RNA–Protein interactions for RNA: ENST00000465189.1

NSMCE4A-205, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE4A, Length 440 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-205ENST00000465189 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
NSMCE4A-205ENST00000465189 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
NSMCE4A-205ENST00000465189 ABCC9O60706 1549 aa37.8■■■■□ 3.64
NSMCE4A-205ENST00000465189 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
NSMCE4A-205ENST00000465189 NACADO15069 1562 aa36.01■■■■□ 3.35
NSMCE4A-205ENST00000465189 DCAF8L2P0C7V8 631 aa35.68■■■■□ 3.3
NSMCE4A-205ENST00000465189 MYO15BQ96JP2 1530 aa35.63■■■■□ 3.29
NSMCE4A-205ENST00000465189 ZCCHC6Q5VYS8 1495 aaKnown RBP35.32■■■■□ 3.24
NSMCE4A-205ENST00000465189 UNC13AQ9UPW8 1703 aa35.26■■■■□ 3.23
NSMCE4A-205ENST00000465189 DCAF1Q9Y4B6 1507 aa35.23■■■■□ 3.23
NSMCE4A-205ENST00000465189 PABPN1Q86U42 306 aaKnown RBP eCLIP35.16■■■■□ 3.22
NSMCE4A-205ENST00000465189 DNAJC5BQ9UF47 199 aa35.15■■■■□ 3.22
NSMCE4A-205ENST00000465189 BICRAQ9NZM4 1560 aa35.04■■■■□ 3.2
NSMCE4A-205ENST00000465189 SHROOM4Q9ULL8 1493 aa34.8■■■■□ 3.16
NSMCE4A-205ENST00000465189 SCRIBQ14160 1630 aa34.67■■■■□ 3.14
NSMCE4A-205ENST00000465189 EIF4G1Q04637 1599 aaKnown RBP34.2■■■■□ 3.07
NSMCE4A-205ENST00000465189 CC2D2AQ9P2K1 1620 aa34.2■■■■□ 3.07
NSMCE4A-205ENST00000465189 CECR2Q9BXF3 1484 aa34.08■■■■□ 3.05
NSMCE4A-205ENST00000465189 NCAPD3P42695 1498 aa33.2■■■□□ 2.91
NSMCE4A-205ENST00000465189 SMARCA4P51532 1647 aa33.13■■■□□ 2.89
NSMCE4A-205ENST00000465189 ATAD2BQ9ULI0 1458 aa33.11■■■□□ 2.89
NSMCE4A-205ENST00000465189 SMARCA2P51531 1590 aa33.09■■■□□ 2.89
NSMCE4A-205ENST00000465189 BAZ1AQ9NRL2 1556 aaPredicted RBP33.05■■■□□ 2.88
NSMCE4A-205ENST00000465189 HMGXB3Q12766 1538 aa33.02■■■□□ 2.88
NSMCE4A-205ENST00000465189 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
NSMCE4A-205ENST00000465189 BAZ1BQ9UIG0 1483 aaKnown RBP32.82■■■□□ 2.84
NSMCE4A-205ENST00000465189 MROH2BQ7Z745 1585 aa32.71■■■□□ 2.83
NSMCE4A-205ENST00000465189 ERCC6Q03468 1493 aa32.7■■■□□ 2.83
NSMCE4A-205ENST00000465189 CUX2O14529 1486 aa32.61■■■□□ 2.81
NSMCE4A-205ENST00000465189 NESP48681 1621 aa32.5■■■□□ 2.79
NSMCE4A-205ENST00000465189 LAMC3Q9Y6N6 1575 aa32.45■■■□□ 2.79
NSMCE4A-205ENST00000465189 WIZO95785 1651 aa32.33■■■□□ 2.77
NSMCE4A-205ENST00000465189 PDS5BQ9NTI5 1447 aa32.26■■■□□ 2.76
NSMCE4A-205ENST00000465189 DNAJC5Q9H3Z4 198 aa32.25■■■□□ 2.75
NSMCE4A-205ENST00000465189 THOC2Q8NI27 1593 aaKnown RBP32.22■■■□□ 2.75
NSMCE4A-205ENST00000465189 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
NSMCE4A-205ENST00000465189 KIF21AQ7Z4S6 1674 aa32.14■■■□□ 2.74
NSMCE4A-205ENST00000465189 RSF1Q96T23 1441 aaPredicted RBP32.13■■■□□ 2.73
NSMCE4A-205ENST00000465189 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
NSMCE4A-205ENST00000465189 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
NSMCE4A-205ENST00000465189 CFTRP13569 1480 aa31.88■■■□□ 2.69
NSMCE4A-205ENST00000465189 CEP164Q9UPV0 1460 aa31.87■■■□□ 2.69
NSMCE4A-205ENST00000465189 WDR62O43379 1518 aa31.86■■■□□ 2.69
NSMCE4A-205ENST00000465189 FANCD2Q9BXW9 1451 aa31.82■■■□□ 2.68
NSMCE4A-205ENST00000465189 PRDM2Q13029 1718 aa31.61■■■□□ 2.65
NSMCE4A-205ENST00000465189 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
NSMCE4A-205ENST00000465189 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.63
NSMCE4A-205ENST00000465189 ABCC8Q09428 1581 aa31.28■■■□□ 2.6
NSMCE4A-205ENST00000465189 TOPBP1Q92547 1522 aa31.24■■■□□ 2.59
NSMCE4A-205ENST00000465189 IFT140Q96RY7 1462 aa31.23■■■□□ 2.59
NSMCE4A-205ENST00000465189 DNMBPQ6XZF7 1577 aa31.17■■■□□ 2.58
NSMCE4A-205ENST00000465189 OSCARQ8IYS5 282 aa31.09■■■□□ 2.57
NSMCE4A-205ENST00000465189 ZNF608Q9ULD9 1512 aaPredicted RBP31.06■■■□□ 2.56
NSMCE4A-205ENST00000465189 EIF4G3O43432 1585 aaKnown RBP30.97■■■□□ 2.55
NSMCE4A-205ENST00000465189 TARBP1Q13395 1621 aaKnown RBP30.93■■■□□ 2.54
NSMCE4A-205ENST00000465189 POLA1P09884 1462 aaPredicted RBP30.93■■■□□ 2.54
NSMCE4A-205ENST00000465189 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
NSMCE4A-205ENST00000465189 AQRO60306 1485 aaKnown RBP eCLIP30.8■■■□□ 2.52
NSMCE4A-205ENST00000465189 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
NSMCE4A-205ENST00000465189 SOGA1O94964 1423 aa30.79■■■□□ 2.52
NSMCE4A-205ENST00000465189 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
NSMCE4A-205ENST00000465189 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.51
NSMCE4A-205ENST00000465189 RAD54L2Q9Y4B4 1467 aa30.75■■■□□ 2.51
NSMCE4A-205ENST00000465189 CUX1P39880 1505 aa30.74■■■□□ 2.51
NSMCE4A-205ENST00000465189 CHD1O14646 1710 aa30.66■■■□□ 2.5
NSMCE4A-205ENST00000465189 RIMBP3CA6NJZ7 1639 aa30.65■■■□□ 2.5
NSMCE4A-205ENST00000465189 RIMBP3BA6NNM3 1639 aa30.65■■■□□ 2.5
NSMCE4A-205ENST00000465189 RIMBP3Q9UFD9 1639 aa30.65■■■□□ 2.5
NSMCE4A-205ENST00000465189 TDRD9Q8NDG6 1382 aaKnown RBP30.65■■■□□ 2.5
NSMCE4A-205ENST00000465189 ARHGEF11O15085 1522 aa30.59■■■□□ 2.49
NSMCE4A-205ENST00000465189 FBLN2P98095 1184 aa30.55■■■□□ 2.48
NSMCE4A-205ENST00000465189 SNAPC4Q5SXM2 1469 aa30.55■■■□□ 2.48
NSMCE4A-205ENST00000465189 MAGI1Q96QZ7 1491 aaPredicted RBP30.55■■■□□ 2.48
NSMCE4A-205ENST00000465189 GRIN2BQ13224 1484 aa30.54■■■□□ 2.48
NSMCE4A-205ENST00000465189 ABCA10Q8WWZ4 1543 aa30.47■■■□□ 2.47
NSMCE4A-205ENST00000465189 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
NSMCE4A-205ENST00000465189 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
NSMCE4A-205ENST00000465189 SYNJ2O15056 1496 aa30.42■■■□□ 2.46
NSMCE4A-205ENST00000465189 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
NSMCE4A-205ENST00000465189 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
NSMCE4A-205ENST00000465189 ABCA5Q8WWZ7 1642 aa30.39■■■□□ 2.46
NSMCE4A-205ENST00000465189 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.45
NSMCE4A-205ENST00000465189 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
NSMCE4A-205ENST00000465189 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
NSMCE4A-205ENST00000465189 CLASP1Q7Z460 1538 aa30.36■■■□□ 2.45
NSMCE4A-205ENST00000465189 CYB5RLQ6IPT4 315 aa30.29■■■□□ 2.44
NSMCE4A-205ENST00000465189 ARAP1Q96P48 1450 aa30.29■■■□□ 2.44
NSMCE4A-205ENST00000465189 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
NSMCE4A-205ENST00000465189 GRIN2AQ12879 1464 aa30.13■■■□□ 2.41
NSMCE4A-205ENST00000465189 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
NSMCE4A-205ENST00000465189 FHAD1B1AJZ9 1412 aa30.08■■■□□ 2.41
NSMCE4A-205ENST00000465189 NUP160Q12769 1436 aa30.03■■■□□ 2.4
NSMCE4A-205ENST00000465189 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
NSMCE4A-205ENST00000465189 TRHP20396 242 aaPredicted RBP29.9■■■□□ 2.38
NSMCE4A-205ENST00000465189 SHROOM2Q13796 1616 aa29.87■■■□□ 2.37
NSMCE4A-205ENST00000465189 ERCC6L2Q5T890 1561 aa29.8■■■□□ 2.36
NSMCE4A-205ENST00000465189 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
NSMCE4A-205ENST00000465189 CUL7Q14999 1698 aa29.73■■■□□ 2.35
NSMCE4A-205ENST00000465189 RUSC2Q8N2Y8 1516 aa29.72■■■□□ 2.35
NSMCE4A-205ENST00000465189 IGF1RP08069 1367 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms