RNA–Protein interactions for RNA: ENST00000465660.1

PLAC9-204, Transcript of placenta specific 9, humanhuman

TSL 2

Gene PLAC9, Length 427 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLAC9-204ENST00000465660 NISCHQ9Y2I1 1504 aa31.53■■■□□ 2.64
PLAC9-204ENST00000465660 ABCC9O60706 1549 aa28.79■■■□□ 2.2
PLAC9-204ENST00000465660 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
PLAC9-204ENST00000465660 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.98
PLAC9-204ENST00000465660 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
PLAC9-204ENST00000465660 NACADO15069 1562 aa27.09■■□□□ 1.93
PLAC9-204ENST00000465660 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
PLAC9-204ENST00000465660 MYO15BQ96JP2 1530 aa26.68■■□□□ 1.86
PLAC9-204ENST00000465660 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
PLAC9-204ENST00000465660 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
PLAC9-204ENST00000465660 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
PLAC9-204ENST00000465660 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
PLAC9-204ENST00000465660 ZCCHC6Q5VYS8 1495 aaKnown RBP26.24■■□□□ 1.79
PLAC9-204ENST00000465660 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
PLAC9-204ENST00000465660 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
PLAC9-204ENST00000465660 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
PLAC9-204ENST00000465660 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
PLAC9-204ENST00000465660 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
PLAC9-204ENST00000465660 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
PLAC9-204ENST00000465660 CUX2O14529 1486 aa25.2■■□□□ 1.62
PLAC9-204ENST00000465660 NCAPD3P42695 1498 aa25.01■■□□□ 1.59
PLAC9-204ENST00000465660 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
PLAC9-204ENST00000465660 ATAD2BQ9ULI0 1458 aa24.81■■□□□ 1.56
PLAC9-204ENST00000465660 HMGXB3Q12766 1538 aa24.8■■□□□ 1.56
PLAC9-204ENST00000465660 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
PLAC9-204ENST00000465660 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
PLAC9-204ENST00000465660 NESP48681 1621 aa24.62■■□□□ 1.53
PLAC9-204ENST00000465660 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
PLAC9-204ENST00000465660 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
PLAC9-204ENST00000465660 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
PLAC9-204ENST00000465660 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
PLAC9-204ENST00000465660 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
PLAC9-204ENST00000465660 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
PLAC9-204ENST00000465660 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
PLAC9-204ENST00000465660 MROH2BQ7Z745 1585 aa24.34■■□□□ 1.49
PLAC9-204ENST00000465660 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
PLAC9-204ENST00000465660 WDR62O43379 1518 aa24.16■■□□□ 1.46
PLAC9-204ENST00000465660 WIZO95785 1651 aa24.15■■□□□ 1.46
PLAC9-204ENST00000465660 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
PLAC9-204ENST00000465660 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
PLAC9-204ENST00000465660 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
PLAC9-204ENST00000465660 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
PLAC9-204ENST00000465660 FANCD2Q9BXW9 1451 aa23.86■■□□□ 1.41
PLAC9-204ENST00000465660 OSCARQ8IYS5 282 aa23.85■■□□□ 1.41
PLAC9-204ENST00000465660 CFTRP13569 1480 aa23.82■■□□□ 1.4
PLAC9-204ENST00000465660 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
PLAC9-204ENST00000465660 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
PLAC9-204ENST00000465660 RIMBP3CA6NJZ7 1639 aa23.64■■□□□ 1.38
PLAC9-204ENST00000465660 RIMBP3BA6NNM3 1639 aa23.64■■□□□ 1.38
PLAC9-204ENST00000465660 RIMBP3Q9UFD9 1639 aa23.64■■□□□ 1.38
PLAC9-204ENST00000465660 PRDM2Q13029 1718 aa23.64■■□□□ 1.37
PLAC9-204ENST00000465660 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
PLAC9-204ENST00000465660 ARHGEF11O15085 1522 aa23.5■■□□□ 1.35
PLAC9-204ENST00000465660 CCDC88BA6NC98 1476 aa23.48■■□□□ 1.35
PLAC9-204ENST00000465660 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
PLAC9-204ENST00000465660 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
PLAC9-204ENST00000465660 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
PLAC9-204ENST00000465660 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
PLAC9-204ENST00000465660 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
PLAC9-204ENST00000465660 CHD1O14646 1710 aa23.28■■□□□ 1.32
PLAC9-204ENST00000465660 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
PLAC9-204ENST00000465660 CYB5RLQ6IPT4 315 aa23.24■■□□□ 1.31
PLAC9-204ENST00000465660 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
PLAC9-204ENST00000465660 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
PLAC9-204ENST00000465660 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.3
PLAC9-204ENST00000465660 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
PLAC9-204ENST00000465660 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
PLAC9-204ENST00000465660 TRHP20396 242 aaPredicted RBP23.08■■□□□ 1.29
PLAC9-204ENST00000465660 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
PLAC9-204ENST00000465660 FBLN2P98095 1184 aa22.98■■□□□ 1.27
PLAC9-204ENST00000465660 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
PLAC9-204ENST00000465660 MAGI1Q96QZ7 1491 aaPredicted RBP22.94■■□□□ 1.26
PLAC9-204ENST00000465660 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
PLAC9-204ENST00000465660 SOGA1O94964 1423 aa22.94■■□□□ 1.26
PLAC9-204ENST00000465660 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
PLAC9-204ENST00000465660 TDRD9Q8NDG6 1382 aaKnown RBP22.9■■□□□ 1.26
PLAC9-204ENST00000465660 CUX1P39880 1505 aa22.86■■□□□ 1.25
PLAC9-204ENST00000465660 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
PLAC9-204ENST00000465660 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
PLAC9-204ENST00000465660 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
PLAC9-204ENST00000465660 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
PLAC9-204ENST00000465660 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
PLAC9-204ENST00000465660 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
PLAC9-204ENST00000465660 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
PLAC9-204ENST00000465660 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
PLAC9-204ENST00000465660 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
PLAC9-204ENST00000465660 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.22
PLAC9-204ENST00000465660 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
PLAC9-204ENST00000465660 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
PLAC9-204ENST00000465660 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
PLAC9-204ENST00000465660 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
PLAC9-204ENST00000465660 NUP160Q12769 1436 aa22.54■■□□□ 1.2
PLAC9-204ENST00000465660 ERCC6L2Q5T890 1561 aa22.54■■□□□ 1.2
PLAC9-204ENST00000465660 CEP170Q5SW79 1584 aa22.52■■□□□ 1.2
PLAC9-204ENST00000465660 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
PLAC9-204ENST00000465660 KIF13AQ9H1H9 1805 aa22.49■■□□□ 1.19
PLAC9-204ENST00000465660 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
PLAC9-204ENST00000465660 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
PLAC9-204ENST00000465660 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
PLAC9-204ENST00000465660 MAPKBP1O60336 1514 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms