RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
ABCA4-203ENST00000465352 CCDC180Q9P1Z9 1646 aa31.56■■■□□ 2.64
ABCA4-203ENST00000465352 ABCC9O60706 1549 aa31.33■■■□□ 2.61
ABCA4-203ENST00000465352 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
ABCA4-203ENST00000465352 NACADO15069 1562 aa29.81■■■□□ 2.36
ABCA4-203ENST00000465352 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
ABCA4-203ENST00000465352 MYO15BQ96JP2 1530 aa29.48■■■□□ 2.31
ABCA4-203ENST00000465352 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
ABCA4-203ENST00000465352 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
ABCA4-203ENST00000465352 UNC13AQ9UPW8 1703 aa29.18■■■□□ 2.26
ABCA4-203ENST00000465352 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
ABCA4-203ENST00000465352 DNAJC5BQ9UF47 199 aa29.13■■■□□ 2.25
ABCA4-203ENST00000465352 BICRAQ9NZM4 1560 aa28.98■■■□□ 2.23
ABCA4-203ENST00000465352 SCRIBQ14160 1630 aa28.74■■■□□ 2.19
ABCA4-203ENST00000465352 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
ABCA4-203ENST00000465352 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
ABCA4-203ENST00000465352 EIF4G1Q04637 1599 aaKnown RBP28.29■■■□□ 2.12
ABCA4-203ENST00000465352 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
ABCA4-203ENST00000465352 NCAPD3P42695 1498 aa27.51■■■□□ 2
ABCA4-203ENST00000465352 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
ABCA4-203ENST00000465352 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
ABCA4-203ENST00000465352 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
ABCA4-203ENST00000465352 BAZ1AQ9NRL2 1556 aaPredicted RBP27.4■■□□□ 1.98
ABCA4-203ENST00000465352 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
ABCA4-203ENST00000465352 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
ABCA4-203ENST00000465352 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
ABCA4-203ENST00000465352 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
ABCA4-203ENST00000465352 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
ABCA4-203ENST00000465352 CUX2O14529 1486 aa26.94■■□□□ 1.9
ABCA4-203ENST00000465352 NESP48681 1621 aa26.94■■□□□ 1.9
ABCA4-203ENST00000465352 LAMC3Q9Y6N6 1575 aa26.86■■□□□ 1.89
ABCA4-203ENST00000465352 WIZO95785 1651 aa26.83■■□□□ 1.89
ABCA4-203ENST00000465352 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
ABCA4-203ENST00000465352 RSF1Q96T23 1441 aaPredicted RBP26.71■■□□□ 1.87
ABCA4-203ENST00000465352 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
ABCA4-203ENST00000465352 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
ABCA4-203ENST00000465352 THOC2Q8NI27 1593 aaKnown RBP26.61■■□□□ 1.85
ABCA4-203ENST00000465352 KIF21AQ7Z4S6 1674 aa26.6■■□□□ 1.85
ABCA4-203ENST00000465352 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
ABCA4-203ENST00000465352 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
ABCA4-203ENST00000465352 CFTRP13569 1480 aa26.42■■□□□ 1.82
ABCA4-203ENST00000465352 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
ABCA4-203ENST00000465352 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
ABCA4-203ENST00000465352 WDR62O43379 1518 aa26.34■■□□□ 1.81
ABCA4-203ENST00000465352 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
ABCA4-203ENST00000465352 PRDM2Q13029 1718 aa26.16■■□□□ 1.78
ABCA4-203ENST00000465352 URB2Q14146 1524 aaKnown RBP26.1■■□□□ 1.77
ABCA4-203ENST00000465352 ABCC8Q09428 1581 aa25.95■■□□□ 1.74
ABCA4-203ENST00000465352 TOPBP1Q92547 1522 aa25.89■■□□□ 1.74
ABCA4-203ENST00000465352 IFT140Q96RY7 1462 aa25.88■■□□□ 1.73
ABCA4-203ENST00000465352 DNMBPQ6XZF7 1577 aa25.83■■□□□ 1.73
ABCA4-203ENST00000465352 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
ABCA4-203ENST00000465352 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
ABCA4-203ENST00000465352 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
ABCA4-203ENST00000465352 POLA1P09884 1462 aaPredicted RBP25.64■■□□□ 1.69
ABCA4-203ENST00000465352 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
ABCA4-203ENST00000465352 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
ABCA4-203ENST00000465352 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
ABCA4-203ENST00000465352 SOGA1O94964 1423 aa25.58■■□□□ 1.69
ABCA4-203ENST00000465352 AQRO60306 1485 aaKnown RBP eCLIP25.58■■□□□ 1.69
ABCA4-203ENST00000465352 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
ABCA4-203ENST00000465352 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
ABCA4-203ENST00000465352 CUX1P39880 1505 aa25.5■■□□□ 1.67
ABCA4-203ENST00000465352 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
ABCA4-203ENST00000465352 FBLN2P98095 1184 aa25.45■■□□□ 1.66
ABCA4-203ENST00000465352 WDR97A6NE52 1622 aa25.44■■□□□ 1.66
ABCA4-203ENST00000465352 CHD1O14646 1710 aa25.38■■□□□ 1.65
ABCA4-203ENST00000465352 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
ABCA4-203ENST00000465352 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
ABCA4-203ENST00000465352 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
ABCA4-203ENST00000465352 GRIN2BQ13224 1484 aa25.33■■□□□ 1.65
ABCA4-203ENST00000465352 SNAPC4Q5SXM2 1469 aa25.32■■□□□ 1.64
ABCA4-203ENST00000465352 CHMP7Q8WUX9 453 aaPredicted RBP25.31■■□□□ 1.64
ABCA4-203ENST00000465352 MAGI1Q96QZ7 1491 aaPredicted RBP25.3■■□□□ 1.64
ABCA4-203ENST00000465352 ARHGEF11O15085 1522 aa25.3■■□□□ 1.64
ABCA4-203ENST00000465352 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
ABCA4-203ENST00000465352 ABCA10Q8WWZ4 1543 aa25.26■■□□□ 1.63
ABCA4-203ENST00000465352 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
ABCA4-203ENST00000465352 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
ABCA4-203ENST00000465352 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
ABCA4-203ENST00000465352 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
ABCA4-203ENST00000465352 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
ABCA4-203ENST00000465352 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
ABCA4-203ENST00000465352 CYB5RLQ6IPT4 315 aa25.16■■□□□ 1.62
ABCA4-203ENST00000465352 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
ABCA4-203ENST00000465352 CLASP1Q7Z460 1538 aa25.09■■□□□ 1.61
ABCA4-203ENST00000465352 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
ABCA4-203ENST00000465352 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
ABCA4-203ENST00000465352 FHAD1B1AJZ9 1412 aa24.96■■□□□ 1.59
ABCA4-203ENST00000465352 ADAMTS12P58397 1594 aa24.96■■□□□ 1.59
ABCA4-203ENST00000465352 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
ABCA4-203ENST00000465352 NUP160Q12769 1436 aa24.86■■□□□ 1.57
ABCA4-203ENST00000465352 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
ABCA4-203ENST00000465352 CEP170Q5SW79 1584 aa24.82■■□□□ 1.56
ABCA4-203ENST00000465352 KIF27Q86VH2 1401 aa24.77■■□□□ 1.56
ABCA4-203ENST00000465352 SHROOM2Q13796 1616 aa24.71■■□□□ 1.55
ABCA4-203ENST00000465352 IGF1RP08069 1367 aa24.69■■□□□ 1.54
ABCA4-203ENST00000465352 JPH4Q96JJ6 628 aa24.69■■□□□ 1.54
ABCA4-203ENST00000465352 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
ABCA4-203ENST00000465352 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms