RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
CTNNB1-211ENST00000465552 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
CTNNB1-211ENST00000465552 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
CTNNB1-211ENST00000465552 CCDC180Q9P1Z9 1646 aa21.74■■□□□ 1.07
CTNNB1-211ENST00000465552 ABCC9O60706 1549 aa21.21■□□□□ 0.99
CTNNB1-211ENST00000465552 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
CTNNB1-211ENST00000465552 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
CTNNB1-211ENST00000465552 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
CTNNB1-211ENST00000465552 NACADO15069 1562 aa20.3■□□□□ 0.84
CTNNB1-211ENST00000465552 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
CTNNB1-211ENST00000465552 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
CTNNB1-211ENST00000465552 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
CTNNB1-211ENST00000465552 MYO15BQ96JP2 1530 aa20.08■□□□□ 0.81
CTNNB1-211ENST00000465552 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
CTNNB1-211ENST00000465552 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
CTNNB1-211ENST00000465552 BICRAQ9NZM4 1560 aa19.8■□□□□ 0.76
CTNNB1-211ENST00000465552 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
CTNNB1-211ENST00000465552 FOXD1Q16676 465 aa19.6■□□□□ 0.73
CTNNB1-211ENST00000465552 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
CTNNB1-211ENST00000465552 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
CTNNB1-211ENST00000465552 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.67
CTNNB1-211ENST00000465552 CC2D2AQ9P2K1 1620 aa19.24■□□□□ 0.67
CTNNB1-211ENST00000465552 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
CTNNB1-211ENST00000465552 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
CTNNB1-211ENST00000465552 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
CTNNB1-211ENST00000465552 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
CTNNB1-211ENST00000465552 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
CTNNB1-211ENST00000465552 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
CTNNB1-211ENST00000465552 WIZO95785 1651 aa18.67■□□□□ 0.58
CTNNB1-211ENST00000465552 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
CTNNB1-211ENST00000465552 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
CTNNB1-211ENST00000465552 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
CTNNB1-211ENST00000465552 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
CTNNB1-211ENST00000465552 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
CTNNB1-211ENST00000465552 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
CTNNB1-211ENST00000465552 MSH5O43196 834 aa18.4■□□□□ 0.54
CTNNB1-211ENST00000465552 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
CTNNB1-211ENST00000465552 NESP48681 1621 aa18.37■□□□□ 0.53
CTNNB1-211ENST00000465552 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
CTNNB1-211ENST00000465552 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
CTNNB1-211ENST00000465552 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
CTNNB1-211ENST00000465552 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
CTNNB1-211ENST00000465552 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
CTNNB1-211ENST00000465552 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
CTNNB1-211ENST00000465552 ADRA2BP18089 450 aa18.18■□□□□ 0.5
CTNNB1-211ENST00000465552 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
CTNNB1-211ENST00000465552 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
CTNNB1-211ENST00000465552 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
CTNNB1-211ENST00000465552 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
CTNNB1-211ENST00000465552 CFTRP13569 1480 aa18.03■□□□□ 0.48
CTNNB1-211ENST00000465552 CUX2O14529 1486 aa18.01■□□□□ 0.47
CTNNB1-211ENST00000465552 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
CTNNB1-211ENST00000465552 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
CTNNB1-211ENST00000465552 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
CTNNB1-211ENST00000465552 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
CTNNB1-211ENST00000465552 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
CTNNB1-211ENST00000465552 WDR62O43379 1518 aa17.93■□□□□ 0.46
CTNNB1-211ENST00000465552 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
CTNNB1-211ENST00000465552 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
CTNNB1-211ENST00000465552 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
CTNNB1-211ENST00000465552 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
CTNNB1-211ENST00000465552 CUX1P39880 1505 aa17.61■□□□□ 0.41
CTNNB1-211ENST00000465552 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
CTNNB1-211ENST00000465552 EIF4G3O43432 1585 aaKnown RBP17.59■□□□□ 0.41
CTNNB1-211ENST00000465552 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
CTNNB1-211ENST00000465552 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
CTNNB1-211ENST00000465552 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
CTNNB1-211ENST00000465552 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
CTNNB1-211ENST00000465552 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
CTNNB1-211ENST00000465552 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
CTNNB1-211ENST00000465552 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
CTNNB1-211ENST00000465552 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
CTNNB1-211ENST00000465552 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
CTNNB1-211ENST00000465552 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
CTNNB1-211ENST00000465552 CHD1O14646 1710 aa17.47■□□□□ 0.39
CTNNB1-211ENST00000465552 SOGA1O94964 1423 aa17.42■□□□□ 0.38
CTNNB1-211ENST00000465552 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
CTNNB1-211ENST00000465552 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.383e-12■■■■■ 38.5
CTNNB1-211ENST00000465552 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
CTNNB1-211ENST00000465552 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
CTNNB1-211ENST00000465552 TDRD9Q8NDG6 1382 aaKnown RBP17.34■□□□□ 0.37
CTNNB1-211ENST00000465552 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
CTNNB1-211ENST00000465552 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
CTNNB1-211ENST00000465552 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
CTNNB1-211ENST00000465552 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
CTNNB1-211ENST00000465552 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
CTNNB1-211ENST00000465552 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
CTNNB1-211ENST00000465552 FBLN2P98095 1184 aa17.19■□□□□ 0.34
CTNNB1-211ENST00000465552 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
CTNNB1-211ENST00000465552 RIMBP3CA6NJZ7 1639 aa17.15■□□□□ 0.34
CTNNB1-211ENST00000465552 RIMBP3BA6NNM3 1639 aa17.15■□□□□ 0.34
CTNNB1-211ENST00000465552 RIMBP3Q9UFD9 1639 aa17.15■□□□□ 0.34
CTNNB1-211ENST00000465552 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
CTNNB1-211ENST00000465552 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
CTNNB1-211ENST00000465552 CLASP1Q7Z460 1538 aa17.1■□□□□ 0.33
CTNNB1-211ENST00000465552 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
CTNNB1-211ENST00000465552 CUL7Q14999 1698 aa17.07■□□□□ 0.32
CTNNB1-211ENST00000465552 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
CTNNB1-211ENST00000465552 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
CTNNB1-211ENST00000465552 GRIN2AQ12879 1464 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms