RNA–Protein interactions for RNA: ENST00000465426.5

PDE6B-205, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 450 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-205ENST00000465426 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
PDE6B-205ENST00000465426 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
PDE6B-205ENST00000465426 ABCC9O60706 1549 aa27.38■■□□□ 1.97
PDE6B-205ENST00000465426 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
PDE6B-205ENST00000465426 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
PDE6B-205ENST00000465426 NACADO15069 1562 aa25.95■■□□□ 1.75
PDE6B-205ENST00000465426 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
PDE6B-205ENST00000465426 ZCCHC6Q5VYS8 1495 aaKnown RBP25.62■■□□□ 1.69
PDE6B-205ENST00000465426 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
PDE6B-205ENST00000465426 PABPN1Q86U42 306 aaKnown RBP eCLIP25.55■■□□□ 1.68
PDE6B-205ENST00000465426 DNAJC5BQ9UF47 199 aa25.42■■□□□ 1.66
PDE6B-205ENST00000465426 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
PDE6B-205ENST00000465426 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
PDE6B-205ENST00000465426 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
PDE6B-205ENST00000465426 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
PDE6B-205ENST00000465426 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
PDE6B-205ENST00000465426 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
PDE6B-205ENST00000465426 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
PDE6B-205ENST00000465426 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
PDE6B-205ENST00000465426 ATAD2BQ9ULI0 1458 aa23.95■■□□□ 1.42
PDE6B-205ENST00000465426 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
PDE6B-205ENST00000465426 BAZ1AQ9NRL2 1556 aaPredicted RBP23.92■■□□□ 1.42
PDE6B-205ENST00000465426 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
PDE6B-205ENST00000465426 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
PDE6B-205ENST00000465426 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
PDE6B-205ENST00000465426 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
PDE6B-205ENST00000465426 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
PDE6B-205ENST00000465426 NESP48681 1621 aa23.62■■□□□ 1.37
PDE6B-205ENST00000465426 WIZO95785 1651 aa23.61■■□□□ 1.37
PDE6B-205ENST00000465426 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
PDE6B-205ENST00000465426 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
PDE6B-205ENST00000465426 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
PDE6B-205ENST00000465426 CUX2O14529 1486 aa23.36■■□□□ 1.33
PDE6B-205ENST00000465426 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
PDE6B-205ENST00000465426 THOC2Q8NI27 1593 aaKnown RBP23.28■■□□□ 1.32
PDE6B-205ENST00000465426 CADPSQ9ULU8 1353 aa23.25■■□□□ 1.31
PDE6B-205ENST00000465426 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
PDE6B-205ENST00000465426 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
PDE6B-205ENST00000465426 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
PDE6B-205ENST00000465426 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
PDE6B-205ENST00000465426 CFTRP13569 1480 aa23.04■■□□□ 1.28
PDE6B-205ENST00000465426 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
PDE6B-205ENST00000465426 CEP164Q9UPV0 1460 aa23.03■■□□□ 1.28
PDE6B-205ENST00000465426 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
PDE6B-205ENST00000465426 WDR62O43379 1518 aa22.98■■□□□ 1.27
PDE6B-205ENST00000465426 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
PDE6B-205ENST00000465426 URB2Q14146 1524 aaKnown RBP22.84■■□□□ 1.25
PDE6B-205ENST00000465426 SUPT5HO00267 1087 aaKnown RBP22.67■■□□□ 1.22
PDE6B-205ENST00000465426 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
PDE6B-205ENST00000465426 DNMBPQ6XZF7 1577 aa22.57■■□□□ 1.2
PDE6B-205ENST00000465426 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
PDE6B-205ENST00000465426 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
PDE6B-205ENST00000465426 ABCC8Q09428 1581 aa22.51■■□□□ 1.19
PDE6B-205ENST00000465426 EIF4G3O43432 1585 aaKnown RBP22.43■■□□□ 1.18
PDE6B-205ENST00000465426 TARBP1Q13395 1621 aaKnown RBP22.42■■□□□ 1.18
PDE6B-205ENST00000465426 POLA1P09884 1462 aaPredicted RBP22.41■■□□□ 1.18
PDE6B-205ENST00000465426 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
PDE6B-205ENST00000465426 OSCARQ8IYS5 282 aa22.37■■□□□ 1.17
PDE6B-205ENST00000465426 CUX1P39880 1505 aa22.36■■□□□ 1.17
PDE6B-205ENST00000465426 AQRO60306 1485 aaKnown RBP eCLIP22.36■■□□□ 1.17
PDE6B-205ENST00000465426 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
PDE6B-205ENST00000465426 SOGA1O94964 1423 aa22.31■■□□□ 1.16
PDE6B-205ENST00000465426 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
PDE6B-205ENST00000465426 CHD1O14646 1710 aa22.28■■□□□ 1.16
PDE6B-205ENST00000465426 TDRD9Q8NDG6 1382 aaKnown RBP22.26■■□□□ 1.15
PDE6B-205ENST00000465426 FBLN2P98095 1184 aa22.19■■□□□ 1.14
PDE6B-205ENST00000465426 WDR97A6NE52 1622 aa22.19■■□□□ 1.14
PDE6B-205ENST00000465426 RIMBP3CA6NJZ7 1639 aa22.14■■□□□ 1.14
PDE6B-205ENST00000465426 RIMBP3BA6NNM3 1639 aa22.14■■□□□ 1.14
PDE6B-205ENST00000465426 RIMBP3Q9UFD9 1639 aa22.14■■□□□ 1.14
PDE6B-205ENST00000465426 SNAPC4Q5SXM2 1469 aa22.14■■□□□ 1.13
PDE6B-205ENST00000465426 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
PDE6B-205ENST00000465426 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
PDE6B-205ENST00000465426 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
PDE6B-205ENST00000465426 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
PDE6B-205ENST00000465426 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
PDE6B-205ENST00000465426 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
PDE6B-205ENST00000465426 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
PDE6B-205ENST00000465426 GAPVD1Q14C86 1478 aa22.04■■□□□ 1.12
PDE6B-205ENST00000465426 ABCA10Q8WWZ4 1543 aa22.04■■□□□ 1.12
PDE6B-205ENST00000465426 ABCA5Q8WWZ7 1642 aa22.03■■□□□ 1.12
PDE6B-205ENST00000465426 MAGI1Q96QZ7 1491 aaPredicted RBP22.03■■□□□ 1.12
PDE6B-205ENST00000465426 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
PDE6B-205ENST00000465426 SYNJ2O15056 1496 aa21.96■■□□□ 1.11
PDE6B-205ENST00000465426 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
PDE6B-205ENST00000465426 CYB5RLQ6IPT4 315 aa21.9■■□□□ 1.1
PDE6B-205ENST00000465426 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
PDE6B-205ENST00000465426 ADAMTS12P58397 1594 aa21.85■■□□□ 1.09
PDE6B-205ENST00000465426 GRIN2AQ12879 1464 aa21.81■■□□□ 1.08
PDE6B-205ENST00000465426 ERICH3Q5RHP9 1530 aa21.76■■□□□ 1.07
PDE6B-205ENST00000465426 CEP170Q5SW79 1584 aa21.76■■□□□ 1.07
PDE6B-205ENST00000465426 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
PDE6B-205ENST00000465426 NUP160Q12769 1436 aa21.69■■□□□ 1.06
PDE6B-205ENST00000465426 ERCC6L2Q5T890 1561 aa21.69■■□□□ 1.06
PDE6B-205ENST00000465426 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
PDE6B-205ENST00000465426 SHROOM2Q13796 1616 aa21.59■■□□□ 1.05
PDE6B-205ENST00000465426 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
PDE6B-205ENST00000465426 IGF1RP08069 1367 aa21.56■■□□□ 1.04
PDE6B-205ENST00000465426 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
PDE6B-205ENST00000465426 CUL7Q14999 1698 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms