RNA–Protein interactions for RNA: ENST00000465383.5

SFXN3-203, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-203ENST00000465383 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
SFXN3-203ENST00000465383 ABCC9O60706 1549 aa20.26■□□□□ 0.83
SFXN3-203ENST00000465383 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
SFXN3-203ENST00000465383 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
SFXN3-203ENST00000465383 NACADO15069 1562 aa19.05■□□□□ 0.64
SFXN3-203ENST00000465383 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
SFXN3-203ENST00000465383 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
SFXN3-203ENST00000465383 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
SFXN3-203ENST00000465383 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
SFXN3-203ENST00000465383 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
SFXN3-203ENST00000465383 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
SFXN3-203ENST00000465383 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
SFXN3-203ENST00000465383 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
SFXN3-203ENST00000465383 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
SFXN3-203ENST00000465383 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
SFXN3-203ENST00000465383 CC2D2AQ9P2K1 1620 aa18.29■□□□□ 0.52
SFXN3-203ENST00000465383 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
SFXN3-203ENST00000465383 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
SFXN3-203ENST00000465383 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
SFXN3-203ENST00000465383 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
SFXN3-203ENST00000465383 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
SFXN3-203ENST00000465383 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
SFXN3-203ENST00000465383 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
SFXN3-203ENST00000465383 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
SFXN3-203ENST00000465383 CUX2O14529 1486 aa17.44■□□□□ 0.38
SFXN3-203ENST00000465383 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
SFXN3-203ENST00000465383 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
SFXN3-203ENST00000465383 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
SFXN3-203ENST00000465383 NESP48681 1621 aa17.36■□□□□ 0.37
SFXN3-203ENST00000465383 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
SFXN3-203ENST00000465383 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
SFXN3-203ENST00000465383 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
SFXN3-203ENST00000465383 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
SFXN3-203ENST00000465383 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
SFXN3-203ENST00000465383 WIZO95785 1651 aa17.1■□□□□ 0.33
SFXN3-203ENST00000465383 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
SFXN3-203ENST00000465383 CADPSQ9ULU8 1353 aa17■□□□□ 0.31
SFXN3-203ENST00000465383 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
SFXN3-203ENST00000465383 WDR62O43379 1518 aa16.96■□□□□ 0.3
SFXN3-203ENST00000465383 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
SFXN3-203ENST00000465383 FANCD2Q9BXW9 1451 aa16.87■□□□□ 0.29
SFXN3-203ENST00000465383 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
SFXN3-203ENST00000465383 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
SFXN3-203ENST00000465383 CFTRP13569 1480 aa16.8■□□□□ 0.28
SFXN3-203ENST00000465383 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
SFXN3-203ENST00000465383 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
SFXN3-203ENST00000465383 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
SFXN3-203ENST00000465383 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
SFXN3-203ENST00000465383 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
SFXN3-203ENST00000465383 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
SFXN3-203ENST00000465383 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
SFXN3-203ENST00000465383 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
SFXN3-203ENST00000465383 EIF4G3O43432 1585 aaKnown RBP16.53■□□□□ 0.24
SFXN3-203ENST00000465383 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
SFXN3-203ENST00000465383 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
SFXN3-203ENST00000465383 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
SFXN3-203ENST00000465383 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
SFXN3-203ENST00000465383 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
SFXN3-203ENST00000465383 CHD1O14646 1710 aa16.44■□□□□ 0.22
SFXN3-203ENST00000465383 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
SFXN3-203ENST00000465383 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
SFXN3-203ENST00000465383 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
SFXN3-203ENST00000465383 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
SFXN3-203ENST00000465383 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
SFXN3-203ENST00000465383 FBLN2P98095 1184 aa16.28■□□□□ 0.2
SFXN3-203ENST00000465383 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
SFXN3-203ENST00000465383 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
SFXN3-203ENST00000465383 SOGA1O94964 1423 aa16.25■□□□□ 0.19
SFXN3-203ENST00000465383 CUX1P39880 1505 aa16.24■□□□□ 0.19
SFXN3-203ENST00000465383 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
SFXN3-203ENST00000465383 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
SFXN3-203ENST00000465383 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
SFXN3-203ENST00000465383 CYB5RLQ6IPT4 315 aa16.21■□□□□ 0.19
SFXN3-203ENST00000465383 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
SFXN3-203ENST00000465383 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
SFXN3-203ENST00000465383 CLASP1Q7Z460 1538 aa16.17■□□□□ 0.18
SFXN3-203ENST00000465383 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
SFXN3-203ENST00000465383 GRIN2BQ13224 1484 aa16.15■□□□□ 0.18
SFXN3-203ENST00000465383 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
SFXN3-203ENST00000465383 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
SFXN3-203ENST00000465383 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
SFXN3-203ENST00000465383 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
SFXN3-203ENST00000465383 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.16
SFXN3-203ENST00000465383 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
SFXN3-203ENST00000465383 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
SFXN3-203ENST00000465383 ADAMTS12P58397 1594 aa16■□□□□ 0.15
SFXN3-203ENST00000465383 BIVM-ERCC5R4GMW8 1640 aa15.99■□□□□ 0.15
SFXN3-203ENST00000465383 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
SFXN3-203ENST00000465383 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
SFXN3-203ENST00000465383 WRNQ14191 1432 aaPredicted RBP eCLIP15.95■□□□□ 0.14
SFXN3-203ENST00000465383 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
SFXN3-203ENST00000465383 ERCC6L2Q5T890 1561 aa15.93■□□□□ 0.14
SFXN3-203ENST00000465383 NUP160Q12769 1436 aa15.87■□□□□ 0.13
SFXN3-203ENST00000465383 SHROOM2Q13796 1616 aa15.86■□□□□ 0.13
SFXN3-203ENST00000465383 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
SFXN3-203ENST00000465383 ERICH3Q5RHP9 1530 aa15.85■□□□□ 0.13
SFXN3-203ENST00000465383 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
SFXN3-203ENST00000465383 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
SFXN3-203ENST00000465383 KIF13AQ9H1H9 1805 aa15.73■□□□□ 0.11
SFXN3-203ENST00000465383 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms