RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 NISCHQ9Y2I1 1504 aa49.97■■■■■ 5.59
COL2A1-203ENST00000465743 CCDC180Q9P1Z9 1646 aa44.67■■■■■ 4.74
COL2A1-203ENST00000465743 ABCC9O60706 1549 aa44.19■■■■■ 4.67
COL2A1-203ENST00000465743 RB1CC1Q8TDY2 1594 aa42.22■■■■■ 4.35
COL2A1-203ENST00000465743 NACADO15069 1562 aa42.02■■■■■ 4.32
COL2A1-203ENST00000465743 DCAF8L2P0C7V8 631 aa41.89■■■■■ 4.3
COL2A1-203ENST00000465743 ZCCHC6Q5VYS8 1495 aaKnown RBP41.57■■■■■ 4.25
COL2A1-203ENST00000465743 MYO15BQ96JP2 1530 aa41.55■■■■■ 4.24
COL2A1-203ENST00000465743 UNC13AQ9UPW8 1703 aa41.46■■■■■ 4.23
COL2A1-203ENST00000465743 DCAF1Q9Y4B6 1507 aa41.24■■■■■ 4.19
COL2A1-203ENST00000465743 PABPN1Q86U42 306 aaKnown RBP eCLIP41.18■■■■■ 4.18
COL2A1-203ENST00000465743 BICRAQ9NZM4 1560 aa41.07■■■■■ 4.16
COL2A1-203ENST00000465743 DNAJC5BQ9UF47 199 aa40.96■■■■■ 4.15
COL2A1-203ENST00000465743 SCRIBQ14160 1630 aa40.83■■■■■ 4.13
COL2A1-203ENST00000465743 SHROOM4Q9ULL8 1493 aa40.4■■■■■ 4.06
COL2A1-203ENST00000465743 EIF4G1Q04637 1599 aaKnown RBP39.98■■■■□ 3.99
COL2A1-203ENST00000465743 CC2D2AQ9P2K1 1620 aa39.96■■■■□ 3.99
COL2A1-203ENST00000465743 CECR2Q9BXF3 1484 aa39.71■■■■□ 3.95
COL2A1-203ENST00000465743 SMARCA4P51532 1647 aa38.94■■■■□ 3.82
COL2A1-203ENST00000465743 ATAD2BQ9ULI0 1458 aa38.78■■■■□ 3.8
COL2A1-203ENST00000465743 NCAPD3P42695 1498 aa38.75■■■■□ 3.79
COL2A1-203ENST00000465743 BAZ1AQ9NRL2 1556 aaPredicted RBP38.74■■■■□ 3.79
COL2A1-203ENST00000465743 SMARCA2P51531 1590 aa38.68■■■■□ 3.78
COL2A1-203ENST00000465743 HMGXB3Q12766 1538 aa38.6■■■■□ 3.77
COL2A1-203ENST00000465743 MROH2BQ7Z745 1585 aa38.57■■■■□ 3.77
COL2A1-203ENST00000465743 PEG3Q9GZU2 1588 aa38.49■■■■□ 3.75
COL2A1-203ENST00000465743 BAZ1BQ9UIG0 1483 aaKnown RBP38.45■■■■□ 3.75
COL2A1-203ENST00000465743 WIZO95785 1651 aa38.18■■■■□ 3.7
COL2A1-203ENST00000465743 NESP48681 1621 aa38.15■■■■□ 3.7
COL2A1-203ENST00000465743 ERCC6Q03468 1493 aa38.07■■■■□ 3.68
COL2A1-203ENST00000465743 RSF1Q96T23 1441 aaPredicted RBP37.89■■■■□ 3.66
COL2A1-203ENST00000465743 LAMC3Q9Y6N6 1575 aa37.86■■■■□ 3.65
COL2A1-203ENST00000465743 CUX2O14529 1486 aa37.78■■■■□ 3.64
COL2A1-203ENST00000465743 KIF21AQ7Z4S6 1674 aa37.73■■■■□ 3.63
COL2A1-203ENST00000465743 THOC2Q8NI27 1593 aaKnown RBP37.68■■■■□ 3.62
COL2A1-203ENST00000465743 TOP2AP11388 1531 aaKnown RBP37.67■■■■□ 3.62
COL2A1-203ENST00000465743 CADPSQ9ULU8 1353 aa37.6■■■■□ 3.61
COL2A1-203ENST00000465743 PDS5BQ9NTI5 1447 aa37.54■■■■□ 3.6
COL2A1-203ENST00000465743 CFTRP13569 1480 aa37.32■■■■□ 3.56
COL2A1-203ENST00000465743 MRC2Q9UBG0 1479 aa37.3■■■■□ 3.56
COL2A1-203ENST00000465743 FANCD2Q9BXW9 1451 aa37.25■■■■□ 3.55
COL2A1-203ENST00000465743 CEP164Q9UPV0 1460 aa37.25■■■■□ 3.55
COL2A1-203ENST00000465743 WDR62O43379 1518 aa37.21■■■■□ 3.55
COL2A1-203ENST00000465743 CCDC88BA6NC98 1476 aa37.2■■■■□ 3.55
COL2A1-203ENST00000465743 PRDM2Q13029 1718 aa37.14■■■■□ 3.54
COL2A1-203ENST00000465743 DNAJC5Q9H3Z4 198 aa37.11■■■■□ 3.53
COL2A1-203ENST00000465743 URB2Q14146 1524 aaKnown RBP36.97■■■■□ 3.51
COL2A1-203ENST00000465743 TOPBP1Q92547 1522 aa36.62■■■■□ 3.45
COL2A1-203ENST00000465743 SUPT5HO00267 1087 aaKnown RBP36.58■■■■□ 3.45
COL2A1-203ENST00000465743 DNMBPQ6XZF7 1577 aa36.54■■■■□ 3.44
COL2A1-203ENST00000465743 ZNF608Q9ULD9 1512 aaPredicted RBP36.44■■■■□ 3.42
COL2A1-203ENST00000465743 IFT140Q96RY7 1462 aa36.44■■■■□ 3.42
COL2A1-203ENST00000465743 ABCC8Q09428 1581 aa36.43■■■■□ 3.42
COL2A1-203ENST00000465743 EIF4G3O43432 1585 aaKnown RBP36.31■■■■□ 3.4
COL2A1-203ENST00000465743 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
COL2A1-203ENST00000465743 POLA1P09884 1462 aaPredicted RBP36.29■■■■□ 3.4
COL2A1-203ENST00000465743 CUX1P39880 1505 aa36.23■■■■□ 3.39
COL2A1-203ENST00000465743 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
COL2A1-203ENST00000465743 FGD5Q6ZNL6 1462 aa36.15■■■■□ 3.38
COL2A1-203ENST00000465743 AQRO60306 1485 aaKnown RBP eCLIP36.12■■■■□ 3.37
COL2A1-203ENST00000465743 SOGA1O94964 1423 aa36.04■■■■□ 3.36
COL2A1-203ENST00000465743 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
COL2A1-203ENST00000465743 CHD1O14646 1710 aa35.97■■■■□ 3.35
COL2A1-203ENST00000465743 TDRD9Q8NDG6 1382 aaKnown RBP35.96■■■■□ 3.35
COL2A1-203ENST00000465743 WDR97A6NE52 1622 aa35.95■■■■□ 3.35
COL2A1-203ENST00000465743 TRIM41Q8WV44 630 aa35.82■■■■□ 3.32
COL2A1-203ENST00000465743 SNAPC4Q5SXM2 1469 aa35.81■■■■□ 3.32
COL2A1-203ENST00000465743 SYNJ1O43426 1573 aa35.8■■■■□ 3.32
COL2A1-203ENST00000465743 BIVM-ERCC5R4GMW8 1640 aa35.78■■■■□ 3.32
COL2A1-203ENST00000465743 PBRM1Q86U86 1689 aa35.75■■■■□ 3.31
COL2A1-203ENST00000465743 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
COL2A1-203ENST00000465743 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
COL2A1-203ENST00000465743 TOP2BQ02880 1626 aa35.75■■■■□ 3.31
COL2A1-203ENST00000465743 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
COL2A1-203ENST00000465743 FBLN2P98095 1184 aa35.72■■■■□ 3.31
COL2A1-203ENST00000465743 WRNQ14191 1432 aaPredicted RBP eCLIP35.72■■■■□ 3.31
COL2A1-203ENST00000465743 ABCA10Q8WWZ4 1543 aa35.71■■■■□ 3.31
COL2A1-203ENST00000465743 ABCA5Q8WWZ7 1642 aa35.71■■■■□ 3.31
COL2A1-203ENST00000465743 GRIN2BQ13224 1484 aa35.7■■■■□ 3.31
COL2A1-203ENST00000465743 GAPVD1Q14C86 1478 aa35.66■■■■□ 3.3
COL2A1-203ENST00000465743 MAGI1Q96QZ7 1491 aaPredicted RBP35.66■■■■□ 3.3
COL2A1-203ENST00000465743 ARHGEF11O15085 1522 aa35.64■■■■□ 3.3
COL2A1-203ENST00000465743 SYNJ2O15056 1496 aa35.54■■■■□ 3.28
COL2A1-203ENST00000465743 CLASP1Q7Z460 1538 aa35.49■■■■□ 3.27
COL2A1-203ENST00000465743 CHMP7Q8WUX9 453 aaPredicted RBP35.48■■■■□ 3.27
COL2A1-203ENST00000465743 ADAMTS12P58397 1594 aa35.41■■■■□ 3.26
COL2A1-203ENST00000465743 ARAP1Q96P48 1450 aa35.35■■■■□ 3.25
COL2A1-203ENST00000465743 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
COL2A1-203ENST00000465743 ERICH3Q5RHP9 1530 aa35.27■■■■□ 3.24
COL2A1-203ENST00000465743 CYB5RLQ6IPT4 315 aa35.24■■■■□ 3.23
COL2A1-203ENST00000465743 CEP170Q5SW79 1584 aa35.21■■■■□ 3.23
COL2A1-203ENST00000465743 FHAD1B1AJZ9 1412 aa35.2■■■■□ 3.23
COL2A1-203ENST00000465743 NUP160Q12769 1436 aa35.13■■■■□ 3.21
COL2A1-203ENST00000465743 ERCC6L2Q5T890 1561 aa35.05■■■■□ 3.2
COL2A1-203ENST00000465743 SHROOM2Q13796 1616 aa34.97■■■■□ 3.19
COL2A1-203ENST00000465743 KIF27Q86VH2 1401 aa34.97■■■■□ 3.19
COL2A1-203ENST00000465743 RUSC2Q8N2Y8 1516 aa34.91■■■■□ 3.18
COL2A1-203ENST00000465743 CUL7Q14999 1698 aa34.91■■■■□ 3.18
COL2A1-203ENST00000465743 IGF1RP08069 1367 aa34.88■■■■□ 3.17
COL2A1-203ENST00000465743 PRG4Q92954 1404 aaPredicted RBP34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms