RNA–Protein interactions for RNA: ENST00000465858.1

TFAP2A-207, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-207ENST00000465858 NISCHQ9Y2I1 1504 aa50.4■■■■■ 5.66
TFAP2A-207ENST00000465858 ABCC9O60706 1549 aa45.93■■■■■ 4.94
TFAP2A-207ENST00000465858 CCDC180Q9P1Z9 1646 aa45.44■■■■■ 4.87
TFAP2A-207ENST00000465858 RB1CC1Q8TDY2 1594 aa43.51■■■■■ 4.56
TFAP2A-207ENST00000465858 DNAJC5BQ9UF47 199 aa43.5■■■■■ 4.55
TFAP2A-207ENST00000465858 NACADO15069 1562 aa43.09■■■■■ 4.49
TFAP2A-207ENST00000465858 DCAF8L2P0C7V8 631 aa42.81■■■■■ 4.44
TFAP2A-207ENST00000465858 PABPN1Q86U42 306 aaKnown RBP eCLIP42.69■■■■■ 4.42
TFAP2A-207ENST00000465858 UNC13AQ9UPW8 1703 aa42.48■■■■■ 4.39
TFAP2A-207ENST00000465858 MYO15BQ96JP2 1530 aa42.33■■■■■ 4.37
TFAP2A-207ENST00000465858 BICRAQ9NZM4 1560 aa42.22■■■■■ 4.35
TFAP2A-207ENST00000465858 ZCCHC6Q5VYS8 1495 aaKnown RBP41.66■■■■■ 4.26
TFAP2A-207ENST00000465858 SHROOM4Q9ULL8 1493 aa41.65■■■■■ 4.26
TFAP2A-207ENST00000465858 DCAF1Q9Y4B6 1507 aa41.6■■■■■ 4.25
TFAP2A-207ENST00000465858 CC2D2AQ9P2K1 1620 aa41.45■■■■■ 4.23
TFAP2A-207ENST00000465858 CECR2Q9BXF3 1484 aa41.43■■■■■ 4.22
TFAP2A-207ENST00000465858 SCRIBQ14160 1630 aa41.36■■■■■ 4.21
TFAP2A-207ENST00000465858 EIF4G1Q04637 1599 aaKnown RBP41.24■■■■■ 4.19
TFAP2A-207ENST00000465858 DNAJC5Q9H3Z4 198 aa40.35■■■■■ 4.05
TFAP2A-207ENST00000465858 CUX2O14529 1486 aa39.81■■■■□ 3.96
TFAP2A-207ENST00000465858 NCAPD3P42695 1498 aa39.79■■■■□ 3.96
TFAP2A-207ENST00000465858 ERCC6Q03468 1493 aa39.72■■■■□ 3.95
TFAP2A-207ENST00000465858 ATAD2BQ9ULI0 1458 aa39.58■■■■□ 3.93
TFAP2A-207ENST00000465858 SMARCA2P51531 1590 aa39.47■■■■□ 3.91
TFAP2A-207ENST00000465858 HMGXB3Q12766 1538 aa39.44■■■■□ 3.9
TFAP2A-207ENST00000465858 SMARCA4P51532 1647 aa39.42■■■■□ 3.9
TFAP2A-207ENST00000465858 NESP48681 1621 aa39.29■■■■□ 3.88
TFAP2A-207ENST00000465858 BAZ1BQ9UIG0 1483 aaKnown RBP39.19■■■■□ 3.86
TFAP2A-207ENST00000465858 BAZ1AQ9NRL2 1556 aaPredicted RBP39.16■■■■□ 3.86
TFAP2A-207ENST00000465858 PEG3Q9GZU2 1588 aa39.04■■■■□ 3.84
TFAP2A-207ENST00000465858 THOC2Q8NI27 1593 aaKnown RBP38.99■■■■□ 3.83
TFAP2A-207ENST00000465858 LAMC3Q9Y6N6 1575 aa38.97■■■■□ 3.83
TFAP2A-207ENST00000465858 MROH2BQ7Z745 1585 aa38.82■■■■□ 3.8
TFAP2A-207ENST00000465858 PDS5BQ9NTI5 1447 aa38.79■■■■□ 3.8
TFAP2A-207ENST00000465858 KIF21AQ7Z4S6 1674 aa38.77■■■■□ 3.8
TFAP2A-207ENST00000465858 CADPSQ9ULU8 1353 aa38.57■■■■□ 3.76
TFAP2A-207ENST00000465858 MRC2Q9UBG0 1479 aa38.47■■■■□ 3.75
TFAP2A-207ENST00000465858 TRIM41Q8WV44 630 aa38.39■■■■□ 3.74
TFAP2A-207ENST00000465858 WDR62O43379 1518 aa38.36■■■■□ 3.73
TFAP2A-207ENST00000465858 WIZO95785 1651 aa38.33■■■■□ 3.73
TFAP2A-207ENST00000465858 CEP164Q9UPV0 1460 aa38.22■■■■□ 3.71
TFAP2A-207ENST00000465858 FANCD2Q9BXW9 1451 aa38.12■■■■□ 3.69
TFAP2A-207ENST00000465858 CFTRP13569 1480 aa38.01■■■■□ 3.67
TFAP2A-207ENST00000465858 OSCARQ8IYS5 282 aa37.94■■■■□ 3.66
TFAP2A-207ENST00000465858 RSF1Q96T23 1441 aaPredicted RBP37.85■■■■□ 3.65
TFAP2A-207ENST00000465858 TOP2AP11388 1531 aaKnown RBP37.82■■■■□ 3.65
TFAP2A-207ENST00000465858 URB2Q14146 1524 aaKnown RBP37.82■■■■□ 3.65
TFAP2A-207ENST00000465858 PRDM2Q13029 1718 aa37.58■■■■□ 3.61
TFAP2A-207ENST00000465858 IFT140Q96RY7 1462 aa37.47■■■■□ 3.59
TFAP2A-207ENST00000465858 RIMBP3CA6NJZ7 1639 aa37.44■■■■□ 3.58
TFAP2A-207ENST00000465858 RIMBP3BA6NNM3 1639 aa37.44■■■■□ 3.58
TFAP2A-207ENST00000465858 RIMBP3Q9UFD9 1639 aa37.44■■■■□ 3.58
TFAP2A-207ENST00000465858 ZNF608Q9ULD9 1512 aaPredicted RBP37.43■■■■□ 3.58
TFAP2A-207ENST00000465858 CCDC88BA6NC98 1476 aa37.4■■■■□ 3.58
TFAP2A-207ENST00000465858 TOPBP1Q92547 1522 aa37.34■■■■□ 3.57
TFAP2A-207ENST00000465858 ARHGEF11O15085 1522 aa37.28■■■■□ 3.56
TFAP2A-207ENST00000465858 ABCC8Q09428 1581 aa37.26■■■■□ 3.56
TFAP2A-207ENST00000465858 EIF4G3O43432 1585 aaKnown RBP37.2■■■■□ 3.55
TFAP2A-207ENST00000465858 DNMBPQ6XZF7 1577 aa37.16■■■■□ 3.54
TFAP2A-207ENST00000465858 CYB5RLQ6IPT4 315 aa37.07■■■■□ 3.52
TFAP2A-207ENST00000465858 AQRO60306 1485 aaKnown RBP eCLIP37.05■■■■□ 3.52
TFAP2A-207ENST00000465858 TARBP1Q13395 1621 aaKnown RBP37.02■■■■□ 3.52
TFAP2A-207ENST00000465858 CHD1O14646 1710 aa37.02■■■■□ 3.52
TFAP2A-207ENST00000465858 FBLN2P98095 1184 aa36.95■■■■□ 3.51
TFAP2A-207ENST00000465858 POLA1P09884 1462 aaPredicted RBP36.92■■■■□ 3.5
TFAP2A-207ENST00000465858 ARAP1Q96P48 1450 aa36.88■■■■□ 3.49
TFAP2A-207ENST00000465858 TRHP20396 242 aaPredicted RBP36.84■■■■□ 3.49
TFAP2A-207ENST00000465858 RAD54L2Q9Y4B4 1467 aa36.8■■■■□ 3.48
TFAP2A-207ENST00000465858 SOGA1O94964 1423 aa36.77■■■■□ 3.48
TFAP2A-207ENST00000465858 TDRD9Q8NDG6 1382 aaKnown RBP36.76■■■■□ 3.47
TFAP2A-207ENST00000465858 SNAPC4Q5SXM2 1469 aa36.66■■■■□ 3.46
TFAP2A-207ENST00000465858 WDR97A6NE52 1622 aa36.65■■■■□ 3.46
TFAP2A-207ENST00000465858 FGD5Q6ZNL6 1462 aa36.62■■■■□ 3.45
TFAP2A-207ENST00000465858 CHMP7Q8WUX9 453 aaPredicted RBP36.6■■■■□ 3.45
TFAP2A-207ENST00000465858 CLASP1Q7Z460 1538 aa36.58■■■■□ 3.45
TFAP2A-207ENST00000465858 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
TFAP2A-207ENST00000465858 SYNJ1O43426 1573 aa36.55■■■■□ 3.44
TFAP2A-207ENST00000465858 GRIN2BQ13224 1484 aa36.5■■■■□ 3.43
TFAP2A-207ENST00000465858 CUX1P39880 1505 aa36.5■■■■□ 3.43
TFAP2A-207ENST00000465858 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
TFAP2A-207ENST00000465858 SUPT5HO00267 1087 aaKnown RBP36.43■■■■□ 3.42
TFAP2A-207ENST00000465858 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
TFAP2A-207ENST00000465858 PBRM1Q86U86 1689 aa36.3■■■■□ 3.4
TFAP2A-207ENST00000465858 ABCA10Q8WWZ4 1543 aa36.18■■■■□ 3.38
TFAP2A-207ENST00000465858 ABCA5Q8WWZ7 1642 aa36.16■■■■□ 3.38
TFAP2A-207ENST00000465858 AEBP2Q6ZN18 517 aaPredicted RBP36.15■■■■□ 3.38
TFAP2A-207ENST00000465858 GRIN2AQ12879 1464 aa36.02■■■■□ 3.36
TFAP2A-207ENST00000465858 WRNQ14191 1432 aaPredicted RBP eCLIP35.98■■■■□ 3.35
TFAP2A-207ENST00000465858 ERCC6L2Q5T890 1561 aa35.96■■■■□ 3.35
TFAP2A-207ENST00000465858 ADAMTS12P58397 1594 aa35.93■■■■□ 3.34
TFAP2A-207ENST00000465858 NUP160Q12769 1436 aa35.91■■■■□ 3.34
TFAP2A-207ENST00000465858 CEP170Q5SW79 1584 aa35.89■■■■□ 3.34
TFAP2A-207ENST00000465858 FHAD1B1AJZ9 1412 aa35.83■■■■□ 3.33
TFAP2A-207ENST00000465858 SHROOM2Q13796 1616 aa35.8■■■■□ 3.32
TFAP2A-207ENST00000465858 TOP2BQ02880 1626 aa35.79■■■■□ 3.32
TFAP2A-207ENST00000465858 BIVM-ERCC5R4GMW8 1640 aa35.79■■■■□ 3.32
TFAP2A-207ENST00000465858 ERICH3Q5RHP9 1530 aa35.73■■■■□ 3.31
TFAP2A-207ENST00000465858 PRG4Q92954 1404 aaPredicted RBP35.64■■■■□ 3.3
TFAP2A-207ENST00000465858 KIF13AQ9H1H9 1805 aa35.58■■■■□ 3.29
TFAP2A-207ENST00000465858 JPH4Q96JJ6 628 aa35.58■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms