RNA–Protein interactions for RNA: ENST00000466509.1

RPSAP48-201, Transcript of ribosomal protein SA pseudogene 48, humanhuman

BASIC

Gene RPSAP48, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP48-201ENST00000466509 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
RPSAP48-201ENST00000466509 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
RPSAP48-201ENST00000466509 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
RPSAP48-201ENST00000466509 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
RPSAP48-201ENST00000466509 SENP3Q9H4L4 574 aaPredicted RBP16.02■□□□□ 0.16
RPSAP48-201ENST00000466509 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
RPSAP48-201ENST00000466509 ABCC9O60706 1549 aa15.22■□□□□ 0.03
RPSAP48-201ENST00000466509 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
RPSAP48-201ENST00000466509 FOXD1Q16676 465 aa14.77□□□□□ -0.05
RPSAP48-201ENST00000466509 RB1CC1Q8TDY2 1594 aa14.65□□□□□ -0.06
RPSAP48-201ENST00000466509 NACADO15069 1562 aa14.61□□□□□ -0.07
RPSAP48-201ENST00000466509 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
RPSAP48-201ENST00000466509 DCAF8L2P0C7V8 631 aa14.51□□□□□ -0.09
RPSAP48-201ENST00000466509 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
RPSAP48-201ENST00000466509 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
RPSAP48-201ENST00000466509 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
RPSAP48-201ENST00000466509 ADRA2BP18089 450 aa14.3□□□□□ -0.12
RPSAP48-201ENST00000466509 PPP6R1Q9UPN7 881 aa14.29□□□□□ -0.12
RPSAP48-201ENST00000466509 BICRAQ9NZM4 1560 aa14.17□□□□□ -0.14
RPSAP48-201ENST00000466509 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
RPSAP48-201ENST00000466509 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
RPSAP48-201ENST00000466509 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
RPSAP48-201ENST00000466509 PIAS4Q8N2W9 510 aaPredicted RBP13.98□□□□□ -0.17
RPSAP48-201ENST00000466509 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
RPSAP48-201ENST00000466509 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
RPSAP48-201ENST00000466509 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
RPSAP48-201ENST00000466509 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
RPSAP48-201ENST00000466509 MSH5O43196 834 aa13.66□□□□□ -0.22
RPSAP48-201ENST00000466509 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
RPSAP48-201ENST00000466509 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
RPSAP48-201ENST00000466509 SMARCA2P51531 1590 aa13.47□□□□□ -0.25
RPSAP48-201ENST00000466509 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
RPSAP48-201ENST00000466509 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
RPSAP48-201ENST00000466509 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
RPSAP48-201ENST00000466509 PEG3Q9GZU2 1588 aa13.41□□□□□ -0.26
RPSAP48-201ENST00000466509 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
RPSAP48-201ENST00000466509 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
RPSAP48-201ENST00000466509 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
RPSAP48-201ENST00000466509 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
RPSAP48-201ENST00000466509 WIZO95785 1651 aa13.25□□□□□ -0.29
RPSAP48-201ENST00000466509 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
RPSAP48-201ENST00000466509 ERCC6Q03468 1493 aa13.15□□□□□ -0.3
RPSAP48-201ENST00000466509 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
RPSAP48-201ENST00000466509 NESP48681 1621 aa13.14□□□□□ -0.31
RPSAP48-201ENST00000466509 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
RPSAP48-201ENST00000466509 KCNA4P22459 653 aa13.13□□□□□ -0.31
RPSAP48-201ENST00000466509 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
RPSAP48-201ENST00000466509 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
RPSAP48-201ENST00000466509 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
RPSAP48-201ENST00000466509 CUX2O14529 1486 aa13.05□□□□□ -0.32
RPSAP48-201ENST00000466509 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.33
RPSAP48-201ENST00000466509 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
RPSAP48-201ENST00000466509 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
RPSAP48-201ENST00000466509 CFTRP13569 1480 aa12.97□□□□□ -0.33
RPSAP48-201ENST00000466509 CCDC88BA6NC98 1476 aa12.95□□□□□ -0.34
RPSAP48-201ENST00000466509 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
RPSAP48-201ENST00000466509 FANCD2Q9BXW9 1451 aa12.92□□□□□ -0.34
RPSAP48-201ENST00000466509 MRC2Q9UBG0 1479 aa12.92□□□□□ -0.34
RPSAP48-201ENST00000466509 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
RPSAP48-201ENST00000466509 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
RPSAP48-201ENST00000466509 WDR62O43379 1518 aa12.88□□□□□ -0.35
RPSAP48-201ENST00000466509 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
RPSAP48-201ENST00000466509 SUPT5HO00267 1087 aaKnown RBP12.8□□□□□ -0.36
RPSAP48-201ENST00000466509 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
RPSAP48-201ENST00000466509 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
RPSAP48-201ENST00000466509 ABCC8Q09428 1581 aa12.73□□□□□ -0.37
RPSAP48-201ENST00000466509 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
RPSAP48-201ENST00000466509 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
RPSAP48-201ENST00000466509 RNF216Q9NWF9 866 aaPredicted RBP12.68□□□□□ -0.38
RPSAP48-201ENST00000466509 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
RPSAP48-201ENST00000466509 IFT140Q96RY7 1462 aa12.65□□□□□ -0.38
RPSAP48-201ENST00000466509 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
RPSAP48-201ENST00000466509 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
RPSAP48-201ENST00000466509 TARBP1Q13395 1621 aaKnown RBP12.58□□□□□ -0.4
RPSAP48-201ENST00000466509 CUX1P39880 1505 aa12.57□□□□□ -0.4
RPSAP48-201ENST00000466509 HOXD11P31277 338 aaPredicted RBP12.57□□□□□ -0.4
RPSAP48-201ENST00000466509 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
RPSAP48-201ENST00000466509 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
RPSAP48-201ENST00000466509 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
RPSAP48-201ENST00000466509 SOGA1O94964 1423 aa12.54□□□□□ -0.4
RPSAP48-201ENST00000466509 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
RPSAP48-201ENST00000466509 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
RPSAP48-201ENST00000466509 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPSAP48-201ENST00000466509 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
RPSAP48-201ENST00000466509 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.41
RPSAP48-201ENST00000466509 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
RPSAP48-201ENST00000466509 TDRD9Q8NDG6 1382 aaKnown RBP12.45□□□□□ -0.42
RPSAP48-201ENST00000466509 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
RPSAP48-201ENST00000466509 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
RPSAP48-201ENST00000466509 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
RPSAP48-201ENST00000466509 GRIN2BQ13224 1484 aa12.41□□□□□ -0.42
RPSAP48-201ENST00000466509 CHD1O14646 1710 aa12.41□□□□□ -0.42
RPSAP48-201ENST00000466509 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
RPSAP48-201ENST00000466509 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
RPSAP48-201ENST00000466509 PBRM1Q86U86 1689 aa12.4□□□□□ -0.42
RPSAP48-201ENST00000466509 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.43
RPSAP48-201ENST00000466509 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.43
RPSAP48-201ENST00000466509 FBLN2P98095 1184 aa12.35□□□□□ -0.43
RPSAP48-201ENST00000466509 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
RPSAP48-201ENST00000466509 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms