RNA–Protein interactions for RNA: ENST00000466102.1

NPTX2-202, Transcript of neuronal pentraxin 2, humanhuman

TSL 1 (best)

Gene NPTX2, Length 843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2-202ENST00000466102 NISCHQ9Y2I1 1504 aa42.23■■■■■ 4.35
NPTX2-202ENST00000466102 ABCC9O60706 1549 aa38.42■■■■□ 3.74
NPTX2-202ENST00000466102 CCDC180Q9P1Z9 1646 aa38.06■■■■□ 3.68
NPTX2-202ENST00000466102 RB1CC1Q8TDY2 1594 aa36.31■■■■□ 3.4
NPTX2-202ENST00000466102 DNAJC5BQ9UF47 199 aa36.25■■■■□ 3.39
NPTX2-202ENST00000466102 NACADO15069 1562 aa35.93■■■■□ 3.34
NPTX2-202ENST00000466102 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
NPTX2-202ENST00000466102 DCAF8L2P0C7V8 631 aa35.82■■■■□ 3.32
NPTX2-202ENST00000466102 PABPN1Q86U42 306 aaKnown RBP eCLIP35.69■■■■□ 3.3
NPTX2-202ENST00000466102 BICRAQ9NZM4 1560 aa35.4■■■■□ 3.26
NPTX2-202ENST00000466102 MYO15BQ96JP2 1530 aa35.21■■■■□ 3.23
NPTX2-202ENST00000466102 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
NPTX2-202ENST00000466102 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
NPTX2-202ENST00000466102 DCAF1Q9Y4B6 1507 aa34.72■■■■□ 3.15
NPTX2-202ENST00000466102 CC2D2AQ9P2K1 1620 aa34.69■■■■□ 3.14
NPTX2-202ENST00000466102 SHROOM4Q9ULL8 1493 aa34.56■■■■□ 3.12
NPTX2-202ENST00000466102 CECR2Q9BXF3 1484 aa34.53■■■■□ 3.12
NPTX2-202ENST00000466102 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
NPTX2-202ENST00000466102 DNAJC5Q9H3Z4 198 aa33.29■■■□□ 2.92
NPTX2-202ENST00000466102 NCAPD3P42695 1498 aa33.13■■■□□ 2.89
NPTX2-202ENST00000466102 SMARCA4P51532 1647 aa33.1■■■□□ 2.89
NPTX2-202ENST00000466102 ERCC6Q03468 1493 aa33.1■■■□□ 2.89
NPTX2-202ENST00000466102 ATAD2BQ9ULI0 1458 aa33.09■■■□□ 2.89
NPTX2-202ENST00000466102 CUX2O14529 1486 aa33.01■■■□□ 2.88
NPTX2-202ENST00000466102 NESP48681 1621 aa32.98■■■□□ 2.87
NPTX2-202ENST00000466102 SMARCA2P51531 1590 aa32.95■■■□□ 2.86
NPTX2-202ENST00000466102 HMGXB3Q12766 1538 aa32.94■■■□□ 2.86
NPTX2-202ENST00000466102 BAZ1BQ9UIG0 1483 aaKnown RBP32.78■■■□□ 2.84
NPTX2-202ENST00000466102 BAZ1AQ9NRL2 1556 aaPredicted RBP32.77■■■□□ 2.84
NPTX2-202ENST00000466102 THOC2Q8NI27 1593 aaKnown RBP32.67■■■□□ 2.82
NPTX2-202ENST00000466102 MROH2BQ7Z745 1585 aa32.65■■■□□ 2.82
NPTX2-202ENST00000466102 PEG3Q9GZU2 1588 aa32.64■■■□□ 2.82
NPTX2-202ENST00000466102 KIF21AQ7Z4S6 1674 aa32.63■■■□□ 2.81
NPTX2-202ENST00000466102 LAMC3Q9Y6N6 1575 aa32.51■■■□□ 2.79
NPTX2-202ENST00000466102 WIZO95785 1651 aa32.34■■■□□ 2.77
NPTX2-202ENST00000466102 PDS5BQ9NTI5 1447 aa32.24■■■□□ 2.75
NPTX2-202ENST00000466102 CADPSQ9ULU8 1353 aa32.13■■■□□ 2.73
NPTX2-202ENST00000466102 MRC2Q9UBG0 1479 aa32.1■■■□□ 2.73
NPTX2-202ENST00000466102 WDR62O43379 1518 aa32.05■■■□□ 2.72
NPTX2-202ENST00000466102 CEP164Q9UPV0 1460 aa31.92■■■□□ 2.7
NPTX2-202ENST00000466102 TRIM41Q8WV44 630 aa31.92■■■□□ 2.7
NPTX2-202ENST00000466102 FANCD2Q9BXW9 1451 aa31.86■■■□□ 2.69
NPTX2-202ENST00000466102 RSF1Q96T23 1441 aaPredicted RBP31.76■■■□□ 2.68
NPTX2-202ENST00000466102 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
NPTX2-202ENST00000466102 CFTRP13569 1480 aa31.73■■■□□ 2.67
NPTX2-202ENST00000466102 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.66
NPTX2-202ENST00000466102 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
NPTX2-202ENST00000466102 OSCARQ8IYS5 282 aa31.41■■■□□ 2.62
NPTX2-202ENST00000466102 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
NPTX2-202ENST00000466102 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.61
NPTX2-202ENST00000466102 RIMBP3CA6NJZ7 1639 aa31.32■■■□□ 2.6
NPTX2-202ENST00000466102 RIMBP3BA6NNM3 1639 aa31.32■■■□□ 2.6
NPTX2-202ENST00000466102 RIMBP3Q9UFD9 1639 aa31.32■■■□□ 2.6
NPTX2-202ENST00000466102 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
NPTX2-202ENST00000466102 IFT140Q96RY7 1462 aa31.23■■■□□ 2.59
NPTX2-202ENST00000466102 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
NPTX2-202ENST00000466102 CHD1O14646 1710 aa31.16■■■□□ 2.58
NPTX2-202ENST00000466102 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
NPTX2-202ENST00000466102 ARHGEF11O15085 1522 aa31.1■■■□□ 2.57
NPTX2-202ENST00000466102 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
NPTX2-202ENST00000466102 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.55
NPTX2-202ENST00000466102 ABCC8Q09428 1581 aa30.96■■■□□ 2.55
NPTX2-202ENST00000466102 POLA1P09884 1462 aaPredicted RBP30.92■■■□□ 2.54
NPTX2-202ENST00000466102 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.54
NPTX2-202ENST00000466102 FBLN2P98095 1184 aa30.83■■■□□ 2.53
NPTX2-202ENST00000466102 CYB5RLQ6IPT4 315 aa30.83■■■□□ 2.53
NPTX2-202ENST00000466102 ARAP1Q96P48 1450 aa30.8■■■□□ 2.52
NPTX2-202ENST00000466102 TDRD9Q8NDG6 1382 aaKnown RBP30.76■■■□□ 2.51
NPTX2-202ENST00000466102 FGD5Q6ZNL6 1462 aa30.72■■■□□ 2.51
NPTX2-202ENST00000466102 SOGA1O94964 1423 aa30.71■■■□□ 2.51
NPTX2-202ENST00000466102 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
NPTX2-202ENST00000466102 CUX1P39880 1505 aa30.69■■■□□ 2.5
NPTX2-202ENST00000466102 WDR97A6NE52 1622 aa30.63■■■□□ 2.49
NPTX2-202ENST00000466102 CLASP1Q7Z460 1538 aa30.6■■■□□ 2.49
NPTX2-202ENST00000466102 PBRM1Q86U86 1689 aa30.59■■■□□ 2.49
NPTX2-202ENST00000466102 TRHP20396 242 aaPredicted RBP30.59■■■□□ 2.49
NPTX2-202ENST00000466102 SYNJ1O43426 1573 aa30.51■■■□□ 2.47
NPTX2-202ENST00000466102 MAGI1Q96QZ7 1491 aaPredicted RBP30.47■■■□□ 2.47
NPTX2-202ENST00000466102 GRIN2BQ13224 1484 aa30.46■■■□□ 2.47
NPTX2-202ENST00000466102 CHMP7Q8WUX9 453 aaPredicted RBP30.45■■■□□ 2.47
NPTX2-202ENST00000466102 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
NPTX2-202ENST00000466102 ABCA5Q8WWZ7 1642 aa30.37■■■□□ 2.45
NPTX2-202ENST00000466102 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
NPTX2-202ENST00000466102 ERCC6L2Q5T890 1561 aa30.27■■■□□ 2.44
NPTX2-202ENST00000466102 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
NPTX2-202ENST00000466102 SUPT5HO00267 1087 aaKnown RBP30.25■■■□□ 2.43
NPTX2-202ENST00000466102 ADAMTS12P58397 1594 aa30.18■■■□□ 2.42
NPTX2-202ENST00000466102 CEP170Q5SW79 1584 aa30.15■■■□□ 2.42
NPTX2-202ENST00000466102 BIVM-ERCC5R4GMW8 1640 aa30.13■■■□□ 2.41
NPTX2-202ENST00000466102 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
NPTX2-202ENST00000466102 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
NPTX2-202ENST00000466102 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.4
NPTX2-202ENST00000466102 SHROOM2Q13796 1616 aa29.99■■■□□ 2.39
NPTX2-202ENST00000466102 NUP160Q12769 1436 aa29.98■■■□□ 2.39
NPTX2-202ENST00000466102 FHAD1B1AJZ9 1412 aa29.9■■■□□ 2.38
NPTX2-202ENST00000466102 KIF13AQ9H1H9 1805 aa29.89■■■□□ 2.38
NPTX2-202ENST00000466102 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
NPTX2-202ENST00000466102 AEBP2Q6ZN18 517 aaPredicted RBP29.82■■■□□ 2.36
NPTX2-202ENST00000466102 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.36
NPTX2-202ENST00000466102 PRG4Q92954 1404 aaPredicted RBP29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms