RNA–Protein interactions for RNA: ENST00000465882.5

KPNA1-203, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 3

Gene KPNA1, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-203ENST00000465882 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
KPNA1-203ENST00000465882 ABCC9O60706 1549 aa26.34■■□□□ 1.81
KPNA1-203ENST00000465882 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
KPNA1-203ENST00000465882 RB1CC1Q8TDY2 1594 aa25.03■■□□□ 1.6
KPNA1-203ENST00000465882 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
KPNA1-203ENST00000465882 NACADO15069 1562 aa24.83■■□□□ 1.57
KPNA1-203ENST00000465882 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
KPNA1-203ENST00000465882 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
KPNA1-203ENST00000465882 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
KPNA1-203ENST00000465882 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
KPNA1-203ENST00000465882 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
KPNA1-203ENST00000465882 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
KPNA1-203ENST00000465882 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
KPNA1-203ENST00000465882 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
KPNA1-203ENST00000465882 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
KPNA1-203ENST00000465882 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
KPNA1-203ENST00000465882 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
KPNA1-203ENST00000465882 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
KPNA1-203ENST00000465882 DNAJC5Q9H3Z4 198 aa23.1■■□□□ 1.29
KPNA1-203ENST00000465882 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
KPNA1-203ENST00000465882 CUX2O14529 1486 aa22.85■■□□□ 1.25
KPNA1-203ENST00000465882 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
KPNA1-203ENST00000465882 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
KPNA1-203ENST00000465882 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
KPNA1-203ENST00000465882 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
KPNA1-203ENST00000465882 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
KPNA1-203ENST00000465882 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.2
KPNA1-203ENST00000465882 NESP48681 1621 aa22.57■■□□□ 1.2
KPNA1-203ENST00000465882 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
KPNA1-203ENST00000465882 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
KPNA1-203ENST00000465882 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
KPNA1-203ENST00000465882 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
KPNA1-203ENST00000465882 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
KPNA1-203ENST00000465882 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
KPNA1-203ENST00000465882 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
KPNA1-203ENST00000465882 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
KPNA1-203ENST00000465882 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
KPNA1-203ENST00000465882 WIZO95785 1651 aa22.07■■□□□ 1.12
KPNA1-203ENST00000465882 WDR62O43379 1518 aa22.07■■□□□ 1.12
KPNA1-203ENST00000465882 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
KPNA1-203ENST00000465882 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
KPNA1-203ENST00000465882 CFTRP13569 1480 aa21.91■■□□□ 1.1
KPNA1-203ENST00000465882 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
KPNA1-203ENST00000465882 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
KPNA1-203ENST00000465882 TOP2AP11388 1531 aaKnown RBP21.81■■□□□ 1.08
KPNA1-203ENST00000465882 OSCARQ8IYS5 282 aa21.78■■□□□ 1.08
KPNA1-203ENST00000465882 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
KPNA1-203ENST00000465882 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
KPNA1-203ENST00000465882 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
KPNA1-203ENST00000465882 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
KPNA1-203ENST00000465882 ZNF608Q9ULD9 1512 aaPredicted RBP21.51■■□□□ 1.03
KPNA1-203ENST00000465882 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
KPNA1-203ENST00000465882 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
KPNA1-203ENST00000465882 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
KPNA1-203ENST00000465882 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
KPNA1-203ENST00000465882 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
KPNA1-203ENST00000465882 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
KPNA1-203ENST00000465882 ARHGEF11O15085 1522 aa21.39■■□□□ 1.02
KPNA1-203ENST00000465882 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
KPNA1-203ENST00000465882 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
KPNA1-203ENST00000465882 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 16e-7■□□□□ 10.8
KPNA1-203ENST00000465882 CHD1O14646 1710 aa21.26■□□□□ 0.99
KPNA1-203ENST00000465882 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
KPNA1-203ENST00000465882 CYB5RLQ6IPT4 315 aa21.24■□□□□ 0.99
KPNA1-203ENST00000465882 FBLN2P98095 1184 aa21.17■□□□□ 0.98
KPNA1-203ENST00000465882 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
KPNA1-203ENST00000465882 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
KPNA1-203ENST00000465882 SOGA1O94964 1423 aa21.16■□□□□ 0.98
KPNA1-203ENST00000465882 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
KPNA1-203ENST00000465882 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
KPNA1-203ENST00000465882 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
KPNA1-203ENST00000465882 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
KPNA1-203ENST00000465882 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
KPNA1-203ENST00000465882 MAGI1Q96QZ7 1491 aaPredicted RBP21.05■□□□□ 0.96
KPNA1-203ENST00000465882 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
KPNA1-203ENST00000465882 CUX1P39880 1505 aa21.04■□□□□ 0.96
KPNA1-203ENST00000465882 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
KPNA1-203ENST00000465882 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
KPNA1-203ENST00000465882 SYNJ1O43426 1573 aa21.01■□□□□ 0.95
KPNA1-203ENST00000465882 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
KPNA1-203ENST00000465882 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
KPNA1-203ENST00000465882 PBRM1Q86U86 1689 aa20.88■□□□□ 0.93
KPNA1-203ENST00000465882 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
KPNA1-203ENST00000465882 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.93
KPNA1-203ENST00000465882 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
KPNA1-203ENST00000465882 GRIN2AQ12879 1464 aa20.73■□□□□ 0.91
KPNA1-203ENST00000465882 NUP160Q12769 1436 aa20.7■□□□□ 0.9
KPNA1-203ENST00000465882 ADAMTS12P58397 1594 aa20.68■□□□□ 0.9
KPNA1-203ENST00000465882 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
KPNA1-203ENST00000465882 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
KPNA1-203ENST00000465882 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
KPNA1-203ENST00000465882 CEP170Q5SW79 1584 aa20.65■□□□□ 0.9
KPNA1-203ENST00000465882 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
KPNA1-203ENST00000465882 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
KPNA1-203ENST00000465882 SHROOM2Q13796 1616 aa20.62■□□□□ 0.89
KPNA1-203ENST00000465882 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
KPNA1-203ENST00000465882 ERICH3Q5RHP9 1530 aa20.6■□□□□ 0.89
KPNA1-203ENST00000465882 PRG4Q92954 1404 aaPredicted RBP20.49■□□□□ 0.87
KPNA1-203ENST00000465882 JPH4Q96JJ6 628 aa20.47■□□□□ 0.87
KPNA1-203ENST00000465882 KIF13AQ9H1H9 1805 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms