RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 NISCHQ9Y2I1 1504 aa39.21■■■■□ 3.87
NCSTN-210ENST00000465223 ABCC9O60706 1549 aa36.64■■■■□ 3.46
NCSTN-210ENST00000465223 CCDC180Q9P1Z9 1646 aa35.59■■■■□ 3.29
NCSTN-210ENST00000465223 DNAJC5BQ9UF47 199 aa35.29■■■■□ 3.24
NCSTN-210ENST00000465223 RB1CC1Q8TDY2 1594 aa34.36■■■■□ 3.09
NCSTN-210ENST00000465223 PABPN1Q86U42 306 aaKnown RBP eCLIP33.98■■■■□ 3.03
NCSTN-210ENST00000465223 NACADO15069 1562 aa33.86■■■■□ 3.01
NCSTN-210ENST00000465223 UNC13AQ9UPW8 1703 aa33.7■■■□□ 2.98
NCSTN-210ENST00000465223 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
NCSTN-210ENST00000465223 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
NCSTN-210ENST00000465223 CECR2Q9BXF3 1484 aa33.06■■■□□ 2.88
NCSTN-210ENST00000465223 DNAJC5Q9H3Z4 198 aa33.04■■■□□ 2.88
NCSTN-210ENST00000465223 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
NCSTN-210ENST00000465223 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
NCSTN-210ENST00000465223 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
NCSTN-210ENST00000465223 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.82
NCSTN-210ENST00000465223 SCRIBQ14160 1630 aa32.45■■■□□ 2.79
NCSTN-210ENST00000465223 ZCCHC6Q5VYS8 1495 aaKnown RBP32.28■■■□□ 2.76
NCSTN-210ENST00000465223 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
NCSTN-210ENST00000465223 CUX2O14529 1486 aa31.89■■■□□ 2.7
NCSTN-210ENST00000465223 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
NCSTN-210ENST00000465223 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
NCSTN-210ENST00000465223 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
NCSTN-210ENST00000465223 NESP48681 1621 aa31.22■■■□□ 2.59
NCSTN-210ENST00000465223 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
NCSTN-210ENST00000465223 THOC2Q8NI27 1593 aaKnown RBP31.06■■■□□ 2.56
NCSTN-210ENST00000465223 HMGXB3Q12766 1538 aa30.95■■■□□ 2.55
NCSTN-210ENST00000465223 SMARCA2P51531 1590 aa30.9■■■□□ 2.54
NCSTN-210ENST00000465223 SMARCA4P51532 1647 aa30.82■■■□□ 2.52
NCSTN-210ENST00000465223 KIF21AQ7Z4S6 1674 aa30.78■■■□□ 2.52
NCSTN-210ENST00000465223 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
NCSTN-210ENST00000465223 BAZ1BQ9UIG0 1483 aaKnown RBP30.72■■■□□ 2.51
NCSTN-210ENST00000465223 PDS5BQ9NTI5 1447 aa30.57■■■□□ 2.48
NCSTN-210ENST00000465223 BAZ1AQ9NRL2 1556 aaPredicted RBP30.47■■■□□ 2.47
NCSTN-210ENST00000465223 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
NCSTN-210ENST00000465223 MRC2Q9UBG0 1479 aa30.41■■■□□ 2.46
NCSTN-210ENST00000465223 WDR62O43379 1518 aa30.37■■■□□ 2.45
NCSTN-210ENST00000465223 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
NCSTN-210ENST00000465223 OSCARQ8IYS5 282 aa30.29■■■□□ 2.44
NCSTN-210ENST00000465223 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
NCSTN-210ENST00000465223 CEP164Q9UPV0 1460 aa30.08■■■□□ 2.41
NCSTN-210ENST00000465223 RIMBP3CA6NJZ7 1639 aa30.07■■■□□ 2.4
NCSTN-210ENST00000465223 RIMBP3BA6NNM3 1639 aa30.07■■■□□ 2.4
NCSTN-210ENST00000465223 RIMBP3Q9UFD9 1639 aa30.07■■■□□ 2.4
NCSTN-210ENST00000465223 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
NCSTN-210ENST00000465223 WIZO95785 1651 aa29.87■■■□□ 2.37
NCSTN-210ENST00000465223 ARHGEF11O15085 1522 aa29.84■■■□□ 2.37
NCSTN-210ENST00000465223 URB2Q14146 1524 aaKnown RBP29.83■■■□□ 2.37
NCSTN-210ENST00000465223 CFTRP13569 1480 aa29.74■■■□□ 2.35
NCSTN-210ENST00000465223 CYB5RLQ6IPT4 315 aa29.71■■■□□ 2.35
NCSTN-210ENST00000465223 TRHP20396 242 aaPredicted RBP29.7■■■□□ 2.35
NCSTN-210ENST00000465223 ZNF608Q9ULD9 1512 aaPredicted RBP29.64■■■□□ 2.34
NCSTN-210ENST00000465223 AEBP2Q6ZN18 517 aaPredicted RBP29.53■■■□□ 2.32
NCSTN-210ENST00000465223 IFT140Q96RY7 1462 aa29.51■■■□□ 2.31
NCSTN-210ENST00000465223 ARAP1Q96P48 1450 aa29.5■■■□□ 2.31
NCSTN-210ENST00000465223 CHD1O14646 1710 aa29.41■■■□□ 2.3
NCSTN-210ENST00000465223 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
NCSTN-210ENST00000465223 EIF4G3O43432 1585 aaKnown RBP29.4■■■□□ 2.3
NCSTN-210ENST00000465223 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
NCSTN-210ENST00000465223 TOPBP1Q92547 1522 aa29.31■■■□□ 2.28
NCSTN-210ENST00000465223 FBLN2P98095 1184 aa29.25■■■□□ 2.27
NCSTN-210ENST00000465223 RSF1Q96T23 1441 aaPredicted RBP29.25■■■□□ 2.27
NCSTN-210ENST00000465223 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.27
NCSTN-210ENST00000465223 TARBP1Q13395 1621 aaKnown RBP29.13■■■□□ 2.25
NCSTN-210ENST00000465223 DNMBPQ6XZF7 1577 aa29.1■■■□□ 2.25
NCSTN-210ENST00000465223 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
NCSTN-210ENST00000465223 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
NCSTN-210ENST00000465223 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
NCSTN-210ENST00000465223 POLA1P09884 1462 aaPredicted RBP28.94■■■□□ 2.22
NCSTN-210ENST00000465223 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
NCSTN-210ENST00000465223 TDRD9Q8NDG6 1382 aaKnown RBP28.9■■■□□ 2.22
NCSTN-210ENST00000465223 SNAPC4Q5SXM2 1469 aa28.9■■■□□ 2.22
NCSTN-210ENST00000465223 SYNJ1O43426 1573 aa28.86■■■□□ 2.21
NCSTN-210ENST00000465223 CHMP7Q8WUX9 453 aaPredicted RBP28.82■■■□□ 2.2
NCSTN-210ENST00000465223 SOGA1O94964 1423 aa28.78■■■□□ 2.2
NCSTN-210ENST00000465223 GAPVD1Q14C86 1478 aa28.76■■■□□ 2.19
NCSTN-210ENST00000465223 MAGI1Q96QZ7 1491 aaPredicted RBP28.72■■■□□ 2.19
NCSTN-210ENST00000465223 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
NCSTN-210ENST00000465223 SYNJ2O15056 1496 aa28.65■■■□□ 2.18
NCSTN-210ENST00000465223 FGD5Q6ZNL6 1462 aa28.64■■■□□ 2.17
NCSTN-210ENST00000465223 GRIN2BQ13224 1484 aa28.63■■■□□ 2.17
NCSTN-210ENST00000465223 ERCC6L2Q5T890 1561 aa28.55■■■□□ 2.16
NCSTN-210ENST00000465223 PBRM1Q86U86 1689 aa28.52■■■□□ 2.16
NCSTN-210ENST00000465223 CUX1P39880 1505 aa28.47■■■□□ 2.15
NCSTN-210ENST00000465223 KIF13AQ9H1H9 1805 aa28.46■■■□□ 2.15
NCSTN-210ENST00000465223 ILDR1Q86SU0 546 aaPredicted RBP28.42■■■□□ 2.14
NCSTN-210ENST00000465223 CEP170Q5SW79 1584 aa28.35■■■□□ 2.13
NCSTN-210ENST00000465223 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
NCSTN-210ENST00000465223 GRIN2AQ12879 1464 aa28.27■■■□□ 2.12
NCSTN-210ENST00000465223 KDM4FA0A1W2PPD8 638 aa28.25■■■□□ 2.11
NCSTN-210ENST00000465223 SHROOM2Q13796 1616 aa28.22■■■□□ 2.11
NCSTN-210ENST00000465223 ABCA10Q8WWZ4 1543 aa28.22■■■□□ 2.11
NCSTN-210ENST00000465223 NUP160Q12769 1436 aa28.21■■■□□ 2.11
NCSTN-210ENST00000465223 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
NCSTN-210ENST00000465223 FAM69CQ0P6D2 419 aa28.15■■■□□ 2.1
NCSTN-210ENST00000465223 ABCC10Q5T3U5 1492 aa28.1■■■□□ 2.09
NCSTN-210ENST00000465223 KDM6BO15054 1643 aa28.06■■■□□ 2.08
NCSTN-210ENST00000465223 PRG4Q92954 1404 aaPredicted RBP28.04■■■□□ 2.08
NCSTN-210ENST00000465223 DIP2BQ9P265 1576 aa28.03■■■□□ 2.08
NCSTN-210ENST00000465223 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms