RNA–Protein interactions for RNA: ENST00000465320.1

CYTH3-204, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-204ENST00000465320 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
CYTH3-204ENST00000465320 ABCC9O60706 1549 aa33.25■■■□□ 2.91
CYTH3-204ENST00000465320 CCDC180Q9P1Z9 1646 aa32.7■■■□□ 2.83
CYTH3-204ENST00000465320 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
CYTH3-204ENST00000465320 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
CYTH3-204ENST00000465320 NACADO15069 1562 aa31.05■■■□□ 2.56
CYTH3-204ENST00000465320 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
CYTH3-204ENST00000465320 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
CYTH3-204ENST00000465320 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
CYTH3-204ENST00000465320 BICRAQ9NZM4 1560 aa30.6■■■□□ 2.49
CYTH3-204ENST00000465320 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
CYTH3-204ENST00000465320 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
CYTH3-204ENST00000465320 ZCCHC6Q5VYS8 1495 aaKnown RBP29.96■■■□□ 2.39
CYTH3-204ENST00000465320 CECR2Q9BXF3 1484 aa29.96■■■□□ 2.39
CYTH3-204ENST00000465320 SHROOM4Q9ULL8 1493 aa29.94■■■□□ 2.38
CYTH3-204ENST00000465320 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
CYTH3-204ENST00000465320 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
CYTH3-204ENST00000465320 EIF4G1Q04637 1599 aaKnown RBP29.81■■■□□ 2.36
CYTH3-204ENST00000465320 DNAJC5Q9H3Z4 198 aa29.41■■■□□ 2.3
CYTH3-204ENST00000465320 CUX2O14529 1486 aa28.78■■■□□ 2.2
CYTH3-204ENST00000465320 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
CYTH3-204ENST00000465320 ERCC6Q03468 1493 aa28.64■■■□□ 2.17
CYTH3-204ENST00000465320 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
CYTH3-204ENST00000465320 NESP48681 1621 aa28.47■■■□□ 2.15
CYTH3-204ENST00000465320 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
CYTH3-204ENST00000465320 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
CYTH3-204ENST00000465320 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
CYTH3-204ENST00000465320 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
CYTH3-204ENST00000465320 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
CYTH3-204ENST00000465320 BAZ1AQ9NRL2 1556 aaPredicted RBP28.14■■■□□ 2.1
CYTH3-204ENST00000465320 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
CYTH3-204ENST00000465320 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
CYTH3-204ENST00000465320 KIF21AQ7Z4S6 1674 aa28.05■■■□□ 2.08
CYTH3-204ENST00000465320 MROH2BQ7Z745 1585 aa28■■■□□ 2.07
CYTH3-204ENST00000465320 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
CYTH3-204ENST00000465320 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
CYTH3-204ENST00000465320 CADPSQ9ULU8 1353 aa27.81■■■□□ 2.04
CYTH3-204ENST00000465320 MRC2Q9UBG0 1479 aa27.74■■■□□ 2.03
CYTH3-204ENST00000465320 WDR62O43379 1518 aa27.71■■■□□ 2.03
CYTH3-204ENST00000465320 WIZO95785 1651 aa27.65■■■□□ 2.02
CYTH3-204ENST00000465320 CEP164Q9UPV0 1460 aa27.51■■■□□ 2
CYTH3-204ENST00000465320 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
CYTH3-204ENST00000465320 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
CYTH3-204ENST00000465320 CFTRP13569 1480 aa27.39■■□□□ 1.98
CYTH3-204ENST00000465320 URB2Q14146 1524 aaKnown RBP27.34■■□□□ 1.97
CYTH3-204ENST00000465320 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
CYTH3-204ENST00000465320 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
CYTH3-204ENST00000465320 RIMBP3CA6NJZ7 1639 aa27.15■■□□□ 1.94
CYTH3-204ENST00000465320 RIMBP3BA6NNM3 1639 aa27.15■■□□□ 1.94
CYTH3-204ENST00000465320 RIMBP3Q9UFD9 1639 aa27.15■■□□□ 1.94
CYTH3-204ENST00000465320 ZNF608Q9ULD9 1512 aaPredicted RBP27.1■■□□□ 1.93
CYTH3-204ENST00000465320 PRDM2Q13029 1718 aa27.05■■□□□ 1.92
CYTH3-204ENST00000465320 ARHGEF11O15085 1522 aa26.99■■□□□ 1.91
CYTH3-204ENST00000465320 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
CYTH3-204ENST00000465320 CCDC88BA6NC98 1476 aa26.95■■□□□ 1.91
CYTH3-204ENST00000465320 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
CYTH3-204ENST00000465320 CYB5RLQ6IPT4 315 aa26.85■■□□□ 1.89
CYTH3-204ENST00000465320 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
CYTH3-204ENST00000465320 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
CYTH3-204ENST00000465320 CHD1O14646 1710 aa26.78■■□□□ 1.88
CYTH3-204ENST00000465320 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
CYTH3-204ENST00000465320 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
CYTH3-204ENST00000465320 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
CYTH3-204ENST00000465320 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
CYTH3-204ENST00000465320 TRHP20396 242 aaPredicted RBP26.64■■□□□ 1.86
CYTH3-204ENST00000465320 FBLN2P98095 1184 aa26.63■■□□□ 1.85
CYTH3-204ENST00000465320 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
CYTH3-204ENST00000465320 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
CYTH3-204ENST00000465320 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
CYTH3-204ENST00000465320 SOGA1O94964 1423 aa26.49■■□□□ 1.83
CYTH3-204ENST00000465320 CLASP1Q7Z460 1538 aa26.45■■□□□ 1.83
CYTH3-204ENST00000465320 SNAPC4Q5SXM2 1469 aa26.43■■□□□ 1.82
CYTH3-204ENST00000465320 FGD5Q6ZNL6 1462 aa26.38■■□□□ 1.81
CYTH3-204ENST00000465320 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
CYTH3-204ENST00000465320 CUX1P39880 1505 aa26.33■■□□□ 1.81
CYTH3-204ENST00000465320 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
CYTH3-204ENST00000465320 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
CYTH3-204ENST00000465320 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
CYTH3-204ENST00000465320 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
CYTH3-204ENST00000465320 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
CYTH3-204ENST00000465320 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
CYTH3-204ENST00000465320 PBRM1Q86U86 1689 aa26.16■■□□□ 1.78
CYTH3-204ENST00000465320 AEBP2Q6ZN18 517 aaPredicted RBP26.16■■□□□ 1.78
CYTH3-204ENST00000465320 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
CYTH3-204ENST00000465320 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
CYTH3-204ENST00000465320 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
CYTH3-204ENST00000465320 GRIN2AQ12879 1464 aa25.96■■□□□ 1.75
CYTH3-204ENST00000465320 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
CYTH3-204ENST00000465320 NUP160Q12769 1436 aa25.91■■□□□ 1.74
CYTH3-204ENST00000465320 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
CYTH3-204ENST00000465320 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
CYTH3-204ENST00000465320 KIF13AQ9H1H9 1805 aa25.81■■□□□ 1.72
CYTH3-204ENST00000465320 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.72
CYTH3-204ENST00000465320 FHAD1B1AJZ9 1412 aa25.78■■□□□ 1.72
CYTH3-204ENST00000465320 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
CYTH3-204ENST00000465320 TOP2BQ02880 1626 aa25.72■■□□□ 1.71
CYTH3-204ENST00000465320 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
CYTH3-204ENST00000465320 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
CYTH3-204ENST00000465320 JPH4Q96JJ6 628 aa25.67■■□□□ 1.7
CYTH3-204ENST00000465320 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms