RNA–Protein interactions for RNA: ENST00000465896.5

PHC3-201, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-201ENST00000465896 NISCHQ9Y2I1 1504 aa31.31■■■□□ 2.6
PHC3-201ENST00000465896 ABCC9O60706 1549 aa28.43■■■□□ 2.14
PHC3-201ENST00000465896 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
PHC3-201ENST00000465896 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
PHC3-201ENST00000465896 RB1CC1Q8TDY2 1594 aa26.89■■□□□ 1.9
PHC3-201ENST00000465896 NACADO15069 1562 aa26.67■■□□□ 1.86
PHC3-201ENST00000465896 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
PHC3-201ENST00000465896 PABPN1Q86U42 306 aaKnown RBP eCLIP26.39■■□□□ 1.82
PHC3-201ENST00000465896 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
PHC3-201ENST00000465896 BICRAQ9NZM4 1560 aa26.31■■□□□ 1.8
PHC3-201ENST00000465896 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
PHC3-201ENST00000465896 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
PHC3-201ENST00000465896 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.73
PHC3-201ENST00000465896 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
PHC3-201ENST00000465896 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
PHC3-201ENST00000465896 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
PHC3-201ENST00000465896 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
PHC3-201ENST00000465896 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.69
PHC3-201ENST00000465896 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
PHC3-201ENST00000465896 NCAPD3P42695 1498 aa24.64■■□□□ 1.54
PHC3-201ENST00000465896 ATAD2BQ9ULI0 1458 aa24.56■■□□□ 1.52
PHC3-201ENST00000465896 CUX2O14529 1486 aa24.54■■□□□ 1.52
PHC3-201ENST00000465896 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
PHC3-201ENST00000465896 HMGXB3Q12766 1538 aa24.45■■□□□ 1.51
PHC3-201ENST00000465896 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
PHC3-201ENST00000465896 NESP48681 1621 aa24.42■■□□□ 1.5
PHC3-201ENST00000465896 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
PHC3-201ENST00000465896 PEG3Q9GZU2 1588 aa24.28■■□□□ 1.48
PHC3-201ENST00000465896 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
PHC3-201ENST00000465896 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
PHC3-201ENST00000465896 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
PHC3-201ENST00000465896 MROH2BQ7Z745 1585 aa24.17■■□□□ 1.46
PHC3-201ENST00000465896 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
PHC3-201ENST00000465896 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
PHC3-201ENST00000465896 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
PHC3-201ENST00000465896 WIZO95785 1651 aa23.89■■□□□ 1.41
PHC3-201ENST00000465896 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
PHC3-201ENST00000465896 WDR62O43379 1518 aa23.79■■□□□ 1.4
PHC3-201ENST00000465896 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
PHC3-201ENST00000465896 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
PHC3-201ENST00000465896 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
PHC3-201ENST00000465896 CFTRP13569 1480 aa23.57■■□□□ 1.36
PHC3-201ENST00000465896 TRIM41Q8WV44 630 aa23.55■■□□□ 1.36
PHC3-201ENST00000465896 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
PHC3-201ENST00000465896 URB2Q14146 1524 aaKnown RBP23.5■■□□□ 1.35
PHC3-201ENST00000465896 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
PHC3-201ENST00000465896 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
PHC3-201ENST00000465896 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
PHC3-201ENST00000465896 ZNF608Q9ULD9 1512 aaPredicted RBP23.25■■□□□ 1.31
PHC3-201ENST00000465896 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
PHC3-201ENST00000465896 RIMBP3CA6NJZ7 1639 aa23.2■■□□□ 1.3
PHC3-201ENST00000465896 RIMBP3BA6NNM3 1639 aa23.2■■□□□ 1.3
PHC3-201ENST00000465896 RIMBP3Q9UFD9 1639 aa23.2■■□□□ 1.3
PHC3-201ENST00000465896 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
PHC3-201ENST00000465896 IFT140Q96RY7 1462 aa23.14■■□□□ 1.29
PHC3-201ENST00000465896 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
PHC3-201ENST00000465896 ARHGEF11O15085 1522 aa23.07■■□□□ 1.28
PHC3-201ENST00000465896 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
PHC3-201ENST00000465896 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
PHC3-201ENST00000465896 CHD1O14646 1710 aa23■■□□□ 1.27
PHC3-201ENST00000465896 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.271e-7■■■■■ 32.3
PHC3-201ENST00000465896 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
PHC3-201ENST00000465896 POLA1P09884 1462 aaPredicted RBP22.91■■□□□ 1.26
PHC3-201ENST00000465896 ARAP1Q96P48 1450 aa22.86■■□□□ 1.25
PHC3-201ENST00000465896 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
PHC3-201ENST00000465896 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
PHC3-201ENST00000465896 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
PHC3-201ENST00000465896 CLASP1Q7Z460 1538 aa22.72■■□□□ 1.23
PHC3-201ENST00000465896 SOGA1O94964 1423 aa22.72■■□□□ 1.23
PHC3-201ENST00000465896 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
PHC3-201ENST00000465896 CUX1P39880 1505 aa22.72■■□□□ 1.23
PHC3-201ENST00000465896 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
PHC3-201ENST00000465896 FBLN2P98095 1184 aa22.68■■□□□ 1.22
PHC3-201ENST00000465896 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
PHC3-201ENST00000465896 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
PHC3-201ENST00000465896 PBRM1Q86U86 1689 aa22.56■■□□□ 1.2
PHC3-201ENST00000465896 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
PHC3-201ENST00000465896 GRIN2BQ13224 1484 aa22.55■■□□□ 1.2
PHC3-201ENST00000465896 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
PHC3-201ENST00000465896 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
PHC3-201ENST00000465896 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
PHC3-201ENST00000465896 CHMP7Q8WUX9 453 aaPredicted RBP22.48■■□□□ 1.19
PHC3-201ENST00000465896 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
PHC3-201ENST00000465896 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
PHC3-201ENST00000465896 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
PHC3-201ENST00000465896 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
PHC3-201ENST00000465896 CEP170Q5SW79 1584 aa22.32■■□□□ 1.16
PHC3-201ENST00000465896 GRIN2AQ12879 1464 aa22.31■■□□□ 1.16
PHC3-201ENST00000465896 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
PHC3-201ENST00000465896 NUP160Q12769 1436 aa22.27■■□□□ 1.16
PHC3-201ENST00000465896 SHROOM2Q13796 1616 aa22.26■■□□□ 1.15
PHC3-201ENST00000465896 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
PHC3-201ENST00000465896 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
PHC3-201ENST00000465896 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
PHC3-201ENST00000465896 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.14
PHC3-201ENST00000465896 KIF13AQ9H1H9 1805 aa22.13■■□□□ 1.13
PHC3-201ENST00000465896 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
PHC3-201ENST00000465896 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
PHC3-201ENST00000465896 PRG4Q92954 1404 aaPredicted RBP22.01■■□□□ 1.11
PHC3-201ENST00000465896 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms