RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
PRKCB-204ENST00000466124 CHIC1Q5VXU3 224 aa14.86□□□□□ -0.03
PRKCB-204ENST00000466124 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
PRKCB-204ENST00000466124 ABCC9O60706 1549 aa13.19□□□□□ -0.3
PRKCB-204ENST00000466124 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-204ENST00000466124 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
PRKCB-204ENST00000466124 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
PRKCB-204ENST00000466124 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
PRKCB-204ENST00000466124 RB1CC1Q8TDY2 1594 aa12.45□□□□□ -0.42
PRKCB-204ENST00000466124 NACADO15069 1562 aa12.3□□□□□ -0.44
PRKCB-204ENST00000466124 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
PRKCB-204ENST00000466124 UNC13AQ9UPW8 1703 aa12.16□□□□□ -0.46
PRKCB-204ENST00000466124 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
PRKCB-204ENST00000466124 PLPPR3Q6T4P5 718 aa12.11□□□□□ -0.47
PRKCB-204ENST00000466124 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
PRKCB-204ENST00000466124 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
PRKCB-204ENST00000466124 SHROOM4Q9ULL8 1493 aa11.97□□□□□ -0.49
PRKCB-204ENST00000466124 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
PRKCB-204ENST00000466124 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
PRKCB-204ENST00000466124 DNAJC5Q9H3Z4 198 aa11.86□□□□□ -0.51
PRKCB-204ENST00000466124 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
PRKCB-204ENST00000466124 FOXD1Q16676 465 aa11.84□□□□□ -0.51
PRKCB-204ENST00000466124 DCAF1Q9Y4B6 1507 aa11.8□□□□□ -0.52
PRKCB-204ENST00000466124 ZCCHC6Q5VYS8 1495 aaKnown RBP11.76□□□□□ -0.53
PRKCB-204ENST00000466124 SCRIBQ14160 1630 aa11.73□□□□□ -0.53
PRKCB-204ENST00000466124 ADRA2BP18089 450 aa11.55□□□□□ -0.56
PRKCB-204ENST00000466124 PPP6R1Q9UPN7 881 aa11.55□□□□□ -0.56
PRKCB-204ENST00000466124 CUX2O14529 1486 aa11.55□□□□□ -0.56
PRKCB-204ENST00000466124 ERCC6Q03468 1493 aa11.42□□□□□ -0.58
PRKCB-204ENST00000466124 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
PRKCB-204ENST00000466124 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
PRKCB-204ENST00000466124 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
PRKCB-204ENST00000466124 NESP48681 1621 aa11.25□□□□□ -0.61
PRKCB-204ENST00000466124 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
PRKCB-204ENST00000466124 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
PRKCB-204ENST00000466124 PIAS4Q8N2W9 510 aaPredicted RBP11.19□□□□□ -0.62
PRKCB-204ENST00000466124 SMARCA4P51532 1647 aa11.19□□□□□ -0.62
PRKCB-204ENST00000466124 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
PRKCB-204ENST00000466124 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
PRKCB-204ENST00000466124 BAZ1BQ9UIG0 1483 aaKnown RBP11.14□□□□□ -0.63
PRKCB-204ENST00000466124 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
PRKCB-204ENST00000466124 KIF21AQ7Z4S6 1674 aa11.1□□□□□ -0.63
PRKCB-204ENST00000466124 PDS5BQ9NTI5 1447 aa11.09□□□□□ -0.63
PRKCB-204ENST00000466124 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-204ENST00000466124 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
PRKCB-204ENST00000466124 WDR62O43379 1518 aa11.02□□□□□ -0.65
PRKCB-204ENST00000466124 CADPSQ9ULU8 1353 aa11□□□□□ -0.65
PRKCB-204ENST00000466124 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
PRKCB-204ENST00000466124 OSCARQ8IYS5 282 aa10.92□□□□□ -0.66
PRKCB-204ENST00000466124 CEP164Q9UPV0 1460 aa10.9□□□□□ -0.66
PRKCB-204ENST00000466124 FANCD2Q9BXW9 1451 aa10.86□□□□□ -0.67
PRKCB-204ENST00000466124 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
PRKCB-204ENST00000466124 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
PRKCB-204ENST00000466124 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
PRKCB-204ENST00000466124 CFTRP13569 1480 aa10.82□□□□□ -0.68
PRKCB-204ENST00000466124 WIZO95785 1651 aa10.81□□□□□ -0.68
PRKCB-204ENST00000466124 URB2Q14146 1524 aaKnown RBP10.8□□□□□ -0.68
PRKCB-204ENST00000466124 MSH5O43196 834 aa10.79□□□□□ -0.68
PRKCB-204ENST00000466124 ARHGEF11O15085 1522 aa10.78□□□□□ -0.68
PRKCB-204ENST00000466124 PPP4R3CPQ6ZMV5 832 aa10.73□□□□□ -0.69
PRKCB-204ENST00000466124 IFT140Q96RY7 1462 aa10.71□□□□□ -0.69
PRKCB-204ENST00000466124 ZNF608Q9ULD9 1512 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-204ENST00000466124 KCNA4P22459 653 aa10.69□□□□□ -0.7
PRKCB-204ENST00000466124 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
PRKCB-204ENST00000466124 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
PRKCB-204ENST00000466124 CYB5RLQ6IPT4 315 aa10.66□□□□□ -0.7
PRKCB-204ENST00000466124 ARAP1Q96P48 1450 aa10.66□□□□□ -0.7
PRKCB-204ENST00000466124 RSF1Q96T23 1441 aaPredicted RBP10.64□□□□□ -0.71
PRKCB-204ENST00000466124 EIF4G3O43432 1585 aaKnown RBP10.64□□□□□ -0.71
PRKCB-204ENST00000466124 TOPBP1Q92547 1522 aa10.63□□□□□ -0.71
PRKCB-204ENST00000466124 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
PRKCB-204ENST00000466124 CHD1O14646 1710 aa10.6□□□□□ -0.71
PRKCB-204ENST00000466124 ABCC8Q09428 1581 aa10.59□□□□□ -0.71
PRKCB-204ENST00000466124 DNMBPQ6XZF7 1577 aa10.57□□□□□ -0.72
PRKCB-204ENST00000466124 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
PRKCB-204ENST00000466124 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.722e-6■■■■■ 27.5
PRKCB-204ENST00000466124 CCDC88BA6NC98 1476 aa10.54□□□□□ -0.72
PRKCB-204ENST00000466124 CLASP1Q7Z460 1538 aa10.51□□□□□ -0.73
PRKCB-204ENST00000466124 POLA1P09884 1462 aaPredicted RBP10.5□□□□□ -0.73
PRKCB-204ENST00000466124 FBLN2P98095 1184 aa10.5□□□□□ -0.73
PRKCB-204ENST00000466124 WDR97A6NE52 1622 aa10.47□□□□□ -0.73
PRKCB-204ENST00000466124 SNAPC4Q5SXM2 1469 aa10.46□□□□□ -0.74
PRKCB-204ENST00000466124 SYNJ1O43426 1573 aa10.45□□□□□ -0.74
PRKCB-204ENST00000466124 SCAF1Q9H7N4 1312 aaKnown RBP10.45□□□□□ -0.74
PRKCB-204ENST00000466124 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
PRKCB-204ENST00000466124 RAD54L2Q9Y4B4 1467 aa10.44□□□□□ -0.74
PRKCB-204ENST00000466124 TDRD9Q8NDG6 1382 aaKnown RBP10.44□□□□□ -0.74
PRKCB-204ENST00000466124 MAGI1Q96QZ7 1491 aaPredicted RBP10.43□□□□□ -0.74
PRKCB-204ENST00000466124 NCBP3Q53F19 620 aaKnown RBP10.43□□□□□ -0.74
PRKCB-204ENST00000466124 SOGA1O94964 1423 aa10.42□□□□□ -0.74
PRKCB-204ENST00000466124 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
PRKCB-204ENST00000466124 SYNJ2O15056 1496 aa10.4□□□□□ -0.74
PRKCB-204ENST00000466124 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
PRKCB-204ENST00000466124 GAPVD1Q14C86 1478 aa10.39□□□□□ -0.75
PRKCB-204ENST00000466124 FGD5Q6ZNL6 1462 aa10.38□□□□□ -0.75
PRKCB-204ENST00000466124 CNKSR2Q8WXI2 1034 aa10.36□□□□□ -0.75
PRKCB-204ENST00000466124 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
PRKCB-204ENST00000466124 CUX1P39880 1505 aa10.33□□□□□ -0.76
PRKCB-204ENST00000466124 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
PRKCB-204ENST00000466124 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms