RNA–Protein interactions for RNA: ENST00000465653.1

ERCC6-205, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 733 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-205ENST00000465653 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
ERCC6-205ENST00000465653 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
ERCC6-205ENST00000465653 ABCC9O60706 1549 aa29.52■■■□□ 2.32
ERCC6-205ENST00000465653 RB1CC1Q8TDY2 1594 aa28.09■■■□□ 2.09
ERCC6-205ENST00000465653 NACADO15069 1562 aa27.87■■■□□ 2.05
ERCC6-205ENST00000465653 DNAJC5BQ9UF47 199 aa27.66■■■□□ 2.02
ERCC6-205ENST00000465653 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
ERCC6-205ENST00000465653 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
ERCC6-205ENST00000465653 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
ERCC6-205ENST00000465653 PABPN1Q86U42 306 aaKnown RBP eCLIP27.42■■□□□ 1.98
ERCC6-205ENST00000465653 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
ERCC6-205ENST00000465653 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
ERCC6-205ENST00000465653 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
ERCC6-205ENST00000465653 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
ERCC6-205ENST00000465653 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
ERCC6-205ENST00000465653 CC2D2AQ9P2K1 1620 aa26.69■■□□□ 1.86
ERCC6-205ENST00000465653 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
ERCC6-205ENST00000465653 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
ERCC6-205ENST00000465653 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
ERCC6-205ENST00000465653 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
ERCC6-205ENST00000465653 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.69
ERCC6-205ENST00000465653 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
ERCC6-205ENST00000465653 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
ERCC6-205ENST00000465653 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
ERCC6-205ENST00000465653 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
ERCC6-205ENST00000465653 CUX2O14529 1486 aa25.45■■□□□ 1.66
ERCC6-205ENST00000465653 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
ERCC6-205ENST00000465653 DNAJC5Q9H3Z4 198 aa25.4■■□□□ 1.66
ERCC6-205ENST00000465653 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.65
ERCC6-205ENST00000465653 NESP48681 1621 aa25.36■■□□□ 1.65
ERCC6-205ENST00000465653 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
ERCC6-205ENST00000465653 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
ERCC6-205ENST00000465653 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
ERCC6-205ENST00000465653 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
ERCC6-205ENST00000465653 WIZO95785 1651 aa25.03■■□□□ 1.6
ERCC6-205ENST00000465653 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
ERCC6-205ENST00000465653 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
ERCC6-205ENST00000465653 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
ERCC6-205ENST00000465653 WDR62O43379 1518 aa24.78■■□□□ 1.56
ERCC6-205ENST00000465653 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
ERCC6-205ENST00000465653 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.55
ERCC6-205ENST00000465653 TOP2AP11388 1531 aaKnown RBP24.7■■□□□ 1.54
ERCC6-205ENST00000465653 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
ERCC6-205ENST00000465653 CFTRP13569 1480 aa24.64■■□□□ 1.54
ERCC6-205ENST00000465653 PRDM2Q13029 1718 aa24.5■■□□□ 1.51
ERCC6-205ENST00000465653 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
ERCC6-205ENST00000465653 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
ERCC6-205ENST00000465653 TRIM41Q8WV44 630 aa24.31■■□□□ 1.48
ERCC6-205ENST00000465653 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
ERCC6-205ENST00000465653 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
ERCC6-205ENST00000465653 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
ERCC6-205ENST00000465653 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
ERCC6-205ENST00000465653 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
ERCC6-205ENST00000465653 EIF4G3O43432 1585 aaKnown RBP24.11■■□□□ 1.45
ERCC6-205ENST00000465653 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
ERCC6-205ENST00000465653 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
ERCC6-205ENST00000465653 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
ERCC6-205ENST00000465653 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
ERCC6-205ENST00000465653 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
ERCC6-205ENST00000465653 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
ERCC6-205ENST00000465653 CHD1O14646 1710 aa23.94■■□□□ 1.42
ERCC6-205ENST00000465653 AQRO60306 1485 aaKnown RBP eCLIP23.93■■□□□ 1.42
ERCC6-205ENST00000465653 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
ERCC6-205ENST00000465653 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
ERCC6-205ENST00000465653 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
ERCC6-205ENST00000465653 SOGA1O94964 1423 aa23.79■■□□□ 1.4
ERCC6-205ENST00000465653 CUX1P39880 1505 aa23.79■■□□□ 1.4
ERCC6-205ENST00000465653 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
ERCC6-205ENST00000465653 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
ERCC6-205ENST00000465653 FBLN2P98095 1184 aa23.73■■□□□ 1.39
ERCC6-205ENST00000465653 SNAPC4Q5SXM2 1469 aa23.72■■□□□ 1.39
ERCC6-205ENST00000465653 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
ERCC6-205ENST00000465653 CYB5RLQ6IPT4 315 aa23.65■■□□□ 1.38
ERCC6-205ENST00000465653 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
ERCC6-205ENST00000465653 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
ERCC6-205ENST00000465653 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
ERCC6-205ENST00000465653 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
ERCC6-205ENST00000465653 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
ERCC6-205ENST00000465653 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
ERCC6-205ENST00000465653 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
ERCC6-205ENST00000465653 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
ERCC6-205ENST00000465653 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
ERCC6-205ENST00000465653 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
ERCC6-205ENST00000465653 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
ERCC6-205ENST00000465653 BIVM-ERCC5R4GMW8 1640 aa23.42■■□□□ 1.34
ERCC6-205ENST00000465653 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
ERCC6-205ENST00000465653 TOP2BQ02880 1626 aa23.4■■□□□ 1.34
ERCC6-205ENST00000465653 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
ERCC6-205ENST00000465653 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
ERCC6-205ENST00000465653 GRIN2AQ12879 1464 aa23.34■■□□□ 1.33
ERCC6-205ENST00000465653 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
ERCC6-205ENST00000465653 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
ERCC6-205ENST00000465653 NUP160Q12769 1436 aa23.25■■□□□ 1.31
ERCC6-205ENST00000465653 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
ERCC6-205ENST00000465653 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
ERCC6-205ENST00000465653 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
ERCC6-205ENST00000465653 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
ERCC6-205ENST00000465653 PRG4Q92954 1404 aaPredicted RBP23.01■■□□□ 1.27
ERCC6-205ENST00000465653 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
ERCC6-205ENST00000465653 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms