000466925 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
ARHGEF9-206ENST00000466925 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
ARHGEF9-206ENST00000466925 EIF4G3O43432 1585 aaKnown RBP20.36■□□□□ 0.85
ARHGEF9-206ENST00000466925 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
ARHGEF9-206ENST00000466925 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
ARHGEF9-206ENST00000466925 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
ARHGEF9-206ENST00000466925 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
ARHGEF9-206ENST00000466925 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
ARHGEF9-206ENST00000466925 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
ARHGEF9-206ENST00000466925 ARHGEF11O15085 1522 aa20.28■□□□□ 0.84
ARHGEF9-206ENST00000466925 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF9-206ENST00000466925 RAD54L2Q9Y4B4 1467 aa20.23■□□□□ 0.83
ARHGEF9-206ENST00000466925 CHD1O14646 1710 aa20.2■□□□□ 0.82
ARHGEF9-206ENST00000466925 FBLN2P98095 1184 aa20.2■□□□□ 0.82
ARHGEF9-206ENST00000466925 TDRD9Q8NDG6 1382 aaKnown RBP20.18■□□□□ 0.82
ARHGEF9-206ENST00000466925 SOGA1O94964 1423 aa20.17■□□□□ 0.82
ARHGEF9-206ENST00000466925 CYB5RLQ6IPT4 315 aa20.16■□□□□ 0.82
ARHGEF9-206ENST00000466925 FGD5Q6ZNL6 1462 aa20.13■□□□□ 0.81
ARHGEF9-206ENST00000466925 CUX1P39880 1505 aa20.11■□□□□ 0.81
ARHGEF9-206ENST00000466925 SNAPC4Q5SXM2 1469 aa20.1■□□□□ 0.81
ARHGEF9-206ENST00000466925 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
ARHGEF9-206ENST00000466925 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
ARHGEF9-206ENST00000466925 WDR97A6NE52 1622 aa20■□□□□ 0.79
ARHGEF9-206ENST00000466925 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
ARHGEF9-206ENST00000466925 CLASP1Q7Z460 1538 aa19.98■□□□□ 0.79
ARHGEF9-206ENST00000466925 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF9-206ENST00000466925 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
ARHGEF9-206ENST00000466925 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
ARHGEF9-206ENST00000466925 SYNJ2O15056 1496 aa19.93■□□□□ 0.78
ARHGEF9-206ENST00000466925 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
ARHGEF9-206ENST00000466925 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
ARHGEF9-206ENST00000466925 PBRM1Q86U86 1689 aa19.89■□□□□ 0.77
ARHGEF9-206ENST00000466925 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
ARHGEF9-206ENST00000466925 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
ARHGEF9-206ENST00000466925 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
ARHGEF9-206ENST00000466925 GRIN2AQ12879 1464 aa19.74■□□□□ 0.75
ARHGEF9-206ENST00000466925 ADAMTS12P58397 1594 aa19.72■□□□□ 0.75
ARHGEF9-206ENST00000466925 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
ARHGEF9-206ENST00000466925 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
ARHGEF9-206ENST00000466925 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
ARHGEF9-206ENST00000466925 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
ARHGEF9-206ENST00000466925 NUP160Q12769 1436 aa19.68■□□□□ 0.74
ARHGEF9-206ENST00000466925 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
ARHGEF9-206ENST00000466925 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
ARHGEF9-206ENST00000466925 SHROOM2Q13796 1616 aa19.58■□□□□ 0.72
ARHGEF9-206ENST00000466925 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF9-206ENST00000466925 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
ARHGEF9-206ENST00000466925 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
ARHGEF9-206ENST00000466925 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms