RNA–Protein interactions for RNA: ENST00000465672.1

RETREG2-209, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-209ENST00000465672 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
RETREG2-209ENST00000465672 ABCC9O60706 1549 aa36.08■■■■□ 3.37
RETREG2-209ENST00000465672 CCDC180Q9P1Z9 1646 aa35.46■■■■□ 3.27
RETREG2-209ENST00000465672 DNAJC5BQ9UF47 199 aa34.32■■■■□ 3.08
RETREG2-209ENST00000465672 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
RETREG2-209ENST00000465672 NACADO15069 1562 aa33.65■■■□□ 2.98
RETREG2-209ENST00000465672 DCAF8L2P0C7V8 631 aa33.55■■■□□ 2.96
RETREG2-209ENST00000465672 PABPN1Q86U42 306 aaKnown RBP eCLIP33.53■■■□□ 2.96
RETREG2-209ENST00000465672 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
RETREG2-209ENST00000465672 BICRAQ9NZM4 1560 aa33.08■■■□□ 2.89
RETREG2-209ENST00000465672 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
RETREG2-209ENST00000465672 CC2D2AQ9P2K1 1620 aa32.54■■■□□ 2.8
RETREG2-209ENST00000465672 CECR2Q9BXF3 1484 aa32.52■■■□□ 2.8
RETREG2-209ENST00000465672 SHROOM4Q9ULL8 1493 aa32.47■■■□□ 2.79
RETREG2-209ENST00000465672 ZCCHC6Q5VYS8 1495 aaKnown RBP32.41■■■□□ 2.78
RETREG2-209ENST00000465672 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
RETREG2-209ENST00000465672 DCAF1Q9Y4B6 1507 aa32.33■■■□□ 2.77
RETREG2-209ENST00000465672 EIF4G1Q04637 1599 aaKnown RBP32.31■■■□□ 2.76
RETREG2-209ENST00000465672 DNAJC5Q9H3Z4 198 aa31.87■■■□□ 2.69
RETREG2-209ENST00000465672 CUX2O14529 1486 aa31.23■■■□□ 2.59
RETREG2-209ENST00000465672 ERCC6Q03468 1493 aa31.18■■■□□ 2.58
RETREG2-209ENST00000465672 NCAPD3P42695 1498 aa31.06■■■□□ 2.56
RETREG2-209ENST00000465672 ATAD2BQ9ULI0 1458 aa30.92■■■□□ 2.54
RETREG2-209ENST00000465672 NESP48681 1621 aa30.84■■■□□ 2.53
RETREG2-209ENST00000465672 SMARCA2P51531 1590 aa30.8■■■□□ 2.52
RETREG2-209ENST00000465672 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
RETREG2-209ENST00000465672 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
RETREG2-209ENST00000465672 BAZ1BQ9UIG0 1483 aaKnown RBP30.61■■■□□ 2.49
RETREG2-209ENST00000465672 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
RETREG2-209ENST00000465672 BAZ1AQ9NRL2 1556 aaPredicted RBP30.51■■■□□ 2.47
RETREG2-209ENST00000465672 LAMC3Q9Y6N6 1575 aa30.47■■■□□ 2.47
RETREG2-209ENST00000465672 KIF21AQ7Z4S6 1674 aa30.44■■■□□ 2.46
RETREG2-209ENST00000465672 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
RETREG2-209ENST00000465672 TRIM41Q8WV44 630 aa30.36■■■□□ 2.45
RETREG2-209ENST00000465672 PDS5BQ9NTI5 1447 aa30.31■■■□□ 2.44
RETREG2-209ENST00000465672 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
RETREG2-209ENST00000465672 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
RETREG2-209ENST00000465672 MRC2Q9UBG0 1479 aa30.1■■■□□ 2.41
RETREG2-209ENST00000465672 WDR62O43379 1518 aa30.02■■■□□ 2.4
RETREG2-209ENST00000465672 WIZO95785 1651 aa29.94■■■□□ 2.38
RETREG2-209ENST00000465672 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
RETREG2-209ENST00000465672 FANCD2Q9BXW9 1451 aa29.8■■■□□ 2.36
RETREG2-209ENST00000465672 OSCARQ8IYS5 282 aa29.78■■■□□ 2.36
RETREG2-209ENST00000465672 CFTRP13569 1480 aa29.65■■■□□ 2.34
RETREG2-209ENST00000465672 URB2Q14146 1524 aaKnown RBP29.6■■■□□ 2.33
RETREG2-209ENST00000465672 RIMBP3CA6NJZ7 1639 aa29.46■■■□□ 2.31
RETREG2-209ENST00000465672 RIMBP3BA6NNM3 1639 aa29.46■■■□□ 2.31
RETREG2-209ENST00000465672 RIMBP3Q9UFD9 1639 aa29.46■■■□□ 2.31
RETREG2-209ENST00000465672 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.31
RETREG2-209ENST00000465672 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
RETREG2-209ENST00000465672 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
RETREG2-209ENST00000465672 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
RETREG2-209ENST00000465672 ARHGEF11O15085 1522 aa29.28■■■□□ 2.28
RETREG2-209ENST00000465672 IFT140Q96RY7 1462 aa29.28■■■□□ 2.28
RETREG2-209ENST00000465672 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
RETREG2-209ENST00000465672 CYB5RLQ6IPT4 315 aa29.17■■■□□ 2.26
RETREG2-209ENST00000465672 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
RETREG2-209ENST00000465672 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
RETREG2-209ENST00000465672 CHD1O14646 1710 aa29.08■■■□□ 2.25
RETREG2-209ENST00000465672 TRHP20396 242 aaPredicted RBP29.05■■■□□ 2.24
RETREG2-209ENST00000465672 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
RETREG2-209ENST00000465672 AQRO60306 1485 aaKnown RBP eCLIP29.01■■■□□ 2.236e-9■■■■■ 39
RETREG2-209ENST00000465672 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.23
RETREG2-209ENST00000465672 FBLN2P98095 1184 aa29■■■□□ 2.23
RETREG2-209ENST00000465672 TARBP1Q13395 1621 aaKnown RBP28.95■■■□□ 2.23
RETREG2-209ENST00000465672 ARAP1Q96P48 1450 aa28.95■■■□□ 2.22
RETREG2-209ENST00000465672 POLA1P09884 1462 aaPredicted RBP28.84■■■□□ 2.21
RETREG2-209ENST00000465672 RAD54L2Q9Y4B4 1467 aa28.78■■■□□ 2.2
RETREG2-209ENST00000465672 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
RETREG2-209ENST00000465672 SOGA1O94964 1423 aa28.71■■■□□ 2.19
RETREG2-209ENST00000465672 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
RETREG2-209ENST00000465672 CHMP7Q8WUX9 453 aaPredicted RBP28.64■■■□□ 2.18
RETREG2-209ENST00000465672 CLASP1Q7Z460 1538 aa28.64■■■□□ 2.17
RETREG2-209ENST00000465672 SYNJ1O43426 1573 aa28.6■■■□□ 2.17
RETREG2-209ENST00000465672 AEBP2Q6ZN18 517 aaPredicted RBP28.6■■■□□ 2.17
RETREG2-209ENST00000465672 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
RETREG2-209ENST00000465672 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
RETREG2-209ENST00000465672 MAGI1Q96QZ7 1491 aaPredicted RBP28.54■■■□□ 2.16
RETREG2-209ENST00000465672 GRIN2BQ13224 1484 aa28.5■■■□□ 2.15
RETREG2-209ENST00000465672 CUX1P39880 1505 aa28.48■■■□□ 2.15
RETREG2-209ENST00000465672 SYNJ2O15056 1496 aa28.46■■■□□ 2.15
RETREG2-209ENST00000465672 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
RETREG2-209ENST00000465672 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
RETREG2-209ENST00000465672 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
RETREG2-209ENST00000465672 ERCC6L2Q5T890 1561 aa28.21■■■□□ 2.11
RETREG2-209ENST00000465672 ABCA10Q8WWZ4 1543 aa28.2■■■□□ 2.1
RETREG2-209ENST00000465672 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
RETREG2-209ENST00000465672 CEP170Q5SW79 1584 aa28.1■■■□□ 2.09
RETREG2-209ENST00000465672 ADAMTS12P58397 1594 aa28.06■■■□□ 2.08
RETREG2-209ENST00000465672 NUP160Q12769 1436 aa28.04■■■□□ 2.08
RETREG2-209ENST00000465672 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
RETREG2-209ENST00000465672 SHROOM2Q13796 1616 aa28■■■□□ 2.07
RETREG2-209ENST00000465672 KIF13AQ9H1H9 1805 aa27.99■■■□□ 2.07
RETREG2-209ENST00000465672 FHAD1B1AJZ9 1412 aa27.94■■■□□ 2.06
RETREG2-209ENST00000465672 BIVM-ERCC5R4GMW8 1640 aa27.88■■■□□ 2.05
RETREG2-209ENST00000465672 PRG4Q92954 1404 aaPredicted RBP27.87■■■□□ 2.05
RETREG2-209ENST00000465672 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
RETREG2-209ENST00000465672 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
RETREG2-209ENST00000465672 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
RETREG2-209ENST00000465672 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms