RNA–Protein interactions for RNA: ENST00000466073.5

TFAP2A-208, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-208ENST00000466073 NISCHQ9Y2I1 1504 aa38.72■■■■□ 3.79
TFAP2A-208ENST00000466073 CCDC180Q9P1Z9 1646 aa34.83■■■■□ 3.17
TFAP2A-208ENST00000466073 ABCC9O60706 1549 aa34.54■■■■□ 3.12
TFAP2A-208ENST00000466073 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
TFAP2A-208ENST00000466073 NACADO15069 1562 aa32.83■■■□□ 2.85
TFAP2A-208ENST00000466073 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
TFAP2A-208ENST00000466073 MYO15BQ96JP2 1530 aa32.42■■■□□ 2.78
TFAP2A-208ENST00000466073 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
TFAP2A-208ENST00000466073 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
TFAP2A-208ENST00000466073 DNAJC5BQ9UF47 199 aa32.09■■■□□ 2.73
TFAP2A-208ENST00000466073 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
TFAP2A-208ENST00000466073 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
TFAP2A-208ENST00000466073 BICRAQ9NZM4 1560 aa32■■■□□ 2.71
TFAP2A-208ENST00000466073 SHROOM4Q9ULL8 1493 aa31.73■■■□□ 2.67
TFAP2A-208ENST00000466073 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
TFAP2A-208ENST00000466073 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.59
TFAP2A-208ENST00000466073 EIF4G1Q04637 1599 aaKnown RBP31.24■■■□□ 2.59
TFAP2A-208ENST00000466073 CECR2Q9BXF3 1484 aa31.13■■■□□ 2.57
TFAP2A-208ENST00000466073 SMARCA4P51532 1647 aa30.23■■■□□ 2.43
TFAP2A-208ENST00000466073 NCAPD3P42695 1498 aa30.22■■■□□ 2.43
TFAP2A-208ENST00000466073 SMARCA2P51531 1590 aa30.17■■■□□ 2.42
TFAP2A-208ENST00000466073 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
TFAP2A-208ENST00000466073 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
TFAP2A-208ENST00000466073 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
TFAP2A-208ENST00000466073 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
TFAP2A-208ENST00000466073 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
TFAP2A-208ENST00000466073 ERCC6Q03468 1493 aa29.88■■■□□ 2.37
TFAP2A-208ENST00000466073 MROH2BQ7Z745 1585 aa29.81■■■□□ 2.36
TFAP2A-208ENST00000466073 CUX2O14529 1486 aa29.8■■■□□ 2.36
TFAP2A-208ENST00000466073 NESP48681 1621 aa29.68■■■□□ 2.34
TFAP2A-208ENST00000466073 LAMC3Q9Y6N6 1575 aa29.61■■■□□ 2.33
TFAP2A-208ENST00000466073 THOC2Q8NI27 1593 aaKnown RBP29.49■■■□□ 2.31
TFAP2A-208ENST00000466073 WIZO95785 1651 aa29.47■■■□□ 2.31
TFAP2A-208ENST00000466073 DNAJC5Q9H3Z4 198 aa29.46■■■□□ 2.31
TFAP2A-208ENST00000466073 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
TFAP2A-208ENST00000466073 PDS5BQ9NTI5 1447 aa29.38■■■□□ 2.29
TFAP2A-208ENST00000466073 CADPSQ9ULU8 1353 aa29.29■■■□□ 2.28
TFAP2A-208ENST00000466073 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
TFAP2A-208ENST00000466073 TOP2AP11388 1531 aaKnown RBP29.18■■■□□ 2.26
TFAP2A-208ENST00000466073 MRC2Q9UBG0 1479 aa29.16■■■□□ 2.26
TFAP2A-208ENST00000466073 WDR62O43379 1518 aa29.1■■■□□ 2.25
TFAP2A-208ENST00000466073 CEP164Q9UPV0 1460 aa29.08■■■□□ 2.25
TFAP2A-208ENST00000466073 CFTRP13569 1480 aa29.03■■■□□ 2.24
TFAP2A-208ENST00000466073 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
TFAP2A-208ENST00000466073 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
TFAP2A-208ENST00000466073 URB2Q14146 1524 aaKnown RBP28.75■■■□□ 2.19
TFAP2A-208ENST00000466073 CCDC88BA6NC98 1476 aa28.73■■■□□ 2.19
TFAP2A-208ENST00000466073 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
TFAP2A-208ENST00000466073 IFT140Q96RY7 1462 aa28.47■■■□□ 2.15
TFAP2A-208ENST00000466073 ABCC8Q09428 1581 aa28.45■■■□□ 2.15
TFAP2A-208ENST00000466073 DNMBPQ6XZF7 1577 aa28.44■■■□□ 2.14
TFAP2A-208ENST00000466073 ZNF608Q9ULD9 1512 aaPredicted RBP28.34■■■□□ 2.13
TFAP2A-208ENST00000466073 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
TFAP2A-208ENST00000466073 OSCARQ8IYS5 282 aa28.3■■■□□ 2.12
TFAP2A-208ENST00000466073 TRIM41Q8WV44 630 aa28.24■■■□□ 2.11
TFAP2A-208ENST00000466073 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
TFAP2A-208ENST00000466073 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.1
TFAP2A-208ENST00000466073 CHD1O14646 1710 aa28.07■■■□□ 2.08
TFAP2A-208ENST00000466073 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.08
TFAP2A-208ENST00000466073 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
TFAP2A-208ENST00000466073 RIMBP3CA6NJZ7 1639 aa28.06■■■□□ 2.08
TFAP2A-208ENST00000466073 RIMBP3BA6NNM3 1639 aa28.06■■■□□ 2.08
TFAP2A-208ENST00000466073 RIMBP3Q9UFD9 1639 aa28.06■■■□□ 2.08
TFAP2A-208ENST00000466073 FGD5Q6ZNL6 1462 aa28.04■■■□□ 2.08
TFAP2A-208ENST00000466073 CUX1P39880 1505 aa28.02■■■□□ 2.08
TFAP2A-208ENST00000466073 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
TFAP2A-208ENST00000466073 SOGA1O94964 1423 aa28.01■■■□□ 2.07
TFAP2A-208ENST00000466073 ARHGEF11O15085 1522 aa27.98■■■□□ 2.07
TFAP2A-208ENST00000466073 TDRD9Q8NDG6 1382 aaKnown RBP27.9■■■□□ 2.06
TFAP2A-208ENST00000466073 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
TFAP2A-208ENST00000466073 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.05
TFAP2A-208ENST00000466073 MAGI1Q96QZ7 1491 aaPredicted RBP27.85■■■□□ 2.05
TFAP2A-208ENST00000466073 FBLN2P98095 1184 aa27.83■■■□□ 2.05
TFAP2A-208ENST00000466073 GRIN2BQ13224 1484 aa27.83■■■□□ 2.04
TFAP2A-208ENST00000466073 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
TFAP2A-208ENST00000466073 SYNJ1O43426 1573 aa27.76■■■□□ 2.03
TFAP2A-208ENST00000466073 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
TFAP2A-208ENST00000466073 ABCA10Q8WWZ4 1543 aa27.74■■■□□ 2.03
TFAP2A-208ENST00000466073 CLASP1Q7Z460 1538 aa27.73■■■□□ 2.03
TFAP2A-208ENST00000466073 SYNJ2O15056 1496 aa27.72■■■□□ 2.03
TFAP2A-208ENST00000466073 GAPVD1Q14C86 1478 aa27.72■■■□□ 2.03
TFAP2A-208ENST00000466073 ARAP1Q96P48 1450 aa27.7■■■□□ 2.02
TFAP2A-208ENST00000466073 BIVM-ERCC5R4GMW8 1640 aa27.69■■■□□ 2.02
TFAP2A-208ENST00000466073 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
TFAP2A-208ENST00000466073 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
TFAP2A-208ENST00000466073 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
TFAP2A-208ENST00000466073 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
TFAP2A-208ENST00000466073 ADAMTS12P58397 1594 aa27.54■■■□□ 2
TFAP2A-208ENST00000466073 GRIN2AQ12879 1464 aa27.47■■□□□ 1.99
TFAP2A-208ENST00000466073 ERICH3Q5RHP9 1530 aa27.42■■□□□ 1.98
TFAP2A-208ENST00000466073 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
TFAP2A-208ENST00000466073 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
TFAP2A-208ENST00000466073 NUP160Q12769 1436 aa27.36■■□□□ 1.97
TFAP2A-208ENST00000466073 TRHP20396 242 aaPredicted RBP27.29■■□□□ 1.96
TFAP2A-208ENST00000466073 SHROOM2Q13796 1616 aa27.27■■□□□ 1.96
TFAP2A-208ENST00000466073 ERCC6L2Q5T890 1561 aa27.23■■□□□ 1.95
TFAP2A-208ENST00000466073 RUSC2Q8N2Y8 1516 aa27.16■■□□□ 1.94
TFAP2A-208ENST00000466073 CUL7Q14999 1698 aa27.11■■□□□ 1.93
TFAP2A-208ENST00000466073 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
TFAP2A-208ENST00000466073 PRG4Q92954 1404 aaPredicted RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms