RNA–Protein interactions for RNA: ENST00000466477.5

LCLAT1-206, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-206ENST00000466477 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
LCLAT1-206ENST00000466477 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
LCLAT1-206ENST00000466477 ABCC9O60706 1549 aa33.06■■■□□ 2.88
LCLAT1-206ENST00000466477 DCAF8L2P0C7V8 631 aa31.42■■■□□ 2.62
LCLAT1-206ENST00000466477 RB1CC1Q8TDY2 1594 aa31.42■■■□□ 2.62
LCLAT1-206ENST00000466477 NACADO15069 1562 aa31.22■■■□□ 2.59
LCLAT1-206ENST00000466477 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
LCLAT1-206ENST00000466477 PABPN1Q86U42 306 aaKnown RBP eCLIP30.86■■■□□ 2.53
LCLAT1-206ENST00000466477 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
LCLAT1-206ENST00000466477 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
LCLAT1-206ENST00000466477 DNAJC5BQ9UF47 199 aa30.7■■■□□ 2.51
LCLAT1-206ENST00000466477 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
LCLAT1-206ENST00000466477 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
LCLAT1-206ENST00000466477 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
LCLAT1-206ENST00000466477 SHROOM4Q9ULL8 1493 aa29.96■■■□□ 2.39
LCLAT1-206ENST00000466477 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
LCLAT1-206ENST00000466477 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
LCLAT1-206ENST00000466477 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
LCLAT1-206ENST00000466477 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
LCLAT1-206ENST00000466477 ATAD2BQ9ULI0 1458 aa28.87■■■□□ 2.21
LCLAT1-206ENST00000466477 NCAPD3P42695 1498 aa28.82■■■□□ 2.2
LCLAT1-206ENST00000466477 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
LCLAT1-206ENST00000466477 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
LCLAT1-206ENST00000466477 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
LCLAT1-206ENST00000466477 HMGXB3Q12766 1538 aa28.66■■■□□ 2.18
LCLAT1-206ENST00000466477 BAZ1BQ9UIG0 1483 aaKnown RBP28.65■■■□□ 2.18
LCLAT1-206ENST00000466477 PEG3Q9GZU2 1588 aa28.53■■■□□ 2.16
LCLAT1-206ENST00000466477 ERCC6Q03468 1493 aa28.48■■■□□ 2.15
LCLAT1-206ENST00000466477 NESP48681 1621 aa28.48■■■□□ 2.15
LCLAT1-206ENST00000466477 WIZO95785 1651 aa28.38■■■□□ 2.13
LCLAT1-206ENST00000466477 CUX2O14529 1486 aa28.17■■■□□ 2.1
LCLAT1-206ENST00000466477 RSF1Q96T23 1441 aaPredicted RBP28.17■■■□□ 2.1
LCLAT1-206ENST00000466477 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
LCLAT1-206ENST00000466477 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
LCLAT1-206ENST00000466477 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
LCLAT1-206ENST00000466477 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
LCLAT1-206ENST00000466477 PDS5BQ9NTI5 1447 aa28■■■□□ 2.07
LCLAT1-206ENST00000466477 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
LCLAT1-206ENST00000466477 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
LCLAT1-206ENST00000466477 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
LCLAT1-206ENST00000466477 FANCD2Q9BXW9 1451 aa27.76■■■□□ 2.04
LCLAT1-206ENST00000466477 CEP164Q9UPV0 1460 aa27.76■■■□□ 2.04
LCLAT1-206ENST00000466477 CFTRP13569 1480 aa27.75■■■□□ 2.03
LCLAT1-206ENST00000466477 WDR62O43379 1518 aa27.69■■■□□ 2.02
LCLAT1-206ENST00000466477 CCDC88BA6NC98 1476 aa27.69■■■□□ 2.02
LCLAT1-206ENST00000466477 URB2Q14146 1524 aaKnown RBP27.54■■■□□ 2
LCLAT1-206ENST00000466477 PRDM2Q13029 1718 aa27.45■■□□□ 1.99
LCLAT1-206ENST00000466477 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
LCLAT1-206ENST00000466477 TOPBP1Q92547 1522 aa27.26■■□□□ 1.96
LCLAT1-206ENST00000466477 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.94
LCLAT1-206ENST00000466477 DNMBPQ6XZF7 1577 aa27.17■■□□□ 1.94
LCLAT1-206ENST00000466477 IFT140Q96RY7 1462 aa27.14■■□□□ 1.94
LCLAT1-206ENST00000466477 ABCC8Q09428 1581 aa27.06■■□□□ 1.92
LCLAT1-206ENST00000466477 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
LCLAT1-206ENST00000466477 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
LCLAT1-206ENST00000466477 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
LCLAT1-206ENST00000466477 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
LCLAT1-206ENST00000466477 AQRO60306 1485 aaKnown RBP eCLIP26.97■■□□□ 1.91
LCLAT1-206ENST00000466477 TARBP1Q13395 1621 aaKnown RBP26.97■■□□□ 1.91
LCLAT1-206ENST00000466477 OSCARQ8IYS5 282 aa26.95■■□□□ 1.9
LCLAT1-206ENST00000466477 CUX1P39880 1505 aa26.94■■□□□ 1.9
LCLAT1-206ENST00000466477 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
LCLAT1-206ENST00000466477 SOGA1O94964 1423 aa26.88■■□□□ 1.89
LCLAT1-206ENST00000466477 TDRD9Q8NDG6 1382 aaKnown RBP26.86■■□□□ 1.89
LCLAT1-206ENST00000466477 FBLN2P98095 1184 aa26.8■■□□□ 1.88
LCLAT1-206ENST00000466477 CHD1O14646 1710 aa26.75■■□□□ 1.87
LCLAT1-206ENST00000466477 SNAPC4Q5SXM2 1469 aa26.72■■□□□ 1.87
LCLAT1-206ENST00000466477 RIMBP3CA6NJZ7 1639 aa26.67■■□□□ 1.86
LCLAT1-206ENST00000466477 RIMBP3BA6NNM3 1639 aa26.67■■□□□ 1.86
LCLAT1-206ENST00000466477 RIMBP3Q9UFD9 1639 aa26.67■■□□□ 1.86
LCLAT1-206ENST00000466477 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
LCLAT1-206ENST00000466477 ARHGEF11O15085 1522 aa26.61■■□□□ 1.85
LCLAT1-206ENST00000466477 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
LCLAT1-206ENST00000466477 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
LCLAT1-206ENST00000466477 WRNQ14191 1432 aaPredicted RBP eCLIP26.58■■□□□ 1.85
LCLAT1-206ENST00000466477 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
LCLAT1-206ENST00000466477 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
LCLAT1-206ENST00000466477 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
LCLAT1-206ENST00000466477 CHMP7Q8WUX9 453 aaPredicted RBP26.54■■□□□ 1.84
LCLAT1-206ENST00000466477 MAGI1Q96QZ7 1491 aaPredicted RBP26.53■■□□□ 1.84
LCLAT1-206ENST00000466477 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
LCLAT1-206ENST00000466477 ABCA5Q8WWZ7 1642 aa26.51■■□□□ 1.83
LCLAT1-206ENST00000466477 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
LCLAT1-206ENST00000466477 SYNJ2O15056 1496 aa26.47■■□□□ 1.83
LCLAT1-206ENST00000466477 CYB5RLQ6IPT4 315 aa26.43■■□□□ 1.82
LCLAT1-206ENST00000466477 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
LCLAT1-206ENST00000466477 ARAP1Q96P48 1450 aa26.4■■□□□ 1.82
LCLAT1-206ENST00000466477 ADAMTS12P58397 1594 aa26.33■■□□□ 1.81
LCLAT1-206ENST00000466477 GRIN2AQ12879 1464 aa26.28■■□□□ 1.8
LCLAT1-206ENST00000466477 CEP170Q5SW79 1584 aa26.22■■□□□ 1.79
LCLAT1-206ENST00000466477 FHAD1B1AJZ9 1412 aa26.2■■□□□ 1.78
LCLAT1-206ENST00000466477 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
LCLAT1-206ENST00000466477 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
LCLAT1-206ENST00000466477 NUP160Q12769 1436 aa26.14■■□□□ 1.77
LCLAT1-206ENST00000466477 TRHP20396 242 aaPredicted RBP26.09■■□□□ 1.77
LCLAT1-206ENST00000466477 KIF27Q86VH2 1401 aa26.02■■□□□ 1.76
LCLAT1-206ENST00000466477 IGF1RP08069 1367 aa25.96■■□□□ 1.75
LCLAT1-206ENST00000466477 SHROOM2Q13796 1616 aa25.96■■□□□ 1.75
LCLAT1-206ENST00000466477 RUSC2Q8N2Y8 1516 aa25.96■■□□□ 1.75
LCLAT1-206ENST00000466477 PRG4Q92954 1404 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms