RNA–Protein interactions for RNA: ENST00000466169.3

RN7SL35P-201, Transcript of RNA, 7SL, cytoplasmic 35, pseudogene, humanhuman

BASIC

Gene RN7SL35P, Length 292 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL35P-201ENST00000466169 NISCHQ9Y2I1 1504 aa21.82■■□□□ 1.08
RN7SL35P-201ENST00000466169 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
RN7SL35P-201ENST00000466169 ABCC9O60706 1549 aa19.08■□□□□ 0.64
RN7SL35P-201ENST00000466169 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
RN7SL35P-201ENST00000466169 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
RN7SL35P-201ENST00000466169 NACADO15069 1562 aa18.24■□□□□ 0.51
RN7SL35P-201ENST00000466169 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
RN7SL35P-201ENST00000466169 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
RN7SL35P-201ENST00000466169 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
RN7SL35P-201ENST00000466169 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
RN7SL35P-201ENST00000466169 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
RN7SL35P-201ENST00000466169 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
RN7SL35P-201ENST00000466169 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
RN7SL35P-201ENST00000466169 SHROOM4Q9ULL8 1493 aa17.46■□□□□ 0.39
RN7SL35P-201ENST00000466169 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
RN7SL35P-201ENST00000466169 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
RN7SL35P-201ENST00000466169 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
RN7SL35P-201ENST00000466169 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
RN7SL35P-201ENST00000466169 SMARCA4P51532 1647 aa17■□□□□ 0.31
RN7SL35P-201ENST00000466169 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
RN7SL35P-201ENST00000466169 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
RN7SL35P-201ENST00000466169 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
RN7SL35P-201ENST00000466169 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
RN7SL35P-201ENST00000466169 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.28
RN7SL35P-201ENST00000466169 HMGXB3Q12766 1538 aa16.76■□□□□ 0.27
RN7SL35P-201ENST00000466169 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
RN7SL35P-201ENST00000466169 WIZO95785 1651 aa16.75■□□□□ 0.27
RN7SL35P-201ENST00000466169 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
RN7SL35P-201ENST00000466169 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
RN7SL35P-201ENST00000466169 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
RN7SL35P-201ENST00000466169 NESP48681 1621 aa16.49■□□□□ 0.23
RN7SL35P-201ENST00000466169 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
RN7SL35P-201ENST00000466169 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
RN7SL35P-201ENST00000466169 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
RN7SL35P-201ENST00000466169 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
RN7SL35P-201ENST00000466169 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
RN7SL35P-201ENST00000466169 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
RN7SL35P-201ENST00000466169 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
RN7SL35P-201ENST00000466169 PDS5BQ9NTI5 1447 aa16.27■□□□□ 0.19
RN7SL35P-201ENST00000466169 THOC2Q8NI27 1593 aaKnown RBP16.26■□□□□ 0.19
RN7SL35P-201ENST00000466169 CFTRP13569 1480 aa16.21■□□□□ 0.19
RN7SL35P-201ENST00000466169 CEP164Q9UPV0 1460 aa16.2■□□□□ 0.18
RN7SL35P-201ENST00000466169 FANCD2Q9BXW9 1451 aa16.19■□□□□ 0.18
RN7SL35P-201ENST00000466169 CUX2O14529 1486 aa16.18■□□□□ 0.18
RN7SL35P-201ENST00000466169 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
RN7SL35P-201ENST00000466169 WDR62O43379 1518 aa16.09■□□□□ 0.17
RN7SL35P-201ENST00000466169 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
RN7SL35P-201ENST00000466169 DNMBPQ6XZF7 1577 aa15.94■□□□□ 0.14
RN7SL35P-201ENST00000466169 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
RN7SL35P-201ENST00000466169 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
RN7SL35P-201ENST00000466169 CUX1P39880 1505 aa15.82■□□□□ 0.12
RN7SL35P-201ENST00000466169 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
RN7SL35P-201ENST00000466169 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
RN7SL35P-201ENST00000466169 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
RN7SL35P-201ENST00000466169 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
RN7SL35P-201ENST00000466169 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
RN7SL35P-201ENST00000466169 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
RN7SL35P-201ENST00000466169 RAD54L2Q9Y4B4 1467 aa15.75■□□□□ 0.11
RN7SL35P-201ENST00000466169 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
RN7SL35P-201ENST00000466169 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
RN7SL35P-201ENST00000466169 SOGA1O94964 1423 aa15.71■□□□□ 0.11
RN7SL35P-201ENST00000466169 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.11
RN7SL35P-201ENST00000466169 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
RN7SL35P-201ENST00000466169 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
RN7SL35P-201ENST00000466169 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.1
RN7SL35P-201ENST00000466169 PBRM1Q86U86 1689 aa15.65■□□□□ 0.1
RN7SL35P-201ENST00000466169 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
RN7SL35P-201ENST00000466169 CHD1O14646 1710 aa15.63■□□□□ 0.09
RN7SL35P-201ENST00000466169 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
RN7SL35P-201ENST00000466169 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
RN7SL35P-201ENST00000466169 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
RN7SL35P-201ENST00000466169 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
RN7SL35P-201ENST00000466169 FBLN2P98095 1184 aa15.56■□□□□ 0.08
RN7SL35P-201ENST00000466169 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
RN7SL35P-201ENST00000466169 GRIN2BQ13224 1484 aa15.53■□□□□ 0.08
RN7SL35P-201ENST00000466169 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
RN7SL35P-201ENST00000466169 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
RN7SL35P-201ENST00000466169 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
RN7SL35P-201ENST00000466169 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
RN7SL35P-201ENST00000466169 SYNJ2O15056 1496 aa15.44■□□□□ 0.06
RN7SL35P-201ENST00000466169 ERICH3Q5RHP9 1530 aa15.4■□□□□ 0.06
RN7SL35P-201ENST00000466169 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
RN7SL35P-201ENST00000466169 TRIM41Q8WV44 630 aa15.37■□□□□ 0.05
RN7SL35P-201ENST00000466169 RIMBP3CA6NJZ7 1639 aa15.36■□□□□ 0.05
RN7SL35P-201ENST00000466169 RIMBP3BA6NNM3 1639 aa15.36■□□□□ 0.05
RN7SL35P-201ENST00000466169 RIMBP3Q9UFD9 1639 aa15.36■□□□□ 0.05
RN7SL35P-201ENST00000466169 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
RN7SL35P-201ENST00000466169 CUL7Q14999 1698 aa15.34■□□□□ 0.05
RN7SL35P-201ENST00000466169 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
RN7SL35P-201ENST00000466169 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.04
RN7SL35P-201ENST00000466169 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
RN7SL35P-201ENST00000466169 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
RN7SL35P-201ENST00000466169 RUSC2Q8N2Y8 1516 aa15.27■□□□□ 0.03
RN7SL35P-201ENST00000466169 IGF1RP08069 1367 aa15.24■□□□□ 0.03
RN7SL35P-201ENST00000466169 NUP160Q12769 1436 aa15.22■□□□□ 0.03
RN7SL35P-201ENST00000466169 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
RN7SL35P-201ENST00000466169 ARAP1Q96P48 1450 aa15.18■□□□□ 0.02
RN7SL35P-201ENST00000466169 ERCC6L2Q5T890 1561 aa15.17■□□□□ 0.02
RN7SL35P-201ENST00000466169 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
RN7SL35P-201ENST00000466169 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms