RNA–Protein interactions for RNA: ENST00000466550.1

RPL21-206, Transcript of ribosomal protein L21, humanhuman

TSL 2

Gene RPL21, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL21-206ENST00000466550 NISCHQ9Y2I1 1504 aa28.51■■■□□ 2.15
RPL21-206ENST00000466550 ABCC9O60706 1549 aa25.85■■□□□ 1.73
RPL21-206ENST00000466550 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
RPL21-206ENST00000466550 RB1CC1Q8TDY2 1594 aa24.48■■□□□ 1.51
RPL21-206ENST00000466550 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
RPL21-206ENST00000466550 NACADO15069 1562 aa24.26■■□□□ 1.47
RPL21-206ENST00000466550 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
RPL21-206ENST00000466550 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
RPL21-206ENST00000466550 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
RPL21-206ENST00000466550 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
RPL21-206ENST00000466550 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
RPL21-206ENST00000466550 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
RPL21-206ENST00000466550 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
RPL21-206ENST00000466550 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
RPL21-206ENST00000466550 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
RPL21-206ENST00000466550 CC2D2AQ9P2K1 1620 aa23.32■■□□□ 1.32
RPL21-206ENST00000466550 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
RPL21-206ENST00000466550 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
RPL21-206ENST00000466550 DNAJC5Q9H3Z4 198 aa22.49■■□□□ 1.19
RPL21-206ENST00000466550 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
RPL21-206ENST00000466550 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
RPL21-206ENST00000466550 CUX2O14529 1486 aa22.29■■□□□ 1.16
RPL21-206ENST00000466550 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
RPL21-206ENST00000466550 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
RPL21-206ENST00000466550 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
RPL21-206ENST00000466550 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
RPL21-206ENST00000466550 NESP48681 1621 aa22.18■■□□□ 1.14
RPL21-206ENST00000466550 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
RPL21-206ENST00000466550 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
RPL21-206ENST00000466550 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
RPL21-206ENST00000466550 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
RPL21-206ENST00000466550 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
RPL21-206ENST00000466550 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
RPL21-206ENST00000466550 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
RPL21-206ENST00000466550 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
RPL21-206ENST00000466550 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
RPL21-206ENST00000466550 WIZO95785 1651 aa21.72■■□□□ 1.07
RPL21-206ENST00000466550 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
RPL21-206ENST00000466550 WDR62O43379 1518 aa21.61■■□□□ 1.05
RPL21-206ENST00000466550 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.04
RPL21-206ENST00000466550 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
RPL21-206ENST00000466550 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
RPL21-206ENST00000466550 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
RPL21-206ENST00000466550 CFTRP13569 1480 aa21.45■■□□□ 1.03
RPL21-206ENST00000466550 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
RPL21-206ENST00000466550 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
RPL21-206ENST00000466550 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
RPL21-206ENST00000466550 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
RPL21-206ENST00000466550 CCDC88BA6NC98 1476 aa21.19■□□□□ 0.98
RPL21-206ENST00000466550 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.97
RPL21-206ENST00000466550 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
RPL21-206ENST00000466550 TOPBP1Q92547 1522 aa21.08■□□□□ 0.96
RPL21-206ENST00000466550 RIMBP3CA6NJZ7 1639 aa21.03■□□□□ 0.96
RPL21-206ENST00000466550 RIMBP3BA6NNM3 1639 aa21.03■□□□□ 0.96
RPL21-206ENST00000466550 RIMBP3Q9UFD9 1639 aa21.03■□□□□ 0.96
RPL21-206ENST00000466550 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
RPL21-206ENST00000466550 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
RPL21-206ENST00000466550 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
RPL21-206ENST00000466550 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
RPL21-206ENST00000466550 AQRO60306 1485 aaKnown RBP eCLIP20.91■□□□□ 0.945e-9■□□□□ 11.2
RPL21-206ENST00000466550 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
RPL21-206ENST00000466550 CHD1O14646 1710 aa20.86■□□□□ 0.93
RPL21-206ENST00000466550 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
RPL21-206ENST00000466550 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
RPL21-206ENST00000466550 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
RPL21-206ENST00000466550 FBLN2P98095 1184 aa20.78■□□□□ 0.92
RPL21-206ENST00000466550 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
RPL21-206ENST00000466550 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
RPL21-206ENST00000466550 SOGA1O94964 1423 aa20.74■□□□□ 0.91
RPL21-206ENST00000466550 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
RPL21-206ENST00000466550 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
RPL21-206ENST00000466550 CUX1P39880 1505 aa20.68■□□□□ 0.9
RPL21-206ENST00000466550 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
RPL21-206ENST00000466550 CLASP1Q7Z460 1538 aa20.62■□□□□ 0.89
RPL21-206ENST00000466550 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
RPL21-206ENST00000466550 MAGI1Q96QZ7 1491 aaPredicted RBP20.58■□□□□ 0.89
RPL21-206ENST00000466550 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.89
RPL21-206ENST00000466550 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
RPL21-206ENST00000466550 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
RPL21-206ENST00000466550 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
RPL21-206ENST00000466550 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
RPL21-206ENST00000466550 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
RPL21-206ENST00000466550 ABCA10Q8WWZ4 1543 aa20.44■□□□□ 0.86
RPL21-206ENST00000466550 ABCA5Q8WWZ7 1642 aa20.44■□□□□ 0.86
RPL21-206ENST00000466550 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
RPL21-206ENST00000466550 GRIN2AQ12879 1464 aa20.33■□□□□ 0.85
RPL21-206ENST00000466550 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
RPL21-206ENST00000466550 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
RPL21-206ENST00000466550 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
RPL21-206ENST00000466550 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
RPL21-206ENST00000466550 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.84
RPL21-206ENST00000466550 TOP2BQ02880 1626 aa20.27■□□□□ 0.83
RPL21-206ENST00000466550 NUP160Q12769 1436 aa20.27■□□□□ 0.83
RPL21-206ENST00000466550 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
RPL21-206ENST00000466550 SHROOM2Q13796 1616 aa20.19■□□□□ 0.82
RPL21-206ENST00000466550 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
RPL21-206ENST00000466550 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
RPL21-206ENST00000466550 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
RPL21-206ENST00000466550 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
RPL21-206ENST00000466550 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms