RNA–Protein interactions for RNA: ENST00000465538.5

LCLAT1-205, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 5

Gene LCLAT1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-205ENST00000465538 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
LCLAT1-205ENST00000465538 ABCC9O60706 1549 aa16.18■□□□□ 0.18
LCLAT1-205ENST00000465538 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
LCLAT1-205ENST00000465538 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
LCLAT1-205ENST00000465538 CCDC180Q9P1Z9 1646 aa15.28■□□□□ 0.04
LCLAT1-205ENST00000465538 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
LCLAT1-205ENST00000465538 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
LCLAT1-205ENST00000465538 UNC13AQ9UPW8 1703 aa14.74□□□□□ -0.05
LCLAT1-205ENST00000465538 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
LCLAT1-205ENST00000465538 NACADO15069 1562 aa14.67□□□□□ -0.06
LCLAT1-205ENST00000465538 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
LCLAT1-205ENST00000465538 CC2D2AQ9P2K1 1620 aa14.61□□□□□ -0.07
LCLAT1-205ENST00000465538 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
LCLAT1-205ENST00000465538 CUX2O14529 1486 aa14.39□□□□□ -0.11
LCLAT1-205ENST00000465538 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
LCLAT1-205ENST00000465538 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
LCLAT1-205ENST00000465538 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
LCLAT1-205ENST00000465538 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.13
LCLAT1-205ENST00000465538 MYO15BQ96JP2 1530 aa14.17□□□□□ -0.14
LCLAT1-205ENST00000465538 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
LCLAT1-205ENST00000465538 ERCC6Q03468 1493 aa14.01□□□□□ -0.17
LCLAT1-205ENST00000465538 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
LCLAT1-205ENST00000465538 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.21
LCLAT1-205ENST00000465538 NESP48681 1621 aa13.63□□□□□ -0.23
LCLAT1-205ENST00000465538 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
LCLAT1-205ENST00000465538 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
LCLAT1-205ENST00000465538 NCAPD3P42695 1498 aa13.56□□□□□ -0.24
LCLAT1-205ENST00000465538 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
LCLAT1-205ENST00000465538 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
LCLAT1-205ENST00000465538 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
LCLAT1-205ENST00000465538 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
LCLAT1-205ENST00000465538 SMARCA2P51531 1590 aa13.46□□□□□ -0.25
LCLAT1-205ENST00000465538 KIF21AQ7Z4S6 1674 aa13.46□□□□□ -0.26
LCLAT1-205ENST00000465538 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
LCLAT1-205ENST00000465538 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
LCLAT1-205ENST00000465538 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
LCLAT1-205ENST00000465538 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
LCLAT1-205ENST00000465538 ATAD2BQ9ULI0 1458 aa13.35□□□□□ -0.27
LCLAT1-205ENST00000465538 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
LCLAT1-205ENST00000465538 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
LCLAT1-205ENST00000465538 PDS5BQ9NTI5 1447 aa13.33□□□□□ -0.28
LCLAT1-205ENST00000465538 WDR62O43379 1518 aa13.29□□□□□ -0.28
LCLAT1-205ENST00000465538 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
LCLAT1-205ENST00000465538 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.29
LCLAT1-205ENST00000465538 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
LCLAT1-205ENST00000465538 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-205ENST00000465538 SMARCA4P51532 1647 aa13.08□□□□□ -0.32
LCLAT1-205ENST00000465538 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
LCLAT1-205ENST00000465538 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
LCLAT1-205ENST00000465538 CEP164Q9UPV0 1460 aa13□□□□□ -0.33
LCLAT1-205ENST00000465538 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
LCLAT1-205ENST00000465538 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
LCLAT1-205ENST00000465538 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
LCLAT1-205ENST00000465538 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
LCLAT1-205ENST00000465538 CHD1O14646 1710 aa12.88□□□□□ -0.35
LCLAT1-205ENST00000465538 KDM4FA0A1W2PPD8 638 aa12.84□□□□□ -0.35
LCLAT1-205ENST00000465538 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
LCLAT1-205ENST00000465538 EIF4G3O43432 1585 aaKnown RBP12.75□□□□□ -0.37
LCLAT1-205ENST00000465538 FBXO41Q8TF61 875 aa12.74□□□□□ -0.37
LCLAT1-205ENST00000465538 CFTRP13569 1480 aa12.72□□□□□ -0.37
LCLAT1-205ENST00000465538 ERCC6L2Q5T890 1561 aa12.72□□□□□ -0.37
LCLAT1-205ENST00000465538 FBLN2P98095 1184 aa12.7□□□□□ -0.38
LCLAT1-205ENST00000465538 CLASP1Q7Z460 1538 aa12.7□□□□□ -0.38
LCLAT1-205ENST00000465538 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
LCLAT1-205ENST00000465538 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
LCLAT1-205ENST00000465538 LMTK3Q96Q04 1460 aa12.68□□□□□ -0.38
LCLAT1-205ENST00000465538 SOCS7O14512 581 aa12.66□□□□□ -0.38
LCLAT1-205ENST00000465538 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.39
LCLAT1-205ENST00000465538 HECW2Q9P2P5 1572 aa12.62□□□□□ -0.39
LCLAT1-205ENST00000465538 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
LCLAT1-205ENST00000465538 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
LCLAT1-205ENST00000465538 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
LCLAT1-205ENST00000465538 PRDM2Q13029 1718 aa12.57□□□□□ -0.4
LCLAT1-205ENST00000465538 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
LCLAT1-205ENST00000465538 ILDR2Q71H61 639 aa12.55□□□□□ -0.4
LCLAT1-205ENST00000465538 WIZO95785 1651 aa12.5□□□□□ -0.41
LCLAT1-205ENST00000465538 KDM6BO15054 1643 aa12.48□□□□□ -0.41
LCLAT1-205ENST00000465538 ABCC8Q09428 1581 aa12.48□□□□□ -0.41
LCLAT1-205ENST00000465538 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
LCLAT1-205ENST00000465538 SYNJ2O15056 1496 aa12.46□□□□□ -0.42
LCLAT1-205ENST00000465538 ADGRL1O94910 1474 aa12.46□□□□□ -0.42
LCLAT1-205ENST00000465538 SENP3Q9H4L4 574 aaPredicted RBP12.45□□□□□ -0.42
LCLAT1-205ENST00000465538 SNAPC4Q5SXM2 1469 aa12.44□□□□□ -0.42
LCLAT1-205ENST00000465538 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
LCLAT1-205ENST00000465538 ABCC10Q5T3U5 1492 aa12.41□□□□□ -0.42
LCLAT1-205ENST00000465538 FAM69CQ0P6D2 419 aa12.41□□□□□ -0.42
LCLAT1-205ENST00000465538 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.42
LCLAT1-205ENST00000465538 TDRD9Q8NDG6 1382 aaKnown RBP12.39□□□□□ -0.43
LCLAT1-205ENST00000465538 DISP3Q9P2K9 1392 aa12.38□□□□□ -0.43
LCLAT1-205ENST00000465538 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
LCLAT1-205ENST00000465538 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
LCLAT1-205ENST00000465538 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
LCLAT1-205ENST00000465538 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
LCLAT1-205ENST00000465538 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
LCLAT1-205ENST00000465538 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
LCLAT1-205ENST00000465538 MAPKBP1O60336 1514 aa12.3□□□□□ -0.44
LCLAT1-205ENST00000465538 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
LCLAT1-205ENST00000465538 GRIN2BQ13224 1484 aa12.29□□□□□ -0.44
LCLAT1-205ENST00000465538 SOGA1O94964 1423 aa12.28□□□□□ -0.44
LCLAT1-205ENST00000465538 SHROOM2Q13796 1616 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms