RNA–Protein interactions for RNA: ENST00000466322.5

RAPGEF3-206, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-206ENST00000466322 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
RAPGEF3-206ENST00000466322 CCDC180Q9P1Z9 1646 aa36.08■■■■□ 3.37
RAPGEF3-206ENST00000466322 ABCC9O60706 1549 aa35.54■■■■□ 3.28
RAPGEF3-206ENST00000466322 DCAF8L2P0C7V8 631 aa34.08■■■■□ 3.05
RAPGEF3-206ENST00000466322 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
RAPGEF3-206ENST00000466322 NACADO15069 1562 aa33.94■■■■□ 3.02
RAPGEF3-206ENST00000466322 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
RAPGEF3-206ENST00000466322 MYO15BQ96JP2 1530 aa33.6■■■□□ 2.97
RAPGEF3-206ENST00000466322 DCAF1Q9Y4B6 1507 aa33.43■■■□□ 2.94
RAPGEF3-206ENST00000466322 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
RAPGEF3-206ENST00000466322 PABPN1Q86U42 306 aaKnown RBP eCLIP33.22■■■□□ 2.91
RAPGEF3-206ENST00000466322 BICRAQ9NZM4 1560 aa33.06■■■□□ 2.88
RAPGEF3-206ENST00000466322 SCRIBQ14160 1630 aa33.01■■■□□ 2.87
RAPGEF3-206ENST00000466322 DNAJC5BQ9UF47 199 aa32.78■■■□□ 2.84
RAPGEF3-206ENST00000466322 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.79
RAPGEF3-206ENST00000466322 EIF4G1Q04637 1599 aaKnown RBP32.18■■■□□ 2.74
RAPGEF3-206ENST00000466322 CC2D2AQ9P2K1 1620 aa32.13■■■□□ 2.73
RAPGEF3-206ENST00000466322 CECR2Q9BXF3 1484 aa31.9■■■□□ 2.7
RAPGEF3-206ENST00000466322 SMARCA4P51532 1647 aa31.51■■■□□ 2.63
RAPGEF3-206ENST00000466322 BAZ1AQ9NRL2 1556 aaPredicted RBP31.4■■■□□ 2.62
RAPGEF3-206ENST00000466322 ATAD2BQ9ULI0 1458 aa31.33■■■□□ 2.61
RAPGEF3-206ENST00000466322 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
RAPGEF3-206ENST00000466322 SMARCA2P51531 1590 aa31.27■■■□□ 2.6
RAPGEF3-206ENST00000466322 MROH2BQ7Z745 1585 aa31.27■■■□□ 2.6
RAPGEF3-206ENST00000466322 HMGXB3Q12766 1538 aa31.14■■■□□ 2.57
RAPGEF3-206ENST00000466322 PEG3Q9GZU2 1588 aa31.12■■■□□ 2.57
RAPGEF3-206ENST00000466322 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
RAPGEF3-206ENST00000466322 WIZO95785 1651 aa30.99■■■□□ 2.55
RAPGEF3-206ENST00000466322 RSF1Q96T23 1441 aaPredicted RBP30.82■■■□□ 2.52
RAPGEF3-206ENST00000466322 NESP48681 1621 aa30.73■■■□□ 2.51
RAPGEF3-206ENST00000466322 ERCC6Q03468 1493 aa30.6■■■□□ 2.49
RAPGEF3-206ENST00000466322 TOP2AP11388 1531 aaKnown RBP30.54■■■□□ 2.48
RAPGEF3-206ENST00000466322 LAMC3Q9Y6N6 1575 aa30.54■■■□□ 2.48
RAPGEF3-206ENST00000466322 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
RAPGEF3-206ENST00000466322 KIF21AQ7Z4S6 1674 aa30.39■■■□□ 2.45
RAPGEF3-206ENST00000466322 PDS5BQ9NTI5 1447 aa30.31■■■□□ 2.44
RAPGEF3-206ENST00000466322 CUX2O14529 1486 aa30.26■■■□□ 2.44
RAPGEF3-206ENST00000466322 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
RAPGEF3-206ENST00000466322 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
RAPGEF3-206ENST00000466322 CFTRP13569 1480 aa30.19■■■□□ 2.42
RAPGEF3-206ENST00000466322 FANCD2Q9BXW9 1451 aa30.09■■■□□ 2.41
RAPGEF3-206ENST00000466322 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
RAPGEF3-206ENST00000466322 PRDM2Q13029 1718 aa30.05■■■□□ 2.4
RAPGEF3-206ENST00000466322 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
RAPGEF3-206ENST00000466322 MRC2Q9UBG0 1479 aa30.03■■■□□ 2.4
RAPGEF3-206ENST00000466322 WDR62O43379 1518 aa29.93■■■□□ 2.38
RAPGEF3-206ENST00000466322 URB2Q14146 1524 aaKnown RBP29.81■■■□□ 2.36
RAPGEF3-206ENST00000466322 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
RAPGEF3-206ENST00000466322 DNAJC5Q9H3Z4 198 aa29.57■■■□□ 2.32
RAPGEF3-206ENST00000466322 DNMBPQ6XZF7 1577 aa29.54■■■□□ 2.32
RAPGEF3-206ENST00000466322 ABCC8Q09428 1581 aa29.52■■■□□ 2.32
RAPGEF3-206ENST00000466322 IFT140Q96RY7 1462 aa29.4■■■□□ 2.3
RAPGEF3-206ENST00000466322 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
RAPGEF3-206ENST00000466322 CUX1P39880 1505 aa29.34■■■□□ 2.29
RAPGEF3-206ENST00000466322 POLA1P09884 1462 aaPredicted RBP29.33■■■□□ 2.29
RAPGEF3-206ENST00000466322 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
RAPGEF3-206ENST00000466322 FGD5Q6ZNL6 1462 aa29.26■■■□□ 2.27
RAPGEF3-206ENST00000466322 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
RAPGEF3-206ENST00000466322 EIF4G3O43432 1585 aaKnown RBP29.23■■■□□ 2.27
RAPGEF3-206ENST00000466322 SOGA1O94964 1423 aa29.22■■■□□ 2.27
RAPGEF3-206ENST00000466322 AQRO60306 1485 aaKnown RBP eCLIP29.18■■■□□ 2.26
RAPGEF3-206ENST00000466322 TDRD9Q8NDG6 1382 aaKnown RBP29.11■■■□□ 2.25
RAPGEF3-206ENST00000466322 WRNQ14191 1432 aaPredicted RBP eCLIP29.06■■■□□ 2.24
RAPGEF3-206ENST00000466322 SYNJ1O43426 1573 aa29.05■■■□□ 2.24
RAPGEF3-206ENST00000466322 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
RAPGEF3-206ENST00000466322 WDR97A6NE52 1622 aa29.04■■■□□ 2.24
RAPGEF3-206ENST00000466322 BIVM-ERCC5R4GMW8 1640 aa29.04■■■□□ 2.24
RAPGEF3-206ENST00000466322 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
RAPGEF3-206ENST00000466322 CHD1O14646 1710 aa28.97■■■□□ 2.23
RAPGEF3-206ENST00000466322 ABCA10Q8WWZ4 1543 aa28.91■■■□□ 2.22
RAPGEF3-206ENST00000466322 FBLN2P98095 1184 aa28.91■■■□□ 2.22
RAPGEF3-206ENST00000466322 PBRM1Q86U86 1689 aa28.9■■■□□ 2.22
RAPGEF3-206ENST00000466322 SNAPC4Q5SXM2 1469 aa28.88■■■□□ 2.21
RAPGEF3-206ENST00000466322 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
RAPGEF3-206ENST00000466322 GRIN2BQ13224 1484 aa28.86■■■□□ 2.21
RAPGEF3-206ENST00000466322 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
RAPGEF3-206ENST00000466322 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
RAPGEF3-206ENST00000466322 CHMP7Q8WUX9 453 aaPredicted RBP28.75■■■□□ 2.19
RAPGEF3-206ENST00000466322 SYNJ2O15056 1496 aa28.69■■■□□ 2.18
RAPGEF3-206ENST00000466322 RIMBP3CA6NJZ7 1639 aa28.65■■■□□ 2.18
RAPGEF3-206ENST00000466322 RIMBP3BA6NNM3 1639 aa28.65■■■□□ 2.18
RAPGEF3-206ENST00000466322 RIMBP3Q9UFD9 1639 aa28.65■■■□□ 2.18
RAPGEF3-206ENST00000466322 TRIM41Q8WV44 630 aa28.64■■■□□ 2.18
RAPGEF3-206ENST00000466322 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
RAPGEF3-206ENST00000466322 ARHGEF11O15085 1522 aa28.58■■■□□ 2.17
RAPGEF3-206ENST00000466322 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
RAPGEF3-206ENST00000466322 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
RAPGEF3-206ENST00000466322 GRIN2AQ12879 1464 aa28.5■■■□□ 2.15
RAPGEF3-206ENST00000466322 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
RAPGEF3-206ENST00000466322 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
RAPGEF3-206ENST00000466322 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
RAPGEF3-206ENST00000466322 CYB5RLQ6IPT4 315 aa28.38■■■□□ 2.13
RAPGEF3-206ENST00000466322 IGF1RP08069 1367 aa28.37■■■□□ 2.13
RAPGEF3-206ENST00000466322 NUP160Q12769 1436 aa28.35■■■□□ 2.13
RAPGEF3-206ENST00000466322 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
RAPGEF3-206ENST00000466322 CUL7Q14999 1698 aa28.31■■■□□ 2.12
RAPGEF3-206ENST00000466322 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
RAPGEF3-206ENST00000466322 ERCC6L2Q5T890 1561 aa28.22■■■□□ 2.11
RAPGEF3-206ENST00000466322 CARMIL1Q5VZK9 1371 aa28.21■■■□□ 2.11
RAPGEF3-206ENST00000466322 SHROOM2Q13796 1616 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms