RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 NISCHQ9Y2I1 1504 aa39.13■■■■□ 3.85
CRAMP1-204ENST00000466562 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
CRAMP1-204ENST00000466562 ABCC9O60706 1549 aa34.5■■■■□ 3.11
CRAMP1-204ENST00000466562 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
CRAMP1-204ENST00000466562 NACADO15069 1562 aa32.89■■■□□ 2.86
CRAMP1-204ENST00000466562 DCAF8L2P0C7V8 631 aa32.89■■■□□ 2.86
CRAMP1-204ENST00000466562 MYO15BQ96JP2 1530 aa32.6■■■□□ 2.81
CRAMP1-204ENST00000466562 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
CRAMP1-204ENST00000466562 DCAF1Q9Y4B6 1507 aa32.34■■■□□ 2.77
CRAMP1-204ENST00000466562 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.75
CRAMP1-204ENST00000466562 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
CRAMP1-204ENST00000466562 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
CRAMP1-204ENST00000466562 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
CRAMP1-204ENST00000466562 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
CRAMP1-204ENST00000466562 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
CRAMP1-204ENST00000466562 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
CRAMP1-204ENST00000466562 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
CRAMP1-204ENST00000466562 CECR2Q9BXF3 1484 aa31.03■■■□□ 2.56
CRAMP1-204ENST00000466562 NCAPD3P42695 1498 aa30.4■■■□□ 2.46
CRAMP1-204ENST00000466562 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
CRAMP1-204ENST00000466562 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
CRAMP1-204ENST00000466562 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.45
CRAMP1-204ENST00000466562 SMARCA2P51531 1590 aa30.27■■■□□ 2.44
CRAMP1-204ENST00000466562 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
CRAMP1-204ENST00000466562 MROH2BQ7Z745 1585 aa30.15■■■□□ 2.42
CRAMP1-204ENST00000466562 PEG3Q9GZU2 1588 aa30.11■■■□□ 2.41
CRAMP1-204ENST00000466562 BAZ1BQ9UIG0 1483 aaKnown RBP30.07■■■□□ 2.4
CRAMP1-204ENST00000466562 WIZO95785 1651 aa29.79■■■□□ 2.36
CRAMP1-204ENST00000466562 NESP48681 1621 aa29.77■■■□□ 2.36
CRAMP1-204ENST00000466562 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
CRAMP1-204ENST00000466562 RSF1Q96T23 1441 aaPredicted RBP29.71■■■□□ 2.35
CRAMP1-204ENST00000466562 LAMC3Q9Y6N6 1575 aa29.6■■■□□ 2.33
CRAMP1-204ENST00000466562 CUX2O14529 1486 aa29.55■■■□□ 2.32
CRAMP1-204ENST00000466562 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
CRAMP1-204ENST00000466562 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.31
CRAMP1-204ENST00000466562 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.3
CRAMP1-204ENST00000466562 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
CRAMP1-204ENST00000466562 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
CRAMP1-204ENST00000466562 CFTRP13569 1480 aa29.25■■■□□ 2.27
CRAMP1-204ENST00000466562 CCDC88BA6NC98 1476 aa29.15■■■□□ 2.26
CRAMP1-204ENST00000466562 MRC2Q9UBG0 1479 aa29.15■■■□□ 2.26
CRAMP1-204ENST00000466562 FANCD2Q9BXW9 1451 aa29.14■■■□□ 2.26
CRAMP1-204ENST00000466562 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
CRAMP1-204ENST00000466562 DNAJC5Q9H3Z4 198 aa29.09■■■□□ 2.25
CRAMP1-204ENST00000466562 WDR62O43379 1518 aa29.06■■■□□ 2.24
CRAMP1-204ENST00000466562 URB2Q14146 1524 aaKnown RBP28.88■■■□□ 2.21
CRAMP1-204ENST00000466562 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
CRAMP1-204ENST00000466562 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
CRAMP1-204ENST00000466562 TOPBP1Q92547 1522 aa28.64■■■□□ 2.17
CRAMP1-204ENST00000466562 ABCC8Q09428 1581 aa28.6■■■□□ 2.17
CRAMP1-204ENST00000466562 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
CRAMP1-204ENST00000466562 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
CRAMP1-204ENST00000466562 ZNF608Q9ULD9 1512 aaPredicted RBP28.46■■■□□ 2.15
CRAMP1-204ENST00000466562 POLA1P09884 1462 aaPredicted RBP28.38■■■□□ 2.13
CRAMP1-204ENST00000466562 TARBP1Q13395 1621 aaKnown RBP28.32■■■□□ 2.12
CRAMP1-204ENST00000466562 OSCARQ8IYS5 282 aa28.32■■■□□ 2.12
CRAMP1-204ENST00000466562 CUX1P39880 1505 aa28.29■■■□□ 2.12
CRAMP1-204ENST00000466562 RAD54L2Q9Y4B4 1467 aa28.28■■■□□ 2.12
CRAMP1-204ENST00000466562 EIF4G3O43432 1585 aaKnown RBP28.28■■■□□ 2.12
CRAMP1-204ENST00000466562 SOGA1O94964 1423 aa28.27■■■□□ 2.12
CRAMP1-204ENST00000466562 AQRO60306 1485 aaKnown RBP eCLIP28.27■■■□□ 2.12
CRAMP1-204ENST00000466562 FGD5Q6ZNL6 1462 aa28.26■■■□□ 2.11
CRAMP1-204ENST00000466562 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
CRAMP1-204ENST00000466562 WDR97A6NE52 1622 aa28.06■■■□□ 2.08
CRAMP1-204ENST00000466562 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.08
CRAMP1-204ENST00000466562 FBLN2P98095 1184 aa28■■■□□ 2.07
CRAMP1-204ENST00000466562 SNAPC4Q5SXM2 1469 aa27.97■■■□□ 2.07
CRAMP1-204ENST00000466562 TRIM41Q8WV44 630 aa27.97■■■□□ 2.07
CRAMP1-204ENST00000466562 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
CRAMP1-204ENST00000466562 GRIN2BQ13224 1484 aa27.96■■■□□ 2.07
CRAMP1-204ENST00000466562 TOP2BQ02880 1626 aa27.95■■■□□ 2.06
CRAMP1-204ENST00000466562 CHD1O14646 1710 aa27.95■■■□□ 2.06
CRAMP1-204ENST00000466562 SYNJ1O43426 1573 aa27.93■■■□□ 2.06
CRAMP1-204ENST00000466562 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
CRAMP1-204ENST00000466562 GAPVD1Q14C86 1478 aa27.92■■■□□ 2.06
CRAMP1-204ENST00000466562 MAGI1Q96QZ7 1491 aaPredicted RBP27.91■■■□□ 2.06
CRAMP1-204ENST00000466562 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
CRAMP1-204ENST00000466562 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
CRAMP1-204ENST00000466562 RIMBP3CA6NJZ7 1639 aa27.83■■■□□ 2.05
CRAMP1-204ENST00000466562 RIMBP3BA6NNM3 1639 aa27.83■■■□□ 2.05
CRAMP1-204ENST00000466562 RIMBP3Q9UFD9 1639 aa27.83■■■□□ 2.05
CRAMP1-204ENST00000466562 SYNJ2O15056 1496 aa27.82■■■□□ 2.04
CRAMP1-204ENST00000466562 ARHGEF11O15085 1522 aa27.82■■■□□ 2.04
CRAMP1-204ENST00000466562 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
CRAMP1-204ENST00000466562 CLASP1Q7Z460 1538 aa27.69■■■□□ 2.02
CRAMP1-204ENST00000466562 CYB5RLQ6IPT4 315 aa27.63■■■□□ 2.01
CRAMP1-204ENST00000466562 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
CRAMP1-204ENST00000466562 ADAMTS12P58397 1594 aa27.6■■■□□ 2.01
CRAMP1-204ENST00000466562 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
CRAMP1-204ENST00000466562 FHAD1B1AJZ9 1412 aa27.59■■■□□ 2.01
CRAMP1-204ENST00000466562 ARAP1Q96P48 1450 aa27.57■■■□□ 2
CRAMP1-204ENST00000466562 NUP160Q12769 1436 aa27.5■■□□□ 1.99
CRAMP1-204ENST00000466562 CEP170Q5SW79 1584 aa27.47■■□□□ 1.99
CRAMP1-204ENST00000466562 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
CRAMP1-204ENST00000466562 IGF1RP08069 1367 aa27.42■■□□□ 1.98
CRAMP1-204ENST00000466562 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
CRAMP1-204ENST00000466562 SHROOM2Q13796 1616 aa27.29■■□□□ 1.96
CRAMP1-204ENST00000466562 JPH4Q96JJ6 628 aa27.26■■□□□ 1.95
CRAMP1-204ENST00000466562 CUL7Q14999 1698 aa27.26■■□□□ 1.95
CRAMP1-204ENST00000466562 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 267 ms