RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, humanhuman

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-208ENST00000465634 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.22
TRIM5-208ENST00000465634 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
TRIM5-208ENST00000465634 ABCC9O60706 1549 aa19.2■□□□□ 0.66
TRIM5-208ENST00000465634 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
TRIM5-208ENST00000465634 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
TRIM5-208ENST00000465634 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
TRIM5-208ENST00000465634 MYO15BQ96JP2 1530 aa18.82■□□□□ 0.6
TRIM5-208ENST00000465634 NACADO15069 1562 aa18.76■□□□□ 0.59
TRIM5-208ENST00000465634 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
TRIM5-208ENST00000465634 SCRIBQ14160 1630 aa18.22■□□□□ 0.51
TRIM5-208ENST00000465634 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
TRIM5-208ENST00000465634 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
TRIM5-208ENST00000465634 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
TRIM5-208ENST00000465634 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRIM5-208ENST00000465634 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
TRIM5-208ENST00000465634 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
TRIM5-208ENST00000465634 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
TRIM5-208ENST00000465634 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
TRIM5-208ENST00000465634 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
TRIM5-208ENST00000465634 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
TRIM5-208ENST00000465634 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
TRIM5-208ENST00000465634 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
TRIM5-208ENST00000465634 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
TRIM5-208ENST00000465634 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
TRIM5-208ENST00000465634 NCAPD3P42695 1498 aa17.33■□□□□ 0.37
TRIM5-208ENST00000465634 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
TRIM5-208ENST00000465634 WIZO95785 1651 aa17.26■□□□□ 0.35
TRIM5-208ENST00000465634 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
TRIM5-208ENST00000465634 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
TRIM5-208ENST00000465634 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
TRIM5-208ENST00000465634 TOP2AP11388 1531 aaKnown RBP17.15■□□□□ 0.34
TRIM5-208ENST00000465634 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
TRIM5-208ENST00000465634 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
TRIM5-208ENST00000465634 CFTRP13569 1480 aa16.8■□□□□ 0.28
TRIM5-208ENST00000465634 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
TRIM5-208ENST00000465634 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
TRIM5-208ENST00000465634 NESP48681 1621 aa16.7■□□□□ 0.26
TRIM5-208ENST00000465634 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
TRIM5-208ENST00000465634 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
TRIM5-208ENST00000465634 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
TRIM5-208ENST00000465634 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
TRIM5-208ENST00000465634 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
TRIM5-208ENST00000465634 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
TRIM5-208ENST00000465634 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
TRIM5-208ENST00000465634 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
TRIM5-208ENST00000465634 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
TRIM5-208ENST00000465634 WDR62O43379 1518 aa16.39■□□□□ 0.21
TRIM5-208ENST00000465634 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
TRIM5-208ENST00000465634 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
TRIM5-208ENST00000465634 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
TRIM5-208ENST00000465634 CUX1P39880 1505 aa16.36■□□□□ 0.21
TRIM5-208ENST00000465634 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.2
TRIM5-208ENST00000465634 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
TRIM5-208ENST00000465634 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
TRIM5-208ENST00000465634 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
TRIM5-208ENST00000465634 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
TRIM5-208ENST00000465634 CUX2O14529 1486 aa16.29■□□□□ 0.2
TRIM5-208ENST00000465634 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
TRIM5-208ENST00000465634 FGD5Q6ZNL6 1462 aa16.26■□□□□ 0.19
TRIM5-208ENST00000465634 SOGA1O94964 1423 aa16.24■□□□□ 0.19
TRIM5-208ENST00000465634 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
TRIM5-208ENST00000465634 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
TRIM5-208ENST00000465634 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
TRIM5-208ENST00000465634 TARBP1Q13395 1621 aaKnown RBP16.15■□□□□ 0.18
TRIM5-208ENST00000465634 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
TRIM5-208ENST00000465634 KIF27Q86VH2 1401 aa16.09■□□□□ 0.17
TRIM5-208ENST00000465634 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
TRIM5-208ENST00000465634 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
TRIM5-208ENST00000465634 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
TRIM5-208ENST00000465634 EEA1Q15075 1411 aa16.04■□□□□ 0.16
TRIM5-208ENST00000465634 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.161e-6■■■■■ 28.7
TRIM5-208ENST00000465634 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
TRIM5-208ENST00000465634 GRIN2BQ13224 1484 aa16■□□□□ 0.15
TRIM5-208ENST00000465634 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
TRIM5-208ENST00000465634 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
TRIM5-208ENST00000465634 IGF1RP08069 1367 aa15.98■□□□□ 0.15
TRIM5-208ENST00000465634 RUSC2Q8N2Y8 1516 aa15.96■□□□□ 0.15
TRIM5-208ENST00000465634 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
TRIM5-208ENST00000465634 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
TRIM5-208ENST00000465634 FHAD1B1AJZ9 1412 aa15.89■□□□□ 0.13
TRIM5-208ENST00000465634 FAM9AQ8IZU1 332 aaPredicted RBP15.89■□□□□ 0.13
TRIM5-208ENST00000465634 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
TRIM5-208ENST00000465634 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
TRIM5-208ENST00000465634 SNAPC4Q5SXM2 1469 aa15.88■□□□□ 0.13
TRIM5-208ENST00000465634 CUL7Q14999 1698 aa15.86■□□□□ 0.13
TRIM5-208ENST00000465634 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
TRIM5-208ENST00000465634 PRXQ9BXM0 1461 aa15.85■□□□□ 0.13
TRIM5-208ENST00000465634 CHMP7Q8WUX9 453 aaPredicted RBP15.85■□□□□ 0.13
TRIM5-208ENST00000465634 RAPGEF2Q9Y4G8 1499 aa15.82■□□□□ 0.12
TRIM5-208ENST00000465634 ADAMTS12P58397 1594 aa15.82■□□□□ 0.12
TRIM5-208ENST00000465634 FBLN2P98095 1184 aa15.79■□□□□ 0.12
TRIM5-208ENST00000465634 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
TRIM5-208ENST00000465634 KIF21BO75037 1637 aa15.76■□□□□ 0.11
TRIM5-208ENST00000465634 GOLGA3Q08378 1498 aa15.72■□□□□ 0.11
TRIM5-208ENST00000465634 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
TRIM5-208ENST00000465634 NUP160Q12769 1436 aa15.7■□□□□ 0.1
TRIM5-208ENST00000465634 UBTFP17480 764 aaKnown RBP15.68■□□□□ 0.1
TRIM5-208ENST00000465634 CHD1O14646 1710 aa15.68■□□□□ 0.1
TRIM5-208ENST00000465634 KIAA0586Q9BVV6 1533 aa15.66■□□□□ 0.1
TRIM5-208ENST00000465634 TNIKQ9UKE5 1360 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms