RNA–Protein interactions for RNA: ENST00000465237.6

PGAP2-213, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 1 (best)

Gene PGAP2, Length 962 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-213ENST00000465237 NISCHQ9Y2I1 1504 aa35.52■■■■□ 3.28
PGAP2-213ENST00000465237 ABCC9O60706 1549 aa32.97■■■□□ 2.87
PGAP2-213ENST00000465237 CCDC180Q9P1Z9 1646 aa32.2■■■□□ 2.75
PGAP2-213ENST00000465237 DNAJC5BQ9UF47 199 aa31.59■■■□□ 2.65
PGAP2-213ENST00000465237 RB1CC1Q8TDY2 1594 aa31.06■■■□□ 2.56
PGAP2-213ENST00000465237 NACADO15069 1562 aa30.66■■■□□ 2.5
PGAP2-213ENST00000465237 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
PGAP2-213ENST00000465237 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
PGAP2-213ENST00000465237 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
PGAP2-213ENST00000465237 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
PGAP2-213ENST00000465237 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
PGAP2-213ENST00000465237 CECR2Q9BXF3 1484 aa29.79■■■□□ 2.36
PGAP2-213ENST00000465237 CC2D2AQ9P2K1 1620 aa29.73■■■□□ 2.35
PGAP2-213ENST00000465237 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
PGAP2-213ENST00000465237 DNAJC5Q9H3Z4 198 aa29.64■■■□□ 2.34
PGAP2-213ENST00000465237 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
PGAP2-213ENST00000465237 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
PGAP2-213ENST00000465237 SCRIBQ14160 1630 aa29.28■■■□□ 2.28
PGAP2-213ENST00000465237 ZCCHC6Q5VYS8 1495 aaKnown RBP29.24■■■□□ 2.27
PGAP2-213ENST00000465237 CUX2O14529 1486 aa28.74■■■□□ 2.19
PGAP2-213ENST00000465237 ERCC6Q03468 1493 aa28.57■■■□□ 2.16
PGAP2-213ENST00000465237 NCAPD3P42695 1498 aa28.32■■■□□ 2.12
PGAP2-213ENST00000465237 ATAD2BQ9ULI0 1458 aa28.1■■■□□ 2.09
PGAP2-213ENST00000465237 NESP48681 1621 aa28.07■■■□□ 2.08
PGAP2-213ENST00000465237 TRIM41Q8WV44 630 aa28.05■■■□□ 2.08
PGAP2-213ENST00000465237 SMARCA2P51531 1590 aa28.02■■■□□ 2.08
PGAP2-213ENST00000465237 HMGXB3Q12766 1538 aa28■■■□□ 2.07
PGAP2-213ENST00000465237 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
PGAP2-213ENST00000465237 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
PGAP2-213ENST00000465237 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
PGAP2-213ENST00000465237 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
PGAP2-213ENST00000465237 PDS5BQ9NTI5 1447 aa27.72■■■□□ 2.03
PGAP2-213ENST00000465237 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
PGAP2-213ENST00000465237 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
PGAP2-213ENST00000465237 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
PGAP2-213ENST00000465237 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
PGAP2-213ENST00000465237 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
PGAP2-213ENST00000465237 OSCARQ8IYS5 282 aa27.41■■□□□ 1.98
PGAP2-213ENST00000465237 WDR62O43379 1518 aa27.38■■□□□ 1.97
PGAP2-213ENST00000465237 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
PGAP2-213ENST00000465237 CEP164Q9UPV0 1460 aa27.21■■□□□ 1.95
PGAP2-213ENST00000465237 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
PGAP2-213ENST00000465237 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
PGAP2-213ENST00000465237 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
PGAP2-213ENST00000465237 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
PGAP2-213ENST00000465237 WIZO95785 1651 aa26.98■■□□□ 1.91
PGAP2-213ENST00000465237 CFTRP13569 1480 aa26.93■■□□□ 1.9
PGAP2-213ENST00000465237 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.89
PGAP2-213ENST00000465237 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
PGAP2-213ENST00000465237 CYB5RLQ6IPT4 315 aa26.8■■□□□ 1.88
PGAP2-213ENST00000465237 TRHP20396 242 aaPredicted RBP26.79■■□□□ 1.88
PGAP2-213ENST00000465237 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
PGAP2-213ENST00000465237 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
PGAP2-213ENST00000465237 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
PGAP2-213ENST00000465237 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
PGAP2-213ENST00000465237 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
PGAP2-213ENST00000465237 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
PGAP2-213ENST00000465237 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
PGAP2-213ENST00000465237 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
PGAP2-213ENST00000465237 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
PGAP2-213ENST00000465237 FBLN2P98095 1184 aa26.48■■□□□ 1.83
PGAP2-213ENST00000465237 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
PGAP2-213ENST00000465237 CHD1O14646 1710 aa26.46■■□□□ 1.83
PGAP2-213ENST00000465237 AQRO60306 1485 aaKnown RBP eCLIP26.4■■□□□ 1.82
PGAP2-213ENST00000465237 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
PGAP2-213ENST00000465237 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.8
PGAP2-213ENST00000465237 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
PGAP2-213ENST00000465237 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
PGAP2-213ENST00000465237 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
PGAP2-213ENST00000465237 TDRD9Q8NDG6 1382 aaKnown RBP26.13■■□□□ 1.77
PGAP2-213ENST00000465237 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
PGAP2-213ENST00000465237 SOGA1O94964 1423 aa26.1■■□□□ 1.77
PGAP2-213ENST00000465237 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
PGAP2-213ENST00000465237 RAD54L2Q9Y4B4 1467 aa26.09■■□□□ 1.77
PGAP2-213ENST00000465237 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
PGAP2-213ENST00000465237 WDR97A6NE52 1622 aa26■■□□□ 1.75
PGAP2-213ENST00000465237 MAGI1Q96QZ7 1491 aaPredicted RBP26■■□□□ 1.75
PGAP2-213ENST00000465237 GAPVD1Q14C86 1478 aa25.96■■□□□ 1.75
PGAP2-213ENST00000465237 GRIN2BQ13224 1484 aa25.94■■□□□ 1.74
PGAP2-213ENST00000465237 SYNJ2O15056 1496 aa25.93■■□□□ 1.74
PGAP2-213ENST00000465237 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
PGAP2-213ENST00000465237 PBRM1Q86U86 1689 aa25.73■■□□□ 1.71
PGAP2-213ENST00000465237 CUX1P39880 1505 aa25.73■■□□□ 1.71
PGAP2-213ENST00000465237 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
PGAP2-213ENST00000465237 GRIN2AQ12879 1464 aa25.58■■□□□ 1.69
PGAP2-213ENST00000465237 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.68
PGAP2-213ENST00000465237 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
PGAP2-213ENST00000465237 KIF13AQ9H1H9 1805 aa25.57■■□□□ 1.68
PGAP2-213ENST00000465237 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
PGAP2-213ENST00000465237 NUP160Q12769 1436 aa25.51■■□□□ 1.67
PGAP2-213ENST00000465237 FAM69CQ0P6D2 419 aa25.46■■□□□ 1.67
PGAP2-213ENST00000465237 SHROOM2Q13796 1616 aa25.45■■□□□ 1.67
PGAP2-213ENST00000465237 NPM1P06748 294 aaKnown RBP eCLIP25.43■■□□□ 1.66
PGAP2-213ENST00000465237 ILDR1Q86SU0 546 aaPredicted RBP25.43■■□□□ 1.66
PGAP2-213ENST00000465237 ADAMTS12P58397 1594 aa25.42■■□□□ 1.66
PGAP2-213ENST00000465237 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
PGAP2-213ENST00000465237 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.659e-6■■■■■ 50.1
PGAP2-213ENST00000465237 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
PGAP2-213ENST00000465237 ABCC10Q5T3U5 1492 aa25.37■■□□□ 1.65
PGAP2-213ENST00000465237 KDM4FA0A1W2PPD8 638 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms