RNA–Protein interactions for RNA: ENST00000466352.5

PRKCZ-206, Transcript of protein kinase C zeta, humanhuman

TSL 3

Gene PRKCZ, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-206ENST00000466352 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
PRKCZ-206ENST00000466352 CCDC180Q9P1Z9 1646 aa27.53■■■□□ 2
PRKCZ-206ENST00000466352 ABCC9O60706 1549 aa27.08■■□□□ 1.93
PRKCZ-206ENST00000466352 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
PRKCZ-206ENST00000466352 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
PRKCZ-206ENST00000466352 NACADO15069 1562 aa25.92■■□□□ 1.74
PRKCZ-206ENST00000466352 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
PRKCZ-206ENST00000466352 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
PRKCZ-206ENST00000466352 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
PRKCZ-206ENST00000466352 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
PRKCZ-206ENST00000466352 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
PRKCZ-206ENST00000466352 PABPN1Q86U42 306 aaKnown RBP eCLIP25.28■■□□□ 1.64
PRKCZ-206ENST00000466352 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
PRKCZ-206ENST00000466352 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
PRKCZ-206ENST00000466352 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
PRKCZ-206ENST00000466352 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
PRKCZ-206ENST00000466352 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
PRKCZ-206ENST00000466352 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
PRKCZ-206ENST00000466352 SMARCA4P51532 1647 aa24.07■■□□□ 1.44
PRKCZ-206ENST00000466352 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
PRKCZ-206ENST00000466352 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
PRKCZ-206ENST00000466352 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
PRKCZ-206ENST00000466352 MROH2BQ7Z745 1585 aa23.96■■□□□ 1.43
PRKCZ-206ENST00000466352 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
PRKCZ-206ENST00000466352 PEG3Q9GZU2 1588 aa23.85■■□□□ 1.41
PRKCZ-206ENST00000466352 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
PRKCZ-206ENST00000466352 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
PRKCZ-206ENST00000466352 RSF1Q96T23 1441 aaPredicted RBP23.72■■□□□ 1.39
PRKCZ-206ENST00000466352 WIZO95785 1651 aa23.68■■□□□ 1.38
PRKCZ-206ENST00000466352 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
PRKCZ-206ENST00000466352 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
PRKCZ-206ENST00000466352 NESP48681 1621 aa23.37■■□□□ 1.33
PRKCZ-206ENST00000466352 CUX2O14529 1486 aa23.37■■□□□ 1.33
PRKCZ-206ENST00000466352 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
PRKCZ-206ENST00000466352 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
PRKCZ-206ENST00000466352 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
PRKCZ-206ENST00000466352 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
PRKCZ-206ENST00000466352 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
PRKCZ-206ENST00000466352 PDS5BQ9NTI5 1447 aa23.15■■□□□ 1.3
PRKCZ-206ENST00000466352 CFTRP13569 1480 aa23.13■■□□□ 1.29
PRKCZ-206ENST00000466352 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
PRKCZ-206ENST00000466352 KIF21AQ7Z4S6 1674 aa23.03■■□□□ 1.28
PRKCZ-206ENST00000466352 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
PRKCZ-206ENST00000466352 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
PRKCZ-206ENST00000466352 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.25
PRKCZ-206ENST00000466352 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
PRKCZ-206ENST00000466352 WDR62O43379 1518 aa22.8■■□□□ 1.24
PRKCZ-206ENST00000466352 URB2Q14146 1524 aaKnown RBP22.76■■□□□ 1.23
PRKCZ-206ENST00000466352 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
PRKCZ-206ENST00000466352 ABCC8Q09428 1581 aa22.61■■□□□ 1.21
PRKCZ-206ENST00000466352 DNMBPQ6XZF7 1577 aa22.57■■□□□ 1.2
PRKCZ-206ENST00000466352 CUX1P39880 1505 aa22.47■■□□□ 1.19
PRKCZ-206ENST00000466352 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
PRKCZ-206ENST00000466352 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
PRKCZ-206ENST00000466352 ZNF608Q9ULD9 1512 aaPredicted RBP22.38■■□□□ 1.17
PRKCZ-206ENST00000466352 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
PRKCZ-206ENST00000466352 SOGA1O94964 1423 aa22.37■■□□□ 1.17
PRKCZ-206ENST00000466352 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
PRKCZ-206ENST00000466352 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
PRKCZ-206ENST00000466352 WRNQ14191 1432 aaPredicted RBP eCLIP22.34■■□□□ 1.17
PRKCZ-206ENST00000466352 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
PRKCZ-206ENST00000466352 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.16
PRKCZ-206ENST00000466352 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
PRKCZ-206ENST00000466352 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
PRKCZ-206ENST00000466352 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
PRKCZ-206ENST00000466352 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
PRKCZ-206ENST00000466352 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
PRKCZ-206ENST00000466352 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
PRKCZ-206ENST00000466352 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
PRKCZ-206ENST00000466352 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
PRKCZ-206ENST00000466352 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
PRKCZ-206ENST00000466352 GRIN2BQ13224 1484 aa22.07■■□□□ 1.12
PRKCZ-206ENST00000466352 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
PRKCZ-206ENST00000466352 SNAPC4Q5SXM2 1469 aa22.03■■□□□ 1.12
PRKCZ-206ENST00000466352 FBLN2P98095 1184 aa22.01■■□□□ 1.11
PRKCZ-206ENST00000466352 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
PRKCZ-206ENST00000466352 RIMBP3CA6NJZ7 1639 aa21.98■■□□□ 1.11
PRKCZ-206ENST00000466352 RIMBP3BA6NNM3 1639 aa21.98■■□□□ 1.11
PRKCZ-206ENST00000466352 RIMBP3Q9UFD9 1639 aa21.98■■□□□ 1.11
PRKCZ-206ENST00000466352 PBRM1Q86U86 1689 aa21.97■■□□□ 1.11
PRKCZ-206ENST00000466352 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
PRKCZ-206ENST00000466352 CHD1O14646 1710 aa21.94■■□□□ 1.1
PRKCZ-206ENST00000466352 ARHGEF11O15085 1522 aa21.93■■□□□ 1.1
PRKCZ-206ENST00000466352 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
PRKCZ-206ENST00000466352 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
PRKCZ-206ENST00000466352 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
PRKCZ-206ENST00000466352 IGF1RP08069 1367 aa21.84■■□□□ 1.09
PRKCZ-206ENST00000466352 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
PRKCZ-206ENST00000466352 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
PRKCZ-206ENST00000466352 GRIN2AQ12879 1464 aa21.78■■□□□ 1.08
PRKCZ-206ENST00000466352 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
PRKCZ-206ENST00000466352 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
PRKCZ-206ENST00000466352 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
PRKCZ-206ENST00000466352 ARAP1Q96P48 1450 aa21.72■■□□□ 1.07
PRKCZ-206ENST00000466352 NUP160Q12769 1436 aa21.7■■□□□ 1.06
PRKCZ-206ENST00000466352 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
PRKCZ-206ENST00000466352 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
PRKCZ-206ENST00000466352 CEP170Q5SW79 1584 aa21.66■■□□□ 1.06
PRKCZ-206ENST00000466352 CUL7Q14999 1698 aa21.66■■□□□ 1.06
PRKCZ-206ENST00000466352 RAPGEF2Q9Y4G8 1499 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms