RNA–Protein interactions for RNA: ENST00000465292.5

KCNS3-204, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

TSL 4

Gene KCNS3, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-204ENST00000465292 NISCHQ9Y2I1 1504 aa53.48■■■■■ 6.15
KCNS3-204ENST00000465292 CCDC180Q9P1Z9 1646 aa47.67■■■■■ 5.22
KCNS3-204ENST00000465292 ABCC9O60706 1549 aa47.41■■■■■ 5.18
KCNS3-204ENST00000465292 RB1CC1Q8TDY2 1594 aa45.24■■■■■ 4.83
KCNS3-204ENST00000465292 DCAF8L2P0C7V8 631 aa45.19■■■■■ 4.82
KCNS3-204ENST00000465292 NACADO15069 1562 aa45.03■■■■■ 4.8
KCNS3-204ENST00000465292 MYO15BQ96JP2 1530 aa44.52■■■■■ 4.72
KCNS3-204ENST00000465292 ZCCHC6Q5VYS8 1495 aaKnown RBP44.39■■■■■ 4.7
KCNS3-204ENST00000465292 PABPN1Q86U42 306 aaKnown RBP eCLIP44.31■■■■■ 4.68
KCNS3-204ENST00000465292 DCAF1Q9Y4B6 1507 aa44.14■■■■■ 4.66
KCNS3-204ENST00000465292 UNC13AQ9UPW8 1703 aa44.13■■■■■ 4.66
KCNS3-204ENST00000465292 DNAJC5BQ9UF47 199 aa44.12■■■■■ 4.65
KCNS3-204ENST00000465292 BICRAQ9NZM4 1560 aa43.89■■■■■ 4.62
KCNS3-204ENST00000465292 SCRIBQ14160 1630 aa43.59■■■■■ 4.57
KCNS3-204ENST00000465292 SHROOM4Q9ULL8 1493 aa43.29■■■■■ 4.52
KCNS3-204ENST00000465292 EIF4G1Q04637 1599 aaKnown RBP42.79■■■■■ 4.44
KCNS3-204ENST00000465292 CC2D2AQ9P2K1 1620 aa42.78■■■■■ 4.44
KCNS3-204ENST00000465292 CECR2Q9BXF3 1484 aa42.64■■■■■ 4.42
KCNS3-204ENST00000465292 NCAPD3P42695 1498 aa41.61■■■■■ 4.25
KCNS3-204ENST00000465292 SMARCA4P51532 1647 aa41.58■■■■■ 4.25
KCNS3-204ENST00000465292 ATAD2BQ9ULI0 1458 aa41.56■■■■■ 4.24
KCNS3-204ENST00000465292 BAZ1AQ9NRL2 1556 aaPredicted RBP41.46■■■■■ 4.23
KCNS3-204ENST00000465292 SMARCA2P51531 1590 aa41.43■■■■■ 4.22
KCNS3-204ENST00000465292 HMGXB3Q12766 1538 aa41.28■■■■■ 4.2
KCNS3-204ENST00000465292 MROH2BQ7Z745 1585 aa41.24■■■■■ 4.19
KCNS3-204ENST00000465292 BAZ1BQ9UIG0 1483 aaKnown RBP41.19■■■■■ 4.18
KCNS3-204ENST00000465292 PEG3Q9GZU2 1588 aa41.13■■■■■ 4.18
KCNS3-204ENST00000465292 ERCC6Q03468 1493 aa40.9■■■■■ 4.14
KCNS3-204ENST00000465292 NESP48681 1621 aa40.85■■■■■ 4.13
KCNS3-204ENST00000465292 WIZO95785 1651 aa40.75■■■■■ 4.11
KCNS3-204ENST00000465292 CUX2O14529 1486 aa40.59■■■■■ 4.09
KCNS3-204ENST00000465292 RSF1Q96T23 1441 aaPredicted RBP40.58■■■■■ 4.09
KCNS3-204ENST00000465292 LAMC3Q9Y6N6 1575 aa40.56■■■■■ 4.08
KCNS3-204ENST00000465292 CADPSQ9ULU8 1353 aa40.41■■■■■ 4.06
KCNS3-204ENST00000465292 PDS5BQ9NTI5 1447 aa40.39■■■■■ 4.06
KCNS3-204ENST00000465292 TOP2AP11388 1531 aaKnown RBP40.24■■■■■ 4.03
KCNS3-204ENST00000465292 KIF21AQ7Z4S6 1674 aa40.24■■■■■ 4.03
KCNS3-204ENST00000465292 THOC2Q8NI27 1593 aaKnown RBP40.23■■■■■ 4.03
KCNS3-204ENST00000465292 DNAJC5Q9H3Z4 198 aa40.16■■■■■ 4.02
KCNS3-204ENST00000465292 CFTRP13569 1480 aa40■■■■□ 3.99
KCNS3-204ENST00000465292 MRC2Q9UBG0 1479 aa39.97■■■■□ 3.99
KCNS3-204ENST00000465292 FANCD2Q9BXW9 1451 aa39.94■■■■□ 3.98
KCNS3-204ENST00000465292 CEP164Q9UPV0 1460 aa39.92■■■■□ 3.98
KCNS3-204ENST00000465292 CCDC88BA6NC98 1476 aa39.85■■■■□ 3.97
KCNS3-204ENST00000465292 WDR62O43379 1518 aa39.81■■■■□ 3.96
KCNS3-204ENST00000465292 URB2Q14146 1524 aaKnown RBP39.55■■■■□ 3.92
KCNS3-204ENST00000465292 PRDM2Q13029 1718 aa39.5■■■■□ 3.91
KCNS3-204ENST00000465292 SUPT5HO00267 1087 aaKnown RBP39.29■■■■□ 3.88
KCNS3-204ENST00000465292 TOPBP1Q92547 1522 aa39.21■■■■□ 3.87
KCNS3-204ENST00000465292 ABCC8Q09428 1581 aa39.15■■■■□ 3.86
KCNS3-204ENST00000465292 IFT140Q96RY7 1462 aa39.11■■■■□ 3.85
KCNS3-204ENST00000465292 DNMBPQ6XZF7 1577 aa39.08■■■■□ 3.85
KCNS3-204ENST00000465292 ZNF608Q9ULD9 1512 aaPredicted RBP39.02■■■■□ 3.84
KCNS3-204ENST00000465292 OSCARQ8IYS5 282 aa38.96■■■■□ 3.83
KCNS3-204ENST00000465292 POLA1P09884 1462 aaPredicted RBP38.85■■■■□ 3.81
KCNS3-204ENST00000465292 TARBP1Q13395 1621 aaKnown RBP38.78■■■■□ 3.8
KCNS3-204ENST00000465292 AQRO60306 1485 aaKnown RBP eCLIP38.77■■■■□ 3.8
KCNS3-204ENST00000465292 EIF4G3O43432 1585 aaKnown RBP38.75■■■■□ 3.79
KCNS3-204ENST00000465292 RAD54L2Q9Y4B4 1467 aa38.74■■■■□ 3.79
KCNS3-204ENST00000465292 SOGA1O94964 1423 aa38.74■■■■□ 3.79
KCNS3-204ENST00000465292 CUX1P39880 1505 aa38.7■■■■□ 3.79
KCNS3-204ENST00000465292 FGD5Q6ZNL6 1462 aa38.67■■■■□ 3.78
KCNS3-204ENST00000465292 TRIM41Q8WV44 630 aa38.67■■■■□ 3.78
KCNS3-204ENST00000465292 TDRD9Q8NDG6 1382 aaKnown RBP38.63■■■■□ 3.77
KCNS3-204ENST00000465292 FBLN2P98095 1184 aa38.52■■■■□ 3.76
KCNS3-204ENST00000465292 WDR97A6NE52 1622 aa38.37■■■■□ 3.73
KCNS3-204ENST00000465292 CHD1O14646 1710 aa38.36■■■■□ 3.73
KCNS3-204ENST00000465292 SNAPC4Q5SXM2 1469 aa38.34■■■■□ 3.73
KCNS3-204ENST00000465292 GRIN2BQ13224 1484 aa38.3■■■■□ 3.72
KCNS3-204ENST00000465292 CHMP7Q8WUX9 453 aaPredicted RBP38.27■■■■□ 3.72
KCNS3-204ENST00000465292 WRNQ14191 1432 aaPredicted RBP eCLIP38.27■■■■□ 3.72
KCNS3-204ENST00000465292 RIMBP3CA6NJZ7 1639 aa38.27■■■■□ 3.72
KCNS3-204ENST00000465292 RIMBP3BA6NNM3 1639 aa38.27■■■■□ 3.72
KCNS3-204ENST00000465292 RIMBP3Q9UFD9 1639 aa38.27■■■■□ 3.72
KCNS3-204ENST00000465292 ABCA10Q8WWZ4 1543 aa38.24■■■■□ 3.71
KCNS3-204ENST00000465292 GAPVD1Q14C86 1478 aa38.24■■■■□ 3.71
KCNS3-204ENST00000465292 ARHGEF11O15085 1522 aa38.22■■■■□ 3.71
KCNS3-204ENST00000465292 MAGI1Q96QZ7 1491 aaPredicted RBP38.22■■■■□ 3.71
KCNS3-204ENST00000465292 TOP2BQ02880 1626 aa38.17■■■■□ 3.7
KCNS3-204ENST00000465292 SYNJ1O43426 1573 aa38.16■■■■□ 3.7
KCNS3-204ENST00000465292 BIVM-ERCC5R4GMW8 1640 aa38.14■■■■□ 3.7
KCNS3-204ENST00000465292 SYNJ2O15056 1496 aa38.11■■■■□ 3.69
KCNS3-204ENST00000465292 ABCA5Q8WWZ7 1642 aa38.09■■■■□ 3.69
KCNS3-204ENST00000465292 PBRM1Q86U86 1689 aa38.09■■■■□ 3.69
KCNS3-204ENST00000465292 CYB5RLQ6IPT4 315 aa38.05■■■■□ 3.68
KCNS3-204ENST00000465292 CLASP1Q7Z460 1538 aa37.95■■■■□ 3.67
KCNS3-204ENST00000465292 ARAP1Q96P48 1450 aa37.88■■■■□ 3.65
KCNS3-204ENST00000465292 GRIN2AQ12879 1464 aa37.79■■■■□ 3.64
KCNS3-204ENST00000465292 ADAMTS12P58397 1594 aa37.78■■■■□ 3.64
KCNS3-204ENST00000465292 FHAD1B1AJZ9 1412 aa37.77■■■■□ 3.64
KCNS3-204ENST00000465292 ERICH3Q5RHP9 1530 aa37.76■■■■□ 3.63
KCNS3-204ENST00000465292 NUP160Q12769 1436 aa37.63■■■■□ 3.61
KCNS3-204ENST00000465292 CEP170Q5SW79 1584 aa37.62■■■■□ 3.61
KCNS3-204ENST00000465292 KIF27Q86VH2 1401 aa37.53■■■■□ 3.6
KCNS3-204ENST00000465292 TRHP20396 242 aaPredicted RBP37.5■■■■□ 3.59
KCNS3-204ENST00000465292 IGF1RP08069 1367 aa37.48■■■■□ 3.59
KCNS3-204ENST00000465292 ERCC6L2Q5T890 1561 aa37.45■■■■□ 3.59
KCNS3-204ENST00000465292 JPH4Q96JJ6 628 aa37.38■■■■□ 3.57
KCNS3-204ENST00000465292 SHROOM2Q13796 1616 aa37.36■■■■□ 3.57
KCNS3-204ENST00000465292 PRG4Q92954 1404 aaPredicted RBP37.31■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms