RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 NISCHQ9Y2I1 1504 aa41.21■■■■■ 4.19
SDHB-203ENST00000466613 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.5
SDHB-203ENST00000466613 ABCC9O60706 1549 aa36.39■■■■□ 3.42
SDHB-203ENST00000466613 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
SDHB-203ENST00000466613 NACADO15069 1562 aa34.73■■■■□ 3.15
SDHB-203ENST00000466613 DCAF8L2P0C7V8 631 aa34.5■■■■□ 3.11
SDHB-203ENST00000466613 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
SDHB-203ENST00000466613 ZCCHC6Q5VYS8 1495 aaKnown RBP34.27■■■■□ 3.08
SDHB-203ENST00000466613 UNC13AQ9UPW8 1703 aa34.15■■■■□ 3.06
SDHB-203ENST00000466613 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
SDHB-203ENST00000466613 PABPN1Q86U42 306 aaKnown RBP eCLIP33.88■■■■□ 3.01
SDHB-203ENST00000466613 BICRAQ9NZM4 1560 aa33.83■■■■□ 3.01
SDHB-203ENST00000466613 DNAJC5BQ9UF47 199 aa33.7■■■□□ 2.99
SDHB-203ENST00000466613 SCRIBQ14160 1630 aa33.58■■■□□ 2.97
SDHB-203ENST00000466613 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
SDHB-203ENST00000466613 EIF4G1Q04637 1599 aaKnown RBP32.97■■■□□ 2.87
SDHB-203ENST00000466613 CC2D2AQ9P2K1 1620 aa32.94■■■□□ 2.86
SDHB-203ENST00000466613 CECR2Q9BXF3 1484 aa32.74■■■□□ 2.83
SDHB-203ENST00000466613 SMARCA4P51532 1647 aa32.09■■■□□ 2.73
SDHB-203ENST00000466613 NCAPD3P42695 1498 aa32.02■■■□□ 2.72
SDHB-203ENST00000466613 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
SDHB-203ENST00000466613 ATAD2BQ9ULI0 1458 aa31.98■■■□□ 2.71
SDHB-203ENST00000466613 SMARCA2P51531 1590 aa31.94■■■□□ 2.7
SDHB-203ENST00000466613 HMGXB3Q12766 1538 aa31.86■■■□□ 2.69
SDHB-203ENST00000466613 PEG3Q9GZU2 1588 aa31.79■■■□□ 2.68
SDHB-203ENST00000466613 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
SDHB-203ENST00000466613 BAZ1BQ9UIG0 1483 aaKnown RBP31.71■■■□□ 2.67
SDHB-203ENST00000466613 WIZO95785 1651 aa31.41■■■□□ 2.62
SDHB-203ENST00000466613 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
SDHB-203ENST00000466613 NESP48681 1621 aa31.37■■■□□ 2.61
SDHB-203ENST00000466613 LAMC3Q9Y6N6 1575 aa31.28■■■□□ 2.6
SDHB-203ENST00000466613 CUX2O14529 1486 aa31.22■■■□□ 2.59
SDHB-203ENST00000466613 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
SDHB-203ENST00000466613 KIF21AQ7Z4S6 1674 aa31.06■■■□□ 2.56
SDHB-203ENST00000466613 TOP2AP11388 1531 aaKnown RBP31.05■■■□□ 2.56
SDHB-203ENST00000466613 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
SDHB-203ENST00000466613 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
SDHB-203ENST00000466613 PDS5BQ9NTI5 1447 aa31.03■■■□□ 2.56
SDHB-203ENST00000466613 CFTRP13569 1480 aa30.8■■■□□ 2.52
SDHB-203ENST00000466613 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
SDHB-203ENST00000466613 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
SDHB-203ENST00000466613 FANCD2Q9BXW9 1451 aa30.71■■■□□ 2.51
SDHB-203ENST00000466613 WDR62O43379 1518 aa30.7■■■□□ 2.51
SDHB-203ENST00000466613 DNAJC5Q9H3Z4 198 aa30.67■■■□□ 2.5
SDHB-203ENST00000466613 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
SDHB-203ENST00000466613 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
SDHB-203ENST00000466613 URB2Q14146 1524 aaKnown RBP30.43■■■□□ 2.46
SDHB-203ENST00000466613 TOPBP1Q92547 1522 aa30.19■■■□□ 2.42
SDHB-203ENST00000466613 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
SDHB-203ENST00000466613 DNMBPQ6XZF7 1577 aa30.14■■■□□ 2.42
SDHB-203ENST00000466613 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
SDHB-203ENST00000466613 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
SDHB-203ENST00000466613 ZNF608Q9ULD9 1512 aaPredicted RBP29.98■■■□□ 2.39
SDHB-203ENST00000466613 TARBP1Q13395 1621 aaKnown RBP29.92■■■□□ 2.38
SDHB-203ENST00000466613 POLA1P09884 1462 aaPredicted RBP29.9■■■□□ 2.38
SDHB-203ENST00000466613 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
SDHB-203ENST00000466613 CUX1P39880 1505 aa29.81■■■□□ 2.36
SDHB-203ENST00000466613 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
SDHB-203ENST00000466613 FGD5Q6ZNL6 1462 aa29.78■■■□□ 2.36
SDHB-203ENST00000466613 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
SDHB-203ENST00000466613 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.35
SDHB-203ENST00000466613 SOGA1O94964 1423 aa29.74■■■□□ 2.35
SDHB-203ENST00000466613 WDR97A6NE52 1622 aa29.67■■■□□ 2.34
SDHB-203ENST00000466613 CHD1O14646 1710 aa29.62■■■□□ 2.33
SDHB-203ENST00000466613 TDRD9Q8NDG6 1382 aaKnown RBP29.61■■■□□ 2.33
SDHB-203ENST00000466613 BIVM-ERCC5R4GMW8 1640 aa29.5■■■□□ 2.31
SDHB-203ENST00000466613 SNAPC4Q5SXM2 1469 aa29.48■■■□□ 2.31
SDHB-203ENST00000466613 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
SDHB-203ENST00000466613 ABCA10Q8WWZ4 1543 aa29.47■■■□□ 2.31
SDHB-203ENST00000466613 TOP2BQ02880 1626 aa29.47■■■□□ 2.31
SDHB-203ENST00000466613 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
SDHB-203ENST00000466613 PBRM1Q86U86 1689 aa29.46■■■□□ 2.31
SDHB-203ENST00000466613 WRNQ14191 1432 aaPredicted RBP eCLIP29.45■■■□□ 2.31
SDHB-203ENST00000466613 RIMBP3CA6NJZ7 1639 aa29.45■■■□□ 2.3
SDHB-203ENST00000466613 RIMBP3BA6NNM3 1639 aa29.45■■■□□ 2.3
SDHB-203ENST00000466613 RIMBP3Q9UFD9 1639 aa29.45■■■□□ 2.3
SDHB-203ENST00000466613 SYNJ1O43426 1573 aa29.44■■■□□ 2.3
SDHB-203ENST00000466613 MAGI1Q96QZ7 1491 aaPredicted RBP29.44■■■□□ 2.3
SDHB-203ENST00000466613 FBLN2P98095 1184 aa29.43■■■□□ 2.3
SDHB-203ENST00000466613 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
SDHB-203ENST00000466613 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
SDHB-203ENST00000466613 ARHGEF11O15085 1522 aa29.38■■■□□ 2.29
SDHB-203ENST00000466613 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
SDHB-203ENST00000466613 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
SDHB-203ENST00000466613 CLASP1Q7Z460 1538 aa29.25■■■□□ 2.27
SDHB-203ENST00000466613 ADAMTS12P58397 1594 aa29.17■■■□□ 2.26
SDHB-203ENST00000466613 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
SDHB-203ENST00000466613 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
SDHB-203ENST00000466613 GRIN2AQ12879 1464 aa29.1■■■□□ 2.25
SDHB-203ENST00000466613 CYB5RLQ6IPT4 315 aa29.06■■■□□ 2.24
SDHB-203ENST00000466613 FHAD1B1AJZ9 1412 aa29.05■■■□□ 2.24
SDHB-203ENST00000466613 CEP170Q5SW79 1584 aa28.98■■■□□ 2.23
SDHB-203ENST00000466613 NUP160Q12769 1436 aa28.98■■■□□ 2.23
SDHB-203ENST00000466613 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
SDHB-203ENST00000466613 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
SDHB-203ENST00000466613 CUL7Q14999 1698 aa28.81■■■□□ 2.2
SDHB-203ENST00000466613 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
SDHB-203ENST00000466613 IGF1RP08069 1367 aa28.77■■■□□ 2.2
SDHB-203ENST00000466613 RUSC2Q8N2Y8 1516 aa28.75■■■□□ 2.19
SDHB-203ENST00000466613 PRG4Q92954 1404 aaPredicted RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms