RNA–Protein interactions for RNA: ENST00000466407.1

ATP2B4-206, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-206ENST00000466407 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
ATP2B4-206ENST00000466407 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
ATP2B4-206ENST00000466407 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
ATP2B4-206ENST00000466407 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
ATP2B4-206ENST00000466407 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
ATP2B4-206ENST00000466407 ABCC9O60706 1549 aa13.13□□□□□ -0.31
ATP2B4-206ENST00000466407 NACADO15069 1562 aa13.13□□□□□ -0.31
ATP2B4-206ENST00000466407 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
ATP2B4-206ENST00000466407 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
ATP2B4-206ENST00000466407 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.38
ATP2B4-206ENST00000466407 SHROOM4Q9ULL8 1493 aa12.7□□□□□ -0.38
ATP2B4-206ENST00000466407 SCRIBQ14160 1630 aa12.64□□□□□ -0.39
ATP2B4-206ENST00000466407 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
ATP2B4-206ENST00000466407 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
ATP2B4-206ENST00000466407 SMARCA4P51532 1647 aa12.23□□□□□ -0.45
ATP2B4-206ENST00000466407 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
ATP2B4-206ENST00000466407 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
ATP2B4-206ENST00000466407 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
ATP2B4-206ENST00000466407 SMARCA2P51531 1590 aa12.16□□□□□ -0.46
ATP2B4-206ENST00000466407 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
ATP2B4-206ENST00000466407 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
ATP2B4-206ENST00000466407 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
ATP2B4-206ENST00000466407 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
ATP2B4-206ENST00000466407 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
ATP2B4-206ENST00000466407 NCAPD3P42695 1498 aa12.04□□□□□ -0.48
ATP2B4-206ENST00000466407 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
ATP2B4-206ENST00000466407 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.48
ATP2B4-206ENST00000466407 CC2D2AQ9P2K1 1620 aa12.02□□□□□ -0.49
ATP2B4-206ENST00000466407 WIZO95785 1651 aa12.01□□□□□ -0.49
ATP2B4-206ENST00000466407 BAZ1BQ9UIG0 1483 aaKnown RBP11.97□□□□□ -0.49
ATP2B4-206ENST00000466407 SUPT5HO00267 1087 aaKnown RBP11.87□□□□□ -0.51
ATP2B4-206ENST00000466407 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
ATP2B4-206ENST00000466407 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
ATP2B4-206ENST00000466407 LAMC3Q9Y6N6 1575 aa11.74□□□□□ -0.53
ATP2B4-206ENST00000466407 CFTRP13569 1480 aa11.69□□□□□ -0.54
ATP2B4-206ENST00000466407 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
ATP2B4-206ENST00000466407 PDS5BQ9NTI5 1447 aa11.59□□□□□ -0.55
ATP2B4-206ENST00000466407 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
ATP2B4-206ENST00000466407 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
ATP2B4-206ENST00000466407 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
ATP2B4-206ENST00000466407 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
ATP2B4-206ENST00000466407 KIF21AQ7Z4S6 1674 aa11.48□□□□□ -0.57
ATP2B4-206ENST00000466407 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
ATP2B4-206ENST00000466407 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
ATP2B4-206ENST00000466407 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
ATP2B4-206ENST00000466407 NESP48681 1621 aa11.45□□□□□ -0.58
ATP2B4-206ENST00000466407 MRC2Q9UBG0 1479 aa11.41□□□□□ -0.58
ATP2B4-206ENST00000466407 ERCC6Q03468 1493 aa11.4□□□□□ -0.58
ATP2B4-206ENST00000466407 WDR97A6NE52 1622 aa11.4□□□□□ -0.58
ATP2B4-206ENST00000466407 WDR62O43379 1518 aa11.4□□□□□ -0.59
ATP2B4-206ENST00000466407 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
ATP2B4-206ENST00000466407 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
ATP2B4-206ENST00000466407 CUX1P39880 1505 aa11.37□□□□□ -0.59
ATP2B4-206ENST00000466407 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
ATP2B4-206ENST00000466407 CHIC1Q5VXU3 224 aa11.36□□□□□ -0.59
ATP2B4-206ENST00000466407 EEA1Q15075 1411 aa11.35□□□□□ -0.59
ATP2B4-206ENST00000466407 URB2Q14146 1524 aaKnown RBP11.33□□□□□ -0.6
ATP2B4-206ENST00000466407 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
ATP2B4-206ENST00000466407 DNAJC5Q9H3Z4 198 aa11.32□□□□□ -0.6
ATP2B4-206ENST00000466407 CUX2O14529 1486 aa11.29□□□□□ -0.6
ATP2B4-206ENST00000466407 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
ATP2B4-206ENST00000466407 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
ATP2B4-206ENST00000466407 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
ATP2B4-206ENST00000466407 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
ATP2B4-206ENST00000466407 TARBP1Q13395 1621 aaKnown RBP11.25□□□□□ -0.61
ATP2B4-206ENST00000466407 KIF27Q86VH2 1401 aa11.23□□□□□ -0.61
ATP2B4-206ENST00000466407 ABCA5Q8WWZ7 1642 aa11.21□□□□□ -0.61
ATP2B4-206ENST00000466407 SOGA1O94964 1423 aa11.21□□□□□ -0.61
ATP2B4-206ENST00000466407 CUL7Q14999 1698 aa11.2□□□□□ -0.62
ATP2B4-206ENST00000466407 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
ATP2B4-206ENST00000466407 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
ATP2B4-206ENST00000466407 KIF21BO75037 1637 aa11.16□□□□□ -0.62
ATP2B4-206ENST00000466407 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
ATP2B4-206ENST00000466407 EIF4G3O43432 1585 aaKnown RBP11.13□□□□□ -0.63
ATP2B4-206ENST00000466407 GRIN2BQ13224 1484 aa11.12□□□□□ -0.63
ATP2B4-206ENST00000466407 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
ATP2B4-206ENST00000466407 RAD54L2Q9Y4B4 1467 aa11.12□□□□□ -0.63
ATP2B4-206ENST00000466407 PRXQ9BXM0 1461 aa11.08□□□□□ -0.64
ATP2B4-206ENST00000466407 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
ATP2B4-206ENST00000466407 ADAMTS12P58397 1594 aa11.07□□□□□ -0.64
ATP2B4-206ENST00000466407 GOLGA3Q08378 1498 aa11.06□□□□□ -0.64
ATP2B4-206ENST00000466407 FHAD1B1AJZ9 1412 aa11.05□□□□□ -0.64
ATP2B4-206ENST00000466407 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
ATP2B4-206ENST00000466407 IGF1RP08069 1367 aa11.04□□□□□ -0.64
ATP2B4-206ENST00000466407 CTTNBP2Q8WZ74 1663 aa11.02□□□□□ -0.64
ATP2B4-206ENST00000466407 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.65
ATP2B4-206ENST00000466407 CARMIL1Q5VZK9 1371 aa11.02□□□□□ -0.65
ATP2B4-206ENST00000466407 TDRD9Q8NDG6 1382 aaKnown RBP11.02□□□□□ -0.65
ATP2B4-206ENST00000466407 SYNJ2O15056 1496 aa11.01□□□□□ -0.65
ATP2B4-206ENST00000466407 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
ATP2B4-206ENST00000466407 AQRO60306 1485 aaKnown RBP eCLIP11□□□□□ -0.652e-8■■■■□ 25.4
ATP2B4-206ENST00000466407 SNAPC4Q5SXM2 1469 aa10.98□□□□□ -0.65
ATP2B4-206ENST00000466407 TNIKQ9UKE5 1360 aa10.97□□□□□ -0.65
ATP2B4-206ENST00000466407 GRIN2AQ12879 1464 aa10.95□□□□□ -0.66
ATP2B4-206ENST00000466407 CHD1O14646 1710 aa10.94□□□□□ -0.66
ATP2B4-206ENST00000466407 EFCAB5A4FU69 1503 aa10.93□□□□□ -0.66
ATP2B4-206ENST00000466407 NUP160Q12769 1436 aa10.92□□□□□ -0.66
ATP2B4-206ENST00000466407 IQGAP2Q13576 1575 aa10.9□□□□□ -0.66
ATP2B4-206ENST00000466407 KIAA0586Q9BVV6 1533 aa10.9□□□□□ -0.66
ATP2B4-206ENST00000466407 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms