RNA–Protein interactions for RNA: ENST00000465141.1

LIN7B-203, Transcript of lin-7 homolog B, crumbs cell polarity complex component, humanhuman

TSL 3

Gene LIN7B, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7B-203ENST00000465141 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
LIN7B-203ENST00000465141 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
LIN7B-203ENST00000465141 ABCC9O60706 1549 aa29.2■■■□□ 2.27
LIN7B-203ENST00000465141 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
LIN7B-203ENST00000465141 RB1CC1Q8TDY2 1594 aa28.02■■■□□ 2.08
LIN7B-203ENST00000465141 NACADO15069 1562 aa28.01■■■□□ 2.07
LIN7B-203ENST00000465141 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
LIN7B-203ENST00000465141 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
LIN7B-203ENST00000465141 DCAF1Q9Y4B6 1507 aa27.73■■■□□ 2.03
LIN7B-203ENST00000465141 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
LIN7B-203ENST00000465141 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
LIN7B-203ENST00000465141 BICRAQ9NZM4 1560 aa27.23■■□□□ 1.95
LIN7B-203ENST00000465141 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
LIN7B-203ENST00000465141 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
LIN7B-203ENST00000465141 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
LIN7B-203ENST00000465141 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
LIN7B-203ENST00000465141 CC2D2AQ9P2K1 1620 aa26.38■■□□□ 1.81
LIN7B-203ENST00000465141 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
LIN7B-203ENST00000465141 SMARCA4P51532 1647 aa25.98■■□□□ 1.75
LIN7B-203ENST00000465141 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.74
LIN7B-203ENST00000465141 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
LIN7B-203ENST00000465141 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
LIN7B-203ENST00000465141 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
LIN7B-203ENST00000465141 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
LIN7B-203ENST00000465141 PEG3Q9GZU2 1588 aa25.76■■□□□ 1.71
LIN7B-203ENST00000465141 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
LIN7B-203ENST00000465141 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
LIN7B-203ENST00000465141 RSF1Q96T23 1441 aaPredicted RBP25.59■■□□□ 1.69
LIN7B-203ENST00000465141 WIZO95785 1651 aa25.52■■□□□ 1.68
LIN7B-203ENST00000465141 NESP48681 1621 aa25.28■■□□□ 1.64
LIN7B-203ENST00000465141 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
LIN7B-203ENST00000465141 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
LIN7B-203ENST00000465141 LAMC3Q9Y6N6 1575 aa25.14■■□□□ 1.62
LIN7B-203ENST00000465141 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
LIN7B-203ENST00000465141 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
LIN7B-203ENST00000465141 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
LIN7B-203ENST00000465141 CFTRP13569 1480 aa25■■□□□ 1.59
LIN7B-203ENST00000465141 CUX2O14529 1486 aa24.9■■□□□ 1.58
LIN7B-203ENST00000465141 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
LIN7B-203ENST00000465141 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
LIN7B-203ENST00000465141 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
LIN7B-203ENST00000465141 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
LIN7B-203ENST00000465141 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
LIN7B-203ENST00000465141 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
LIN7B-203ENST00000465141 WDR62O43379 1518 aa24.68■■□□□ 1.54
LIN7B-203ENST00000465141 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
LIN7B-203ENST00000465141 PRDM2Q13029 1718 aa24.59■■□□□ 1.53
LIN7B-203ENST00000465141 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
LIN7B-203ENST00000465141 ABCC8Q09428 1581 aa24.39■■□□□ 1.5
LIN7B-203ENST00000465141 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
LIN7B-203ENST00000465141 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
LIN7B-203ENST00000465141 DNAJC5Q9H3Z4 198 aa24.25■■□□□ 1.47
LIN7B-203ENST00000465141 CUX1P39880 1505 aa24.25■■□□□ 1.47
LIN7B-203ENST00000465141 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
LIN7B-203ENST00000465141 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
LIN7B-203ENST00000465141 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
LIN7B-203ENST00000465141 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
LIN7B-203ENST00000465141 SOGA1O94964 1423 aa24.15■■□□□ 1.46
LIN7B-203ENST00000465141 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.46
LIN7B-203ENST00000465141 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.44
LIN7B-203ENST00000465141 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.44
LIN7B-203ENST00000465141 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
LIN7B-203ENST00000465141 EIF4G3O43432 1585 aaKnown RBP24.02■■□□□ 1.44
LIN7B-203ENST00000465141 SYNJ1O43426 1573 aa24■■□□□ 1.43
LIN7B-203ENST00000465141 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
LIN7B-203ENST00000465141 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.43
LIN7B-203ENST00000465141 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
LIN7B-203ENST00000465141 OSCARQ8IYS5 282 aa23.92■■□□□ 1.42
LIN7B-203ENST00000465141 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
LIN7B-203ENST00000465141 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
LIN7B-203ENST00000465141 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
LIN7B-203ENST00000465141 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
LIN7B-203ENST00000465141 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
LIN7B-203ENST00000465141 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
LIN7B-203ENST00000465141 FBLN2P98095 1184 aa23.76■■□□□ 1.39
LIN7B-203ENST00000465141 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
LIN7B-203ENST00000465141 SYNJ2O15056 1496 aa23.69■■□□□ 1.38
LIN7B-203ENST00000465141 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
LIN7B-203ENST00000465141 CHD1O14646 1710 aa23.67■■□□□ 1.38
LIN7B-203ENST00000465141 ERICH3Q5RHP9 1530 aa23.62■■□□□ 1.37
LIN7B-203ENST00000465141 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.36
LIN7B-203ENST00000465141 KIF27Q86VH2 1401 aa23.58■■□□□ 1.36
LIN7B-203ENST00000465141 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
LIN7B-203ENST00000465141 IGF1RP08069 1367 aa23.55■■□□□ 1.36
LIN7B-203ENST00000465141 GRIN2AQ12879 1464 aa23.53■■□□□ 1.36
LIN7B-203ENST00000465141 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
LIN7B-203ENST00000465141 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
LIN7B-203ENST00000465141 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
LIN7B-203ENST00000465141 NUP160Q12769 1436 aa23.46■■□□□ 1.35
LIN7B-203ENST00000465141 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
LIN7B-203ENST00000465141 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
LIN7B-203ENST00000465141 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
LIN7B-203ENST00000465141 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
LIN7B-203ENST00000465141 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
LIN7B-203ENST00000465141 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
LIN7B-203ENST00000465141 CUL7Q14999 1698 aa23.33■■□□□ 1.33
LIN7B-203ENST00000465141 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
LIN7B-203ENST00000465141 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
LIN7B-203ENST00000465141 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
LIN7B-203ENST00000465141 JPH4Q96JJ6 628 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms