RNA–Protein interactions for RNA: ENST00000465250.6

SMIM7-206, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,281 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-206ENST00000465250 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
SMIM7-206ENST00000465250 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
SMIM7-206ENST00000465250 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
SMIM7-206ENST00000465250 ABCC9O60706 1549 aa20.83■□□□□ 0.92
SMIM7-206ENST00000465250 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
SMIM7-206ENST00000465250 NACADO15069 1562 aa20.12■□□□□ 0.81
SMIM7-206ENST00000465250 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
SMIM7-206ENST00000465250 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
SMIM7-206ENST00000465250 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
SMIM7-206ENST00000465250 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
SMIM7-206ENST00000465250 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
SMIM7-206ENST00000465250 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
SMIM7-206ENST00000465250 PABPN1Q86U42 306 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMIM7-206ENST00000465250 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
SMIM7-206ENST00000465250 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
SMIM7-206ENST00000465250 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
SMIM7-206ENST00000465250 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
SMIM7-206ENST00000465250 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
SMIM7-206ENST00000465250 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.61
SMIM7-206ENST00000465250 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
SMIM7-206ENST00000465250 BAZ1AQ9NRL2 1556 aaPredicted RBP18.65■□□□□ 0.58
SMIM7-206ENST00000465250 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
SMIM7-206ENST00000465250 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
SMIM7-206ENST00000465250 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
SMIM7-206ENST00000465250 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.55
SMIM7-206ENST00000465250 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
SMIM7-206ENST00000465250 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
SMIM7-206ENST00000465250 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
SMIM7-206ENST00000465250 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
SMIM7-206ENST00000465250 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
SMIM7-206ENST00000465250 WIZO95785 1651 aa18.18■□□□□ 0.5
SMIM7-206ENST00000465250 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
SMIM7-206ENST00000465250 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
SMIM7-206ENST00000465250 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
SMIM7-206ENST00000465250 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
SMIM7-206ENST00000465250 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.47
SMIM7-206ENST00000465250 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
SMIM7-206ENST00000465250 NESP48681 1621 aa17.96■□□□□ 0.47
SMIM7-206ENST00000465250 CUX2O14529 1486 aa17.89■□□□□ 0.45
SMIM7-206ENST00000465250 CFTRP13569 1480 aa17.88■□□□□ 0.45
SMIM7-206ENST00000465250 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
SMIM7-206ENST00000465250 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
SMIM7-206ENST00000465250 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
SMIM7-206ENST00000465250 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
SMIM7-206ENST00000465250 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
SMIM7-206ENST00000465250 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
SMIM7-206ENST00000465250 THOC2Q8NI27 1593 aaKnown RBP17.72■□□□□ 0.43
SMIM7-206ENST00000465250 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
SMIM7-206ENST00000465250 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
SMIM7-206ENST00000465250 WDR62O43379 1518 aa17.65■□□□□ 0.42
SMIM7-206ENST00000465250 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
SMIM7-206ENST00000465250 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
SMIM7-206ENST00000465250 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
SMIM7-206ENST00000465250 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
SMIM7-206ENST00000465250 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
SMIM7-206ENST00000465250 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
SMIM7-206ENST00000465250 SOGA1O94964 1423 aa17.3■□□□□ 0.36
SMIM7-206ENST00000465250 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
SMIM7-206ENST00000465250 CUX1P39880 1505 aa17.29■□□□□ 0.36
SMIM7-206ENST00000465250 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
SMIM7-206ENST00000465250 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
SMIM7-206ENST00000465250 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
SMIM7-206ENST00000465250 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
SMIM7-206ENST00000465250 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.35
SMIM7-206ENST00000465250 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
SMIM7-206ENST00000465250 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
SMIM7-206ENST00000465250 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
SMIM7-206ENST00000465250 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
SMIM7-206ENST00000465250 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
SMIM7-206ENST00000465250 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMIM7-206ENST00000465250 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
SMIM7-206ENST00000465250 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
SMIM7-206ENST00000465250 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
SMIM7-206ENST00000465250 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
SMIM7-206ENST00000465250 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
SMIM7-206ENST00000465250 MAGI1Q96QZ7 1491 aaPredicted RBP17.09■□□□□ 0.33
SMIM7-206ENST00000465250 FBLN2P98095 1184 aa17.05■□□□□ 0.32
SMIM7-206ENST00000465250 CHMP7Q8WUX9 453 aaPredicted RBP17.05■□□□□ 0.32
SMIM7-206ENST00000465250 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
SMIM7-206ENST00000465250 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
SMIM7-206ENST00000465250 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
SMIM7-206ENST00000465250 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
SMIM7-206ENST00000465250 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
SMIM7-206ENST00000465250 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
SMIM7-206ENST00000465250 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
SMIM7-206ENST00000465250 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
SMIM7-206ENST00000465250 CHD1O14646 1710 aa16.92■□□□□ 0.3
SMIM7-206ENST00000465250 FOXD1Q16676 465 aa16.91■□□□□ 0.3
SMIM7-206ENST00000465250 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
SMIM7-206ENST00000465250 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
SMIM7-206ENST00000465250 IGF1RP08069 1367 aa16.82■□□□□ 0.28
SMIM7-206ENST00000465250 CUL7Q14999 1698 aa16.81■□□□□ 0.28
SMIM7-206ENST00000465250 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
SMIM7-206ENST00000465250 NUP160Q12769 1436 aa16.79■□□□□ 0.28
SMIM7-206ENST00000465250 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
SMIM7-206ENST00000465250 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.27
SMIM7-206ENST00000465250 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
SMIM7-206ENST00000465250 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
SMIM7-206ENST00000465250 RIMBP3Q9UFD9 1639 aa16.74■□□□□ 0.27
SMIM7-206ENST00000465250 EEA1Q15075 1411 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms