RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
CYTH3-205ENST00000466543 ABCC9O60706 1549 aa39.05■■■■□ 3.84
CYTH3-205ENST00000466543 CCDC180Q9P1Z9 1646 aa39■■■■□ 3.83
CYTH3-205ENST00000466543 RB1CC1Q8TDY2 1594 aa37.09■■■■□ 3.53
CYTH3-205ENST00000466543 NACADO15069 1562 aa36.84■■■■□ 3.49
CYTH3-205ENST00000466543 DNAJC5BQ9UF47 199 aa36.72■■■■□ 3.47
CYTH3-205ENST00000466543 DCAF8L2P0C7V8 631 aa36.64■■■■□ 3.46
CYTH3-205ENST00000466543 UNC13AQ9UPW8 1703 aa36.39■■■■□ 3.42
CYTH3-205ENST00000466543 PABPN1Q86U42 306 aaKnown RBP eCLIP36.36■■■■□ 3.41
CYTH3-205ENST00000466543 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
CYTH3-205ENST00000466543 BICRAQ9NZM4 1560 aa36.14■■■■□ 3.38
CYTH3-205ENST00000466543 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
CYTH3-205ENST00000466543 DCAF1Q9Y4B6 1507 aa35.87■■■■□ 3.33
CYTH3-205ENST00000466543 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
CYTH3-205ENST00000466543 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
CYTH3-205ENST00000466543 CC2D2AQ9P2K1 1620 aa35.28■■■■□ 3.24
CYTH3-205ENST00000466543 EIF4G1Q04637 1599 aaKnown RBP35.19■■■■□ 3.22
CYTH3-205ENST00000466543 CECR2Q9BXF3 1484 aa35.14■■■■□ 3.22
CYTH3-205ENST00000466543 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
CYTH3-205ENST00000466543 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.03
CYTH3-205ENST00000466543 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
CYTH3-205ENST00000466543 SMARCA2P51531 1590 aa33.81■■■■□ 3
CYTH3-205ENST00000466543 HMGXB3Q12766 1538 aa33.78■■■■□ 3
CYTH3-205ENST00000466543 BAZ1AQ9NRL2 1556 aaPredicted RBP33.7■■■□□ 2.99
CYTH3-205ENST00000466543 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
CYTH3-205ENST00000466543 DNAJC5Q9H3Z4 198 aa33.6■■■□□ 2.97
CYTH3-205ENST00000466543 NESP48681 1621 aa33.59■■■□□ 2.97
CYTH3-205ENST00000466543 PEG3Q9GZU2 1588 aa33.59■■■□□ 2.97
CYTH3-205ENST00000466543 CUX2O14529 1486 aa33.58■■■□□ 2.97
CYTH3-205ENST00000466543 BAZ1BQ9UIG0 1483 aaKnown RBP33.58■■■□□ 2.97
CYTH3-205ENST00000466543 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
CYTH3-205ENST00000466543 LAMC3Q9Y6N6 1575 aa33.25■■■□□ 2.91
CYTH3-205ENST00000466543 THOC2Q8NI27 1593 aaKnown RBP33.23■■■□□ 2.91
CYTH3-205ENST00000466543 WIZO95785 1651 aa33.16■■■□□ 2.9
CYTH3-205ENST00000466543 KIF21AQ7Z4S6 1674 aa33.14■■■□□ 2.9
CYTH3-205ENST00000466543 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
CYTH3-205ENST00000466543 CADPSQ9ULU8 1353 aa32.98■■■□□ 2.87
CYTH3-205ENST00000466543 RSF1Q96T23 1441 aaPredicted RBP32.82■■■□□ 2.84
CYTH3-205ENST00000466543 MRC2Q9UBG0 1479 aa32.79■■■□□ 2.84
CYTH3-205ENST00000466543 WDR62O43379 1518 aa32.73■■■□□ 2.83
CYTH3-205ENST00000466543 TOP2AP11388 1531 aaKnown RBP32.67■■■□□ 2.82
CYTH3-205ENST00000466543 CEP164Q9UPV0 1460 aa32.65■■■□□ 2.82
CYTH3-205ENST00000466543 CFTRP13569 1480 aa32.63■■■□□ 2.81
CYTH3-205ENST00000466543 FANCD2Q9BXW9 1451 aa32.63■■■□□ 2.81
CYTH3-205ENST00000466543 URB2Q14146 1524 aaKnown RBP32.41■■■□□ 2.78
CYTH3-205ENST00000466543 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
CYTH3-205ENST00000466543 PRDM2Q13029 1718 aa32.32■■■□□ 2.76
CYTH3-205ENST00000466543 TRIM41Q8WV44 630 aa32.12■■■□□ 2.73
CYTH3-205ENST00000466543 TOPBP1Q92547 1522 aa32.03■■■□□ 2.72
CYTH3-205ENST00000466543 ZNF608Q9ULD9 1512 aaPredicted RBP32.03■■■□□ 2.72
CYTH3-205ENST00000466543 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
CYTH3-205ENST00000466543 IFT140Q96RY7 1462 aa31.98■■■□□ 2.71
CYTH3-205ENST00000466543 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
CYTH3-205ENST00000466543 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
CYTH3-205ENST00000466543 EIF4G3O43432 1585 aaKnown RBP31.82■■■□□ 2.68
CYTH3-205ENST00000466543 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
CYTH3-205ENST00000466543 POLA1P09884 1462 aaPredicted RBP31.72■■■□□ 2.67
CYTH3-205ENST00000466543 RIMBP3CA6NJZ7 1639 aa31.71■■■□□ 2.67
CYTH3-205ENST00000466543 RIMBP3BA6NNM3 1639 aa31.71■■■□□ 2.67
CYTH3-205ENST00000466543 RIMBP3Q9UFD9 1639 aa31.71■■■□□ 2.67
CYTH3-205ENST00000466543 AQRO60306 1485 aaKnown RBP eCLIP31.71■■■□□ 2.67
CYTH3-205ENST00000466543 RAD54L2Q9Y4B4 1467 aa31.62■■■□□ 2.65
CYTH3-205ENST00000466543 CHD1O14646 1710 aa31.61■■■□□ 2.65
CYTH3-205ENST00000466543 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
CYTH3-205ENST00000466543 SOGA1O94964 1423 aa31.52■■■□□ 2.64
CYTH3-205ENST00000466543 CUX1P39880 1505 aa31.52■■■□□ 2.64
CYTH3-205ENST00000466543 FGD5Q6ZNL6 1462 aa31.51■■■□□ 2.63
CYTH3-205ENST00000466543 TDRD9Q8NDG6 1382 aaKnown RBP31.5■■■□□ 2.63
CYTH3-205ENST00000466543 FBLN2P98095 1184 aa31.42■■■□□ 2.62
CYTH3-205ENST00000466543 SNAPC4Q5SXM2 1469 aa31.37■■■□□ 2.61
CYTH3-205ENST00000466543 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
CYTH3-205ENST00000466543 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
CYTH3-205ENST00000466543 CYB5RLQ6IPT4 315 aa31.32■■■□□ 2.6
CYTH3-205ENST00000466543 ARAP1Q96P48 1450 aa31.31■■■□□ 2.6
CYTH3-205ENST00000466543 GRIN2BQ13224 1484 aa31.24■■■□□ 2.59
CYTH3-205ENST00000466543 MAGI1Q96QZ7 1491 aaPredicted RBP31.24■■■□□ 2.59
CYTH3-205ENST00000466543 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
CYTH3-205ENST00000466543 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
CYTH3-205ENST00000466543 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
CYTH3-205ENST00000466543 SYNJ2O15056 1496 aa31.14■■■□□ 2.58
CYTH3-205ENST00000466543 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.58
CYTH3-205ENST00000466543 SYNJ1O43426 1573 aa31.13■■■□□ 2.57
CYTH3-205ENST00000466543 ABCA10Q8WWZ4 1543 aa31.13■■■□□ 2.57
CYTH3-205ENST00000466543 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
CYTH3-205ENST00000466543 BIVM-ERCC5R4GMW8 1640 aa30.98■■■□□ 2.55
CYTH3-205ENST00000466543 TOP2BQ02880 1626 aa30.97■■■□□ 2.55
CYTH3-205ENST00000466543 WRNQ14191 1432 aaPredicted RBP eCLIP30.96■■■□□ 2.55
CYTH3-205ENST00000466543 TRHP20396 242 aaPredicted RBP30.92■■■□□ 2.54
CYTH3-205ENST00000466543 ADAMTS12P58397 1594 aa30.88■■■□□ 2.53
CYTH3-205ENST00000466543 GRIN2AQ12879 1464 aa30.87■■■□□ 2.53
CYTH3-205ENST00000466543 ERCC6L2Q5T890 1561 aa30.82■■■□□ 2.52
CYTH3-205ENST00000466543 CEP170Q5SW79 1584 aa30.81■■■□□ 2.52
CYTH3-205ENST00000466543 NUP160Q12769 1436 aa30.78■■■□□ 2.52
CYTH3-205ENST00000466543 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
CYTH3-205ENST00000466543 ERICH3Q5RHP9 1530 aa30.72■■■□□ 2.51
CYTH3-205ENST00000466543 SHROOM2Q13796 1616 aa30.66■■■□□ 2.5
CYTH3-205ENST00000466543 PRG4Q92954 1404 aaPredicted RBP30.46■■■□□ 2.47
CYTH3-205ENST00000466543 RUSC2Q8N2Y8 1516 aa30.45■■■□□ 2.47
CYTH3-205ENST00000466543 JPH4Q96JJ6 628 aa30.42■■■□□ 2.46
CYTH3-205ENST00000466543 IGF1RP08069 1367 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms