RNA–Protein interactions for RNA: ENST00000465580.3

SLC23A3-209, Transcript of solute carrier family 23 member 3, humanhuman

TSL 4

Gene SLC23A3, Length 510 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC23A3-209ENST00000465580 NISCHQ9Y2I1 1504 aa38.27■■■■□ 3.72
SLC23A3-209ENST00000465580 ABCC9O60706 1549 aa34.55■■■■□ 3.12
SLC23A3-209ENST00000465580 CCDC180Q9P1Z9 1646 aa34.22■■■■□ 3.07
SLC23A3-209ENST00000465580 RB1CC1Q8TDY2 1594 aa32.67■■■□□ 2.82
SLC23A3-209ENST00000465580 DNAJC5BQ9UF47 199 aa32.59■■■□□ 2.81
SLC23A3-209ENST00000465580 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
SLC23A3-209ENST00000465580 NACADO15069 1562 aa32.43■■■□□ 2.78
SLC23A3-209ENST00000465580 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
SLC23A3-209ENST00000465580 UNC13AQ9UPW8 1703 aa31.95■■■□□ 2.71
SLC23A3-209ENST00000465580 MYO15BQ96JP2 1530 aa31.91■■■□□ 2.7
SLC23A3-209ENST00000465580 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
SLC23A3-209ENST00000465580 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
SLC23A3-209ENST00000465580 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
SLC23A3-209ENST00000465580 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
SLC23A3-209ENST00000465580 SHROOM4Q9ULL8 1493 aa31.2■■■□□ 2.58
SLC23A3-209ENST00000465580 CC2D2AQ9P2K1 1620 aa31.12■■■□□ 2.57
SLC23A3-209ENST00000465580 CECR2Q9BXF3 1484 aa31.07■■■□□ 2.56
SLC23A3-209ENST00000465580 EIF4G1Q04637 1599 aaKnown RBP31.02■■■□□ 2.56
SLC23A3-209ENST00000465580 NCAPD3P42695 1498 aa30■■■□□ 2.39
SLC23A3-209ENST00000465580 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
SLC23A3-209ENST00000465580 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
SLC23A3-209ENST00000465580 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
SLC23A3-209ENST00000465580 SMARCA2P51531 1590 aa29.76■■■□□ 2.35
SLC23A3-209ENST00000465580 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
SLC23A3-209ENST00000465580 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
SLC23A3-209ENST00000465580 NESP48681 1621 aa29.68■■■□□ 2.34
SLC23A3-209ENST00000465580 CUX2O14529 1486 aa29.66■■■□□ 2.34
SLC23A3-209ENST00000465580 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
SLC23A3-209ENST00000465580 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
SLC23A3-209ENST00000465580 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
SLC23A3-209ENST00000465580 PEG3Q9GZU2 1588 aa29.5■■■□□ 2.31
SLC23A3-209ENST00000465580 LAMC3Q9Y6N6 1575 aa29.27■■■□□ 2.28
SLC23A3-209ENST00000465580 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.28
SLC23A3-209ENST00000465580 WIZO95785 1651 aa29.17■■■□□ 2.26
SLC23A3-209ENST00000465580 KIF21AQ7Z4S6 1674 aa29.16■■■□□ 2.26
SLC23A3-209ENST00000465580 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
SLC23A3-209ENST00000465580 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
SLC23A3-209ENST00000465580 MRC2Q9UBG0 1479 aa28.93■■■□□ 2.22
SLC23A3-209ENST00000465580 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
SLC23A3-209ENST00000465580 WDR62O43379 1518 aa28.84■■■□□ 2.21
SLC23A3-209ENST00000465580 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
SLC23A3-209ENST00000465580 CEP164Q9UPV0 1460 aa28.79■■■□□ 2.2
SLC23A3-209ENST00000465580 CFTRP13569 1480 aa28.76■■■□□ 2.19
SLC23A3-209ENST00000465580 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
SLC23A3-209ENST00000465580 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
SLC23A3-209ENST00000465580 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
SLC23A3-209ENST00000465580 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
SLC23A3-209ENST00000465580 OSCARQ8IYS5 282 aa28.39■■■□□ 2.14
SLC23A3-209ENST00000465580 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
SLC23A3-209ENST00000465580 ZNF608Q9ULD9 1512 aaPredicted RBP28.29■■■□□ 2.12
SLC23A3-209ENST00000465580 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
SLC23A3-209ENST00000465580 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
SLC23A3-209ENST00000465580 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
SLC23A3-209ENST00000465580 ABCC8Q09428 1581 aa28.05■■■□□ 2.08
SLC23A3-209ENST00000465580 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.08
SLC23A3-209ENST00000465580 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
SLC23A3-209ENST00000465580 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
SLC23A3-209ENST00000465580 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
SLC23A3-209ENST00000465580 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
SLC23A3-209ENST00000465580 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
SLC23A3-209ENST00000465580 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.07
SLC23A3-209ENST00000465580 RAD54L2Q9Y4B4 1467 aa27.93■■■□□ 2.06
SLC23A3-209ENST00000465580 ARHGEF11O15085 1522 aa27.91■■■□□ 2.06
SLC23A3-209ENST00000465580 FBLN2P98095 1184 aa27.88■■■□□ 2.05
SLC23A3-209ENST00000465580 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
SLC23A3-209ENST00000465580 SOGA1O94964 1423 aa27.84■■■□□ 2.05
SLC23A3-209ENST00000465580 CHD1O14646 1710 aa27.81■■■□□ 2.04
SLC23A3-209ENST00000465580 CYB5RLQ6IPT4 315 aa27.8■■■□□ 2.04
SLC23A3-209ENST00000465580 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
SLC23A3-209ENST00000465580 CUX1P39880 1505 aa27.76■■■□□ 2.03
SLC23A3-209ENST00000465580 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.02
SLC23A3-209ENST00000465580 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
SLC23A3-209ENST00000465580 ARAP1Q96P48 1450 aa27.67■■■□□ 2.02
SLC23A3-209ENST00000465580 CHMP7Q8WUX9 453 aaPredicted RBP27.61■■■□□ 2.01
SLC23A3-209ENST00000465580 GRIN2BQ13224 1484 aa27.56■■■□□ 2
SLC23A3-209ENST00000465580 MAGI1Q96QZ7 1491 aaPredicted RBP27.53■■■□□ 2
SLC23A3-209ENST00000465580 WDR97A6NE52 1622 aa27.52■■■□□ 2
SLC23A3-209ENST00000465580 CLASP1Q7Z460 1538 aa27.51■■■□□ 2
SLC23A3-209ENST00000465580 TRHP20396 242 aaPredicted RBP27.5■■□□□ 1.99
SLC23A3-209ENST00000465580 GAPVD1Q14C86 1478 aa27.47■■□□□ 1.99
SLC23A3-209ENST00000465580 SYNJ2O15056 1496 aa27.46■■□□□ 1.99
SLC23A3-209ENST00000465580 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
SLC23A3-209ENST00000465580 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
SLC23A3-209ENST00000465580 PBRM1Q86U86 1689 aa27.39■■□□□ 1.97
SLC23A3-209ENST00000465580 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
SLC23A3-209ENST00000465580 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
SLC23A3-209ENST00000465580 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
SLC23A3-209ENST00000465580 TOP2BQ02880 1626 aa27.21■■□□□ 1.95
SLC23A3-209ENST00000465580 ERCC6L2Q5T890 1561 aa27.2■■□□□ 1.94
SLC23A3-209ENST00000465580 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
SLC23A3-209ENST00000465580 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
SLC23A3-209ENST00000465580 CEP170Q5SW79 1584 aa27.15■■□□□ 1.94
SLC23A3-209ENST00000465580 NUP160Q12769 1436 aa27.13■■□□□ 1.93
SLC23A3-209ENST00000465580 FHAD1B1AJZ9 1412 aa27.11■■□□□ 1.93
SLC23A3-209ENST00000465580 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
SLC23A3-209ENST00000465580 SHROOM2Q13796 1616 aa26.96■■□□□ 1.91
SLC23A3-209ENST00000465580 JPH4Q96JJ6 628 aa26.92■■□□□ 1.9
SLC23A3-209ENST00000465580 PRG4Q92954 1404 aaPredicted RBP26.91■■□□□ 1.9
SLC23A3-209ENST00000465580 IGF1RP08069 1367 aa26.79■■□□□ 1.88
SLC23A3-209ENST00000465580 RUSC2Q8N2Y8 1516 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms