RNA–Protein interactions for RNA: ENST00000466827.1

SAMD11-207, Transcript of sterile alpha motif domain containing 11, humanhuman

TSL 3

Gene SAMD11, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD11-207ENST00000466827 NISCHQ9Y2I1 1504 aa66.47■■■■■ 8.23
SAMD11-207ENST00000466827 ABCC9O60706 1549 aa59.51■■■■■ 7.12
SAMD11-207ENST00000466827 CCDC180Q9P1Z9 1646 aa59.51■■■■■ 7.12
SAMD11-207ENST00000466827 RB1CC1Q8TDY2 1594 aa56.63■■■■■ 6.66
SAMD11-207ENST00000466827 NACADO15069 1562 aa56.29■■■■■ 6.6
SAMD11-207ENST00000466827 DCAF8L2P0C7V8 631 aa56.15■■■■■ 6.58
SAMD11-207ENST00000466827 DNAJC5BQ9UF47 199 aa55.8■■■■■ 6.52
SAMD11-207ENST00000466827 MYO15BQ96JP2 1530 aa55.55■■■■■ 6.48
SAMD11-207ENST00000466827 PABPN1Q86U42 306 aaKnown RBP eCLIP55.48■■■■■ 6.47
SAMD11-207ENST00000466827 UNC13AQ9UPW8 1703 aa55.3■■■■■ 6.44
SAMD11-207ENST00000466827 ZCCHC6Q5VYS8 1495 aaKnown RBP55.09■■■■■ 6.41
SAMD11-207ENST00000466827 BICRAQ9NZM4 1560 aa55.01■■■■■ 6.4
SAMD11-207ENST00000466827 DCAF1Q9Y4B6 1507 aa54.88■■■■■ 6.38
SAMD11-207ENST00000466827 SCRIBQ14160 1630 aa54.29■■■■■ 6.28
SAMD11-207ENST00000466827 SHROOM4Q9ULL8 1493 aa54.24■■■■■ 6.27
SAMD11-207ENST00000466827 CC2D2AQ9P2K1 1620 aa53.72■■■■■ 6.19
SAMD11-207ENST00000466827 EIF4G1Q04637 1599 aaKnown RBP53.64■■■■■ 6.18
SAMD11-207ENST00000466827 CECR2Q9BXF3 1484 aa53.59■■■■■ 6.17
SAMD11-207ENST00000466827 NCAPD3P42695 1498 aa52■■■■■ 5.92
SAMD11-207ENST00000466827 ATAD2BQ9ULI0 1458 aa51.86■■■■■ 5.89
SAMD11-207ENST00000466827 SMARCA4P51532 1647 aa51.79■■■■■ 5.88
SAMD11-207ENST00000466827 SMARCA2P51531 1590 aa51.68■■■■■ 5.86
SAMD11-207ENST00000466827 HMGXB3Q12766 1538 aa51.58■■■■■ 5.85
SAMD11-207ENST00000466827 BAZ1AQ9NRL2 1556 aaPredicted RBP51.56■■■■■ 5.84
SAMD11-207ENST00000466827 ERCC6Q03468 1493 aa51.35■■■■■ 5.81
SAMD11-207ENST00000466827 BAZ1BQ9UIG0 1483 aaKnown RBP51.35■■■■■ 5.81
SAMD11-207ENST00000466827 PEG3Q9GZU2 1588 aa51.28■■■■■ 5.8
SAMD11-207ENST00000466827 MROH2BQ7Z745 1585 aa51.23■■■■■ 5.79
SAMD11-207ENST00000466827 CUX2O14529 1486 aa51.21■■■■■ 5.79
SAMD11-207ENST00000466827 NESP48681 1621 aa51.16■■■■■ 5.78
SAMD11-207ENST00000466827 DNAJC5Q9H3Z4 198 aa51.13■■■■■ 5.78
SAMD11-207ENST00000466827 LAMC3Q9Y6N6 1575 aa50.77■■■■■ 5.72
SAMD11-207ENST00000466827 WIZO95785 1651 aa50.59■■■■■ 5.69
SAMD11-207ENST00000466827 THOC2Q8NI27 1593 aaKnown RBP50.55■■■■■ 5.68
SAMD11-207ENST00000466827 PDS5BQ9NTI5 1447 aa50.52■■■■■ 5.68
SAMD11-207ENST00000466827 CADPSQ9ULU8 1353 aa50.45■■■■■ 5.67
SAMD11-207ENST00000466827 KIF21AQ7Z4S6 1674 aa50.42■■■■■ 5.66
SAMD11-207ENST00000466827 RSF1Q96T23 1441 aaPredicted RBP50.23■■■■■ 5.63
SAMD11-207ENST00000466827 MRC2Q9UBG0 1479 aa50.06■■■■■ 5.6
SAMD11-207ENST00000466827 TOP2AP11388 1531 aaKnown RBP49.95■■■■■ 5.59
SAMD11-207ENST00000466827 WDR62O43379 1518 aa49.9■■■■■ 5.58
SAMD11-207ENST00000466827 CFTRP13569 1480 aa49.88■■■■■ 5.57
SAMD11-207ENST00000466827 CEP164Q9UPV0 1460 aa49.88■■■■■ 5.57
SAMD11-207ENST00000466827 FANCD2Q9BXW9 1451 aa49.85■■■■■ 5.57
SAMD11-207ENST00000466827 URB2Q14146 1524 aaKnown RBP49.44■■■■■ 5.5
SAMD11-207ENST00000466827 CCDC88BA6NC98 1476 aa49.44■■■■■ 5.5
SAMD11-207ENST00000466827 PRDM2Q13029 1718 aa49.26■■■■■ 5.48
SAMD11-207ENST00000466827 OSCARQ8IYS5 282 aa48.96■■■■■ 5.43
SAMD11-207ENST00000466827 TRIM41Q8WV44 630 aa48.95■■■■■ 5.43
SAMD11-207ENST00000466827 TOPBP1Q92547 1522 aa48.92■■■■■ 5.42
SAMD11-207ENST00000466827 IFT140Q96RY7 1462 aa48.89■■■■■ 5.42
SAMD11-207ENST00000466827 ZNF608Q9ULD9 1512 aaPredicted RBP48.82■■■■■ 5.41
SAMD11-207ENST00000466827 ABCC8Q09428 1581 aa48.81■■■■■ 5.4
SAMD11-207ENST00000466827 DNMBPQ6XZF7 1577 aa48.72■■■■■ 5.39
SAMD11-207ENST00000466827 EIF4G3O43432 1585 aaKnown RBP48.49■■■■■ 5.35
SAMD11-207ENST00000466827 TARBP1Q13395 1621 aaKnown RBP48.44■■■■■ 5.35
SAMD11-207ENST00000466827 POLA1P09884 1462 aaPredicted RBP48.42■■■■■ 5.34
SAMD11-207ENST00000466827 AQRO60306 1485 aaKnown RBP eCLIP48.42■■■■■ 5.34
SAMD11-207ENST00000466827 RAD54L2Q9Y4B4 1467 aa48.28■■■■■ 5.32
SAMD11-207ENST00000466827 SOGA1O94964 1423 aa48.24■■■■■ 5.31
SAMD11-207ENST00000466827 RIMBP3CA6NJZ7 1639 aa48.23■■■■■ 5.31
SAMD11-207ENST00000466827 RIMBP3BA6NNM3 1639 aa48.23■■■■■ 5.31
SAMD11-207ENST00000466827 RIMBP3Q9UFD9 1639 aa48.23■■■■■ 5.31
SAMD11-207ENST00000466827 TDRD9Q8NDG6 1382 aaKnown RBP48.15■■■■■ 5.3
SAMD11-207ENST00000466827 SUPT5HO00267 1087 aaKnown RBP48.15■■■■■ 5.3
SAMD11-207ENST00000466827 FGD5Q6ZNL6 1462 aa48.14■■■■■ 5.3
SAMD11-207ENST00000466827 CUX1P39880 1505 aa48.12■■■■■ 5.29
SAMD11-207ENST00000466827 ARHGEF11O15085 1522 aa48.11■■■■■ 5.29
SAMD11-207ENST00000466827 FBLN2P98095 1184 aa48.1■■■■■ 5.29
SAMD11-207ENST00000466827 CHD1O14646 1710 aa48.1■■■■■ 5.29
SAMD11-207ENST00000466827 WDR97A6NE52 1622 aa47.92■■■■■ 5.26
SAMD11-207ENST00000466827 SNAPC4Q5SXM2 1469 aa47.89■■■■■ 5.26
SAMD11-207ENST00000466827 CYB5RLQ6IPT4 315 aa47.83■■■■■ 5.25
SAMD11-207ENST00000466827 GRIN2BQ13224 1484 aa47.78■■■■■ 5.24
SAMD11-207ENST00000466827 CHMP7Q8WUX9 453 aaPredicted RBP47.76■■■■■ 5.24
SAMD11-207ENST00000466827 MAGI1Q96QZ7 1491 aaPredicted RBP47.75■■■■■ 5.23
SAMD11-207ENST00000466827 ARAP1Q96P48 1450 aa47.66■■■■■ 5.22
SAMD11-207ENST00000466827 GAPVD1Q14C86 1478 aa47.63■■■■■ 5.22
SAMD11-207ENST00000466827 SYNJ2O15056 1496 aa47.6■■■■■ 5.21
SAMD11-207ENST00000466827 ABCA10Q8WWZ4 1543 aa47.6■■■■■ 5.21
SAMD11-207ENST00000466827 CLASP1Q7Z460 1538 aa47.58■■■■■ 5.21
SAMD11-207ENST00000466827 SYNJ1O43426 1573 aa47.55■■■■■ 5.2
SAMD11-207ENST00000466827 PBRM1Q86U86 1689 aa47.52■■■■■ 5.2
SAMD11-207ENST00000466827 ABCA5Q8WWZ7 1642 aa47.47■■■■■ 5.19
SAMD11-207ENST00000466827 WRNQ14191 1432 aaPredicted RBP eCLIP47.45■■■■■ 5.19
SAMD11-207ENST00000466827 TOP2BQ02880 1626 aa47.34■■■■■ 5.17
SAMD11-207ENST00000466827 BIVM-ERCC5R4GMW8 1640 aa47.32■■■■■ 5.17
SAMD11-207ENST00000466827 TRHP20396 242 aaPredicted RBP47.25■■■■■ 5.15
SAMD11-207ENST00000466827 GRIN2AQ12879 1464 aa47.15■■■■■ 5.14
SAMD11-207ENST00000466827 ADAMTS12P58397 1594 aa47.11■■■■■ 5.13
SAMD11-207ENST00000466827 FHAD1B1AJZ9 1412 aa47.04■■■■■ 5.12
SAMD11-207ENST00000466827 NUP160Q12769 1436 aa47.01■■■■■ 5.12
SAMD11-207ENST00000466827 ERICH3Q5RHP9 1530 aa46.98■■■■■ 5.11
SAMD11-207ENST00000466827 CEP170Q5SW79 1584 aa46.97■■■■■ 5.11
SAMD11-207ENST00000466827 ERCC6L2Q5T890 1561 aa46.88■■■■■ 5.1
SAMD11-207ENST00000466827 SHROOM2Q13796 1616 aa46.74■■■■■ 5.07
SAMD11-207ENST00000466827 JPH4Q96JJ6 628 aa46.58■■■■■ 5.05
SAMD11-207ENST00000466827 PRG4Q92954 1404 aaPredicted RBP46.57■■■■■ 5.05
SAMD11-207ENST00000466827 IGF1RP08069 1367 aa46.48■■■■■ 5.03
SAMD11-207ENST00000466827 KIF27Q86VH2 1401 aa46.47■■■■■ 5.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms