RNA–Protein interactions for RNA: ENST00000465530.1

CDNF-203, Transcript of cerebral dopamine neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best)

Gene CDNF, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDNF-203ENST00000465530 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
CDNF-203ENST00000465530 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
CDNF-203ENST00000465530 ABCC9O60706 1549 aa36.85■■■■□ 3.49
CDNF-203ENST00000465530 RB1CC1Q8TDY2 1594 aa35.11■■■■□ 3.21
CDNF-203ENST00000465530 NACADO15069 1562 aa34.89■■■■□ 3.18
CDNF-203ENST00000465530 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
CDNF-203ENST00000465530 UNC13AQ9UPW8 1703 aa34.5■■■■□ 3.11
CDNF-203ENST00000465530 MYO15BQ96JP2 1530 aa34.46■■■■□ 3.11
CDNF-203ENST00000465530 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
CDNF-203ENST00000465530 PABPN1Q86U42 306 aaKnown RBP eCLIP34.25■■■■□ 3.07
CDNF-203ENST00000465530 BICRAQ9NZM4 1560 aa34.21■■■■□ 3.07
CDNF-203ENST00000465530 ZCCHC6Q5VYS8 1495 aaKnown RBP34.15■■■■□ 3.06
CDNF-203ENST00000465530 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
CDNF-203ENST00000465530 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
CDNF-203ENST00000465530 SCRIBQ14160 1630 aa33.64■■■□□ 2.98
CDNF-203ENST00000465530 CC2D2AQ9P2K1 1620 aa33.36■■■□□ 2.93
CDNF-203ENST00000465530 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
CDNF-203ENST00000465530 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
CDNF-203ENST00000465530 NCAPD3P42695 1498 aa32.21■■■□□ 2.75
CDNF-203ENST00000465530 SMARCA4P51532 1647 aa32.13■■■□□ 2.73
CDNF-203ENST00000465530 ATAD2BQ9ULI0 1458 aa32.12■■■□□ 2.73
CDNF-203ENST00000465530 HMGXB3Q12766 1538 aa32.01■■■□□ 2.72
CDNF-203ENST00000465530 SMARCA2P51531 1590 aa32.01■■■□□ 2.71
CDNF-203ENST00000465530 BAZ1AQ9NRL2 1556 aaPredicted RBP31.93■■■□□ 2.7
CDNF-203ENST00000465530 PEG3Q9GZU2 1588 aa31.86■■■□□ 2.69
CDNF-203ENST00000465530 CUX2O14529 1486 aa31.77■■■□□ 2.68
CDNF-203ENST00000465530 BAZ1BQ9UIG0 1483 aaKnown RBP31.76■■■□□ 2.67
CDNF-203ENST00000465530 ERCC6Q03468 1493 aa31.74■■■□□ 2.67
CDNF-203ENST00000465530 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
CDNF-203ENST00000465530 NESP48681 1621 aa31.72■■■□□ 2.67
CDNF-203ENST00000465530 DNAJC5Q9H3Z4 198 aa31.68■■■□□ 2.66
CDNF-203ENST00000465530 LAMC3Q9Y6N6 1575 aa31.5■■■□□ 2.63
CDNF-203ENST00000465530 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
CDNF-203ENST00000465530 WIZO95785 1651 aa31.37■■■□□ 2.61
CDNF-203ENST00000465530 KIF21AQ7Z4S6 1674 aa31.37■■■□□ 2.61
CDNF-203ENST00000465530 PDS5BQ9NTI5 1447 aa31.21■■■□□ 2.59
CDNF-203ENST00000465530 CADPSQ9ULU8 1353 aa31.18■■■□□ 2.58
CDNF-203ENST00000465530 RSF1Q96T23 1441 aaPredicted RBP31.05■■■□□ 2.56
CDNF-203ENST00000465530 MRC2Q9UBG0 1479 aa31.01■■■□□ 2.55
CDNF-203ENST00000465530 WDR62O43379 1518 aa30.99■■■□□ 2.55
CDNF-203ENST00000465530 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
CDNF-203ENST00000465530 CFTRP13569 1480 aa30.89■■■□□ 2.53
CDNF-203ENST00000465530 CEP164Q9UPV0 1460 aa30.87■■■□□ 2.53
CDNF-203ENST00000465530 FANCD2Q9BXW9 1451 aa30.85■■■□□ 2.53
CDNF-203ENST00000465530 PRDM2Q13029 1718 aa30.69■■■□□ 2.5
CDNF-203ENST00000465530 URB2Q14146 1524 aaKnown RBP30.66■■■□□ 2.5
CDNF-203ENST00000465530 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
CDNF-203ENST00000465530 TOPBP1Q92547 1522 aa30.3■■■□□ 2.44
CDNF-203ENST00000465530 ZNF608Q9ULD9 1512 aaPredicted RBP30.26■■■□□ 2.43
CDNF-203ENST00000465530 IFT140Q96RY7 1462 aa30.25■■■□□ 2.43
CDNF-203ENST00000465530 OSCARQ8IYS5 282 aa30.2■■■□□ 2.43
CDNF-203ENST00000465530 TRIM41Q8WV44 630 aa30.2■■■□□ 2.43
CDNF-203ENST00000465530 DNMBPQ6XZF7 1577 aa30.2■■■□□ 2.42
CDNF-203ENST00000465530 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
CDNF-203ENST00000465530 EIF4G3O43432 1585 aaKnown RBP30.12■■■□□ 2.41
CDNF-203ENST00000465530 TARBP1Q13395 1621 aaKnown RBP30.1■■■□□ 2.41
CDNF-203ENST00000465530 POLA1P09884 1462 aaPredicted RBP29.99■■■□□ 2.39
CDNF-203ENST00000465530 RIMBP3CA6NJZ7 1639 aa29.98■■■□□ 2.39
CDNF-203ENST00000465530 RIMBP3BA6NNM3 1639 aa29.98■■■□□ 2.39
CDNF-203ENST00000465530 RIMBP3Q9UFD9 1639 aa29.98■■■□□ 2.39
CDNF-203ENST00000465530 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.38
CDNF-203ENST00000465530 CHD1O14646 1710 aa29.92■■■□□ 2.38
CDNF-203ENST00000465530 RAD54L2Q9Y4B4 1467 aa29.87■■■□□ 2.37
CDNF-203ENST00000465530 ARHGEF11O15085 1522 aa29.86■■■□□ 2.37
CDNF-203ENST00000465530 CUX1P39880 1505 aa29.81■■■□□ 2.36
CDNF-203ENST00000465530 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
CDNF-203ENST00000465530 SOGA1O94964 1423 aa29.78■■■□□ 2.36
CDNF-203ENST00000465530 WDR97A6NE52 1622 aa29.74■■■□□ 2.35
CDNF-203ENST00000465530 TDRD9Q8NDG6 1382 aaKnown RBP29.72■■■□□ 2.35
CDNF-203ENST00000465530 SNAPC4Q5SXM2 1469 aa29.65■■■□□ 2.34
CDNF-203ENST00000465530 ARAP1Q96P48 1450 aa29.59■■■□□ 2.33
CDNF-203ENST00000465530 CLASP1Q7Z460 1538 aa29.57■■■□□ 2.32
CDNF-203ENST00000465530 MAGI1Q96QZ7 1491 aaPredicted RBP29.57■■■□□ 2.32
CDNF-203ENST00000465530 FBLN2P98095 1184 aa29.57■■■□□ 2.32
CDNF-203ENST00000465530 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
CDNF-203ENST00000465530 PBRM1Q86U86 1689 aa29.54■■■□□ 2.32
CDNF-203ENST00000465530 SUPT5HO00267 1087 aaKnown RBP29.5■■■□□ 2.31
CDNF-203ENST00000465530 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
CDNF-203ENST00000465530 CYB5RLQ6IPT4 315 aa29.49■■■□□ 2.31
CDNF-203ENST00000465530 ABCA10Q8WWZ4 1543 aa29.47■■■□□ 2.31
CDNF-203ENST00000465530 SYNJ2O15056 1496 aa29.46■■■□□ 2.31
CDNF-203ENST00000465530 SYNJ1O43426 1573 aa29.46■■■□□ 2.31
CDNF-203ENST00000465530 GAPVD1Q14C86 1478 aa29.44■■■□□ 2.3
CDNF-203ENST00000465530 CHMP7Q8WUX9 453 aaPredicted RBP29.39■■■□□ 2.3
CDNF-203ENST00000465530 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
CDNF-203ENST00000465530 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
CDNF-203ENST00000465530 WRNQ14191 1432 aaPredicted RBP eCLIP29.27■■■□□ 2.28
CDNF-203ENST00000465530 ADAMTS12P58397 1594 aa29.24■■■□□ 2.27
CDNF-203ENST00000465530 GRIN2AQ12879 1464 aa29.2■■■□□ 2.26
CDNF-203ENST00000465530 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
CDNF-203ENST00000465530 NUP160Q12769 1436 aa29.12■■■□□ 2.25
CDNF-203ENST00000465530 ERCC6L2Q5T890 1561 aa29.12■■■□□ 2.25
CDNF-203ENST00000465530 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
CDNF-203ENST00000465530 TRHP20396 242 aaPredicted RBP29.09■■■□□ 2.25
CDNF-203ENST00000465530 SHROOM2Q13796 1616 aa29.06■■■□□ 2.24
CDNF-203ENST00000465530 FHAD1B1AJZ9 1412 aa29.06■■■□□ 2.24
CDNF-203ENST00000465530 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
CDNF-203ENST00000465530 PRG4Q92954 1404 aaPredicted RBP28.77■■■□□ 2.2
CDNF-203ENST00000465530 JPH4Q96JJ6 628 aa28.7■■■□□ 2.18
CDNF-203ENST00000465530 IGF1RP08069 1367 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms