RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
CSMD2-207ENST00000465819 ABCC9O60706 1549 aa25.96■■□□□ 1.75
CSMD2-207ENST00000465819 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
CSMD2-207ENST00000465819 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
CSMD2-207ENST00000465819 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
CSMD2-207ENST00000465819 NACADO15069 1562 aa24.33■■□□□ 1.49
CSMD2-207ENST00000465819 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
CSMD2-207ENST00000465819 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
CSMD2-207ENST00000465819 UNC13AQ9UPW8 1703 aa24.06■■□□□ 1.44
CSMD2-207ENST00000465819 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.41
CSMD2-207ENST00000465819 BICRAQ9NZM4 1560 aa23.87■■□□□ 1.41
CSMD2-207ENST00000465819 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
CSMD2-207ENST00000465819 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
CSMD2-207ENST00000465819 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
CSMD2-207ENST00000465819 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
CSMD2-207ENST00000465819 CECR2Q9BXF3 1484 aa23.42■■□□□ 1.34
CSMD2-207ENST00000465819 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
CSMD2-207ENST00000465819 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
CSMD2-207ENST00000465819 DNAJC5Q9H3Z4 198 aa22.84■■□□□ 1.25
CSMD2-207ENST00000465819 CUX2O14529 1486 aa22.53■■□□□ 1.2
CSMD2-207ENST00000465819 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
CSMD2-207ENST00000465819 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
CSMD2-207ENST00000465819 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
CSMD2-207ENST00000465819 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
CSMD2-207ENST00000465819 HMGXB3Q12766 1538 aa22.27■■□□□ 1.16
CSMD2-207ENST00000465819 SMARCA4P51532 1647 aa22.25■■□□□ 1.15
CSMD2-207ENST00000465819 NESP48681 1621 aa22.2■■□□□ 1.15
CSMD2-207ENST00000465819 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
CSMD2-207ENST00000465819 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
CSMD2-207ENST00000465819 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.12
CSMD2-207ENST00000465819 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
CSMD2-207ENST00000465819 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
CSMD2-207ENST00000465819 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
CSMD2-207ENST00000465819 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
CSMD2-207ENST00000465819 PDS5BQ9NTI5 1447 aa21.88■■□□□ 1.09
CSMD2-207ENST00000465819 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
CSMD2-207ENST00000465819 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
CSMD2-207ENST00000465819 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
CSMD2-207ENST00000465819 WDR62O43379 1518 aa21.7■■□□□ 1.07
CSMD2-207ENST00000465819 WIZO95785 1651 aa21.63■■□□□ 1.05
CSMD2-207ENST00000465819 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
CSMD2-207ENST00000465819 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.03
CSMD2-207ENST00000465819 CFTRP13569 1480 aa21.44■■□□□ 1.02
CSMD2-207ENST00000465819 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
CSMD2-207ENST00000465819 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
CSMD2-207ENST00000465819 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
CSMD2-207ENST00000465819 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
CSMD2-207ENST00000465819 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
CSMD2-207ENST00000465819 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
CSMD2-207ENST00000465819 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
CSMD2-207ENST00000465819 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
CSMD2-207ENST00000465819 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
CSMD2-207ENST00000465819 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.98
CSMD2-207ENST00000465819 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
CSMD2-207ENST00000465819 TOPBP1Q92547 1522 aa21.08■□□□□ 0.96
CSMD2-207ENST00000465819 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
CSMD2-207ENST00000465819 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
CSMD2-207ENST00000465819 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
CSMD2-207ENST00000465819 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
CSMD2-207ENST00000465819 CHD1O14646 1710 aa20.95■□□□□ 0.94
CSMD2-207ENST00000465819 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
CSMD2-207ENST00000465819 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
CSMD2-207ENST00000465819 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.94
CSMD2-207ENST00000465819 ARAP1Q96P48 1450 aa20.87■□□□□ 0.93
CSMD2-207ENST00000465819 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
CSMD2-207ENST00000465819 FBLN2P98095 1184 aa20.81■□□□□ 0.92
CSMD2-207ENST00000465819 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
CSMD2-207ENST00000465819 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
CSMD2-207ENST00000465819 SOGA1O94964 1423 aa20.72■□□□□ 0.91
CSMD2-207ENST00000465819 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
CSMD2-207ENST00000465819 SNAPC4Q5SXM2 1469 aa20.7■□□□□ 0.9
CSMD2-207ENST00000465819 WDR97A6NE52 1622 aa20.7■□□□□ 0.9
CSMD2-207ENST00000465819 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
CSMD2-207ENST00000465819 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
CSMD2-207ENST00000465819 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
CSMD2-207ENST00000465819 MAGI1Q96QZ7 1491 aaPredicted RBP20.63■□□□□ 0.89
CSMD2-207ENST00000465819 CHMP7Q8WUX9 453 aaPredicted RBP20.61■□□□□ 0.89
CSMD2-207ENST00000465819 CUX1P39880 1505 aa20.59■□□□□ 0.89
CSMD2-207ENST00000465819 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
CSMD2-207ENST00000465819 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
CSMD2-207ENST00000465819 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
CSMD2-207ENST00000465819 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
CSMD2-207ENST00000465819 AEBP2Q6ZN18 517 aaPredicted RBP20.44■□□□□ 0.86
CSMD2-207ENST00000465819 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
CSMD2-207ENST00000465819 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
CSMD2-207ENST00000465819 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
CSMD2-207ENST00000465819 GRIN2AQ12879 1464 aa20.33■□□□□ 0.85
CSMD2-207ENST00000465819 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
CSMD2-207ENST00000465819 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
CSMD2-207ENST00000465819 NUP160Q12769 1436 aa20.27■□□□□ 0.84
CSMD2-207ENST00000465819 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
CSMD2-207ENST00000465819 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
CSMD2-207ENST00000465819 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
CSMD2-207ENST00000465819 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
CSMD2-207ENST00000465819 TOP2BQ02880 1626 aa20.18■□□□□ 0.82
CSMD2-207ENST00000465819 KIF13AQ9H1H9 1805 aa20.16■□□□□ 0.82
CSMD2-207ENST00000465819 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
CSMD2-207ENST00000465819 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
CSMD2-207ENST00000465819 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
CSMD2-207ENST00000465819 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms