RNA–Protein interactions for RNA: ENST00000466335.1

HACD1-203, Transcript of 3-hydroxyacyl-CoA dehydratase 1, humanhuman

TSL 2

Gene HACD1, Length 717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD1-203ENST00000466335 NISCHQ9Y2I1 1504 aa51.99■■■■■ 5.91
HACD1-203ENST00000466335 CCDC180Q9P1Z9 1646 aa46.85■■■■■ 5.09
HACD1-203ENST00000466335 ABCC9O60706 1549 aa46.74■■■■■ 5.07
HACD1-203ENST00000466335 RB1CC1Q8TDY2 1594 aa44.57■■■■■ 4.73
HACD1-203ENST00000466335 NACADO15069 1562 aa44.23■■■■■ 4.67
HACD1-203ENST00000466335 DNAJC5BQ9UF47 199 aa43.77■■■■■ 4.6
HACD1-203ENST00000466335 DCAF8L2P0C7V8 631 aa43.75■■■■■ 4.59
HACD1-203ENST00000466335 UNC13AQ9UPW8 1703 aa43.62■■■■■ 4.57
HACD1-203ENST00000466335 MYO15BQ96JP2 1530 aa43.61■■■■■ 4.57
HACD1-203ENST00000466335 PABPN1Q86U42 306 aaKnown RBP eCLIP43.39■■■■■ 4.54
HACD1-203ENST00000466335 BICRAQ9NZM4 1560 aa43.21■■■■■ 4.51
HACD1-203ENST00000466335 ZCCHC6Q5VYS8 1495 aaKnown RBP43.1■■■■■ 4.49
HACD1-203ENST00000466335 DCAF1Q9Y4B6 1507 aa43.01■■■■■ 4.48
HACD1-203ENST00000466335 SHROOM4Q9ULL8 1493 aa42.74■■■■■ 4.43
HACD1-203ENST00000466335 SCRIBQ14160 1630 aa42.58■■■■■ 4.41
HACD1-203ENST00000466335 CC2D2AQ9P2K1 1620 aa42.29■■■■■ 4.36
HACD1-203ENST00000466335 EIF4G1Q04637 1599 aaKnown RBP42.18■■■■■ 4.34
HACD1-203ENST00000466335 CECR2Q9BXF3 1484 aa42.14■■■■■ 4.34
HACD1-203ENST00000466335 NCAPD3P42695 1498 aa40.76■■■■■ 4.12
HACD1-203ENST00000466335 SMARCA4P51532 1647 aa40.64■■■■■ 4.1
HACD1-203ENST00000466335 ATAD2BQ9ULI0 1458 aa40.62■■■■■ 4.09
HACD1-203ENST00000466335 SMARCA2P51531 1590 aa40.59■■■■■ 4.09
HACD1-203ENST00000466335 HMGXB3Q12766 1538 aa40.55■■■■■ 4.08
HACD1-203ENST00000466335 CUX2O14529 1486 aa40.42■■■■■ 4.06
HACD1-203ENST00000466335 ERCC6Q03468 1493 aa40.42■■■■■ 4.06
HACD1-203ENST00000466335 BAZ1AQ9NRL2 1556 aaPredicted RBP40.42■■■■■ 4.06
HACD1-203ENST00000466335 DNAJC5Q9H3Z4 198 aa40.35■■■■■ 4.05
HACD1-203ENST00000466335 BAZ1BQ9UIG0 1483 aaKnown RBP40.26■■■■■ 4.04
HACD1-203ENST00000466335 PEG3Q9GZU2 1588 aa40.26■■■■■ 4.04
HACD1-203ENST00000466335 NESP48681 1621 aa40.12■■■■■ 4.01
HACD1-203ENST00000466335 MROH2BQ7Z745 1585 aa40.02■■■■■ 4
HACD1-203ENST00000466335 LAMC3Q9Y6N6 1575 aa39.95■■■■□ 3.99
HACD1-203ENST00000466335 THOC2Q8NI27 1593 aaKnown RBP39.86■■■■□ 3.97
HACD1-203ENST00000466335 KIF21AQ7Z4S6 1674 aa39.73■■■■□ 3.95
HACD1-203ENST00000466335 PDS5BQ9NTI5 1447 aa39.65■■■■□ 3.94
HACD1-203ENST00000466335 WIZO95785 1651 aa39.59■■■■□ 3.93
HACD1-203ENST00000466335 CADPSQ9ULU8 1353 aa39.49■■■■□ 3.91
HACD1-203ENST00000466335 MRC2Q9UBG0 1479 aa39.34■■■■□ 3.89
HACD1-203ENST00000466335 WDR62O43379 1518 aa39.27■■■■□ 3.88
HACD1-203ENST00000466335 CEP164Q9UPV0 1460 aa39.17■■■■□ 3.86
HACD1-203ENST00000466335 RSF1Q96T23 1441 aaPredicted RBP39.13■■■■□ 3.85
HACD1-203ENST00000466335 TOP2AP11388 1531 aaKnown RBP39.12■■■■□ 3.85
HACD1-203ENST00000466335 FANCD2Q9BXW9 1451 aa39.08■■■■□ 3.85
HACD1-203ENST00000466335 CFTRP13569 1480 aa39.05■■■■□ 3.84
HACD1-203ENST00000466335 PRDM2Q13029 1718 aa38.87■■■■□ 3.81
HACD1-203ENST00000466335 URB2Q14146 1524 aaKnown RBP38.75■■■■□ 3.79
HACD1-203ENST00000466335 CCDC88BA6NC98 1476 aa38.58■■■■□ 3.77
HACD1-203ENST00000466335 TRIM41Q8WV44 630 aa38.53■■■■□ 3.76
HACD1-203ENST00000466335 OSCARQ8IYS5 282 aa38.42■■■■□ 3.74
HACD1-203ENST00000466335 IFT140Q96RY7 1462 aa38.38■■■■□ 3.73
HACD1-203ENST00000466335 TOPBP1Q92547 1522 aa38.34■■■■□ 3.73
HACD1-203ENST00000466335 ABCC8Q09428 1581 aa38.29■■■■□ 3.72
HACD1-203ENST00000466335 ZNF608Q9ULD9 1512 aaPredicted RBP38.27■■■■□ 3.72
HACD1-203ENST00000466335 DNMBPQ6XZF7 1577 aa38.25■■■■□ 3.71
HACD1-203ENST00000466335 EIF4G3O43432 1585 aaKnown RBP38.17■■■■□ 3.7
HACD1-203ENST00000466335 RIMBP3CA6NJZ7 1639 aa38.06■■■■□ 3.68
HACD1-203ENST00000466335 RIMBP3BA6NNM3 1639 aa38.06■■■■□ 3.68
HACD1-203ENST00000466335 RIMBP3Q9UFD9 1639 aa38.06■■■■□ 3.68
HACD1-203ENST00000466335 TARBP1Q13395 1621 aaKnown RBP38.05■■■■□ 3.68
HACD1-203ENST00000466335 POLA1P09884 1462 aaPredicted RBP37.94■■■■□ 3.66
HACD1-203ENST00000466335 CHD1O14646 1710 aa37.92■■■■□ 3.66
HACD1-203ENST00000466335 ARHGEF11O15085 1522 aa37.91■■■■□ 3.66
HACD1-203ENST00000466335 AQRO60306 1485 aaKnown RBP eCLIP37.88■■■■□ 3.65
HACD1-203ENST00000466335 WDR97A6NE52 1622 aa37.75■■■■□ 3.63
HACD1-203ENST00000466335 RAD54L2Q9Y4B4 1467 aa37.74■■■■□ 3.63
HACD1-203ENST00000466335 SOGA1O94964 1423 aa37.71■■■■□ 3.63
HACD1-203ENST00000466335 SUPT5HO00267 1087 aaKnown RBP37.69■■■■□ 3.62
HACD1-203ENST00000466335 FGD5Q6ZNL6 1462 aa37.69■■■■□ 3.62
HACD1-203ENST00000466335 CUX1P39880 1505 aa37.63■■■■□ 3.61
HACD1-203ENST00000466335 TDRD9Q8NDG6 1382 aaKnown RBP37.61■■■■□ 3.61
HACD1-203ENST00000466335 FBLN2P98095 1184 aa37.61■■■■□ 3.61
HACD1-203ENST00000466335 SNAPC4Q5SXM2 1469 aa37.57■■■■□ 3.6
HACD1-203ENST00000466335 ARAP1Q96P48 1450 aa37.51■■■■□ 3.59
HACD1-203ENST00000466335 CYB5RLQ6IPT4 315 aa37.5■■■■□ 3.59
HACD1-203ENST00000466335 MAGI1Q96QZ7 1491 aaPredicted RBP37.5■■■■□ 3.59
HACD1-203ENST00000466335 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
HACD1-203ENST00000466335 SYNJ1O43426 1573 aa37.44■■■■□ 3.58
HACD1-203ENST00000466335 CLASP1Q7Z460 1538 aa37.44■■■■□ 3.58
HACD1-203ENST00000466335 PBRM1Q86U86 1689 aa37.42■■■■□ 3.58
HACD1-203ENST00000466335 SYNJ2O15056 1496 aa37.36■■■■□ 3.57
HACD1-203ENST00000466335 CHMP7Q8WUX9 453 aaPredicted RBP37.35■■■■□ 3.57
HACD1-203ENST00000466335 GAPVD1Q14C86 1478 aa37.3■■■■□ 3.56
HACD1-203ENST00000466335 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
HACD1-203ENST00000466335 ABCA10Q8WWZ4 1543 aa37.28■■■■□ 3.56
HACD1-203ENST00000466335 TRHP20396 242 aaPredicted RBP37.13■■■■□ 3.53
HACD1-203ENST00000466335 BIVM-ERCC5R4GMW8 1640 aa37.11■■■■□ 3.53
HACD1-203ENST00000466335 WRNQ14191 1432 aaPredicted RBP eCLIP37.08■■■■□ 3.53
HACD1-203ENST00000466335 TOP2BQ02880 1626 aa37.07■■■■□ 3.52
HACD1-203ENST00000466335 ADAMTS12P58397 1594 aa37.01■■■■□ 3.52
HACD1-203ENST00000466335 GRIN2AQ12879 1464 aa36.98■■■■□ 3.51
HACD1-203ENST00000466335 CEP170Q5SW79 1584 aa36.87■■■■□ 3.49
HACD1-203ENST00000466335 NUP160Q12769 1436 aa36.85■■■■□ 3.49
HACD1-203ENST00000466335 ERICH3Q5RHP9 1530 aa36.84■■■■□ 3.49
HACD1-203ENST00000466335 FHAD1B1AJZ9 1412 aa36.83■■■■□ 3.49
HACD1-203ENST00000466335 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
HACD1-203ENST00000466335 SHROOM2Q13796 1616 aa36.77■■■■□ 3.48
HACD1-203ENST00000466335 RUSC2Q8N2Y8 1516 aa36.49■■■■□ 3.43
HACD1-203ENST00000466335 PRG4Q92954 1404 aaPredicted RBP36.46■■■■□ 3.43
HACD1-203ENST00000466335 JPH4Q96JJ6 628 aa36.37■■■■□ 3.41
HACD1-203ENST00000466335 CUL7Q14999 1698 aa36.35■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms