RNA–Protein interactions for RNA: ENST00000465135.1

C1orf56-202, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-202ENST00000465135 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
C1orf56-202ENST00000465135 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.28
C1orf56-202ENST00000465135 ABCC9O60706 1549 aa22.75■■□□□ 1.23
C1orf56-202ENST00000465135 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
C1orf56-202ENST00000465135 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
C1orf56-202ENST00000465135 NACADO15069 1562 aa21.7■■□□□ 1.06
C1orf56-202ENST00000465135 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
C1orf56-202ENST00000465135 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
C1orf56-202ENST00000465135 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.02
C1orf56-202ENST00000465135 UNC13AQ9UPW8 1703 aa21.37■■□□□ 1.01
C1orf56-202ENST00000465135 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
C1orf56-202ENST00000465135 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
C1orf56-202ENST00000465135 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
C1orf56-202ENST00000465135 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
C1orf56-202ENST00000465135 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
C1orf56-202ENST00000465135 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
C1orf56-202ENST00000465135 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
C1orf56-202ENST00000465135 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
C1orf56-202ENST00000465135 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
C1orf56-202ENST00000465135 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
C1orf56-202ENST00000465135 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
C1orf56-202ENST00000465135 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
C1orf56-202ENST00000465135 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
C1orf56-202ENST00000465135 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
C1orf56-202ENST00000465135 SMARCA2P51531 1590 aa20■□□□□ 0.79
C1orf56-202ENST00000465135 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
C1orf56-202ENST00000465135 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
C1orf56-202ENST00000465135 BAZ1BQ9UIG0 1483 aaKnown RBP19.9■□□□□ 0.78
C1orf56-202ENST00000465135 WIZO95785 1651 aa19.85■□□□□ 0.77
C1orf56-202ENST00000465135 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
C1orf56-202ENST00000465135 NESP48681 1621 aa19.69■□□□□ 0.74
C1orf56-202ENST00000465135 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
C1orf56-202ENST00000465135 ERCC6Q03468 1493 aa19.57■□□□□ 0.72
C1orf56-202ENST00000465135 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
C1orf56-202ENST00000465135 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
C1orf56-202ENST00000465135 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
C1orf56-202ENST00000465135 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
C1orf56-202ENST00000465135 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
C1orf56-202ENST00000465135 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
C1orf56-202ENST00000465135 CUX2O14529 1486 aa19.34■□□□□ 0.69
C1orf56-202ENST00000465135 CFTRP13569 1480 aa19.32■□□□□ 0.68
C1orf56-202ENST00000465135 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.67
C1orf56-202ENST00000465135 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
C1orf56-202ENST00000465135 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
C1orf56-202ENST00000465135 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
C1orf56-202ENST00000465135 PRDM2Q13029 1718 aa19.21■□□□□ 0.67
C1orf56-202ENST00000465135 WDR62O43379 1518 aa19.15■□□□□ 0.66
C1orf56-202ENST00000465135 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
C1orf56-202ENST00000465135 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
C1orf56-202ENST00000465135 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
C1orf56-202ENST00000465135 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
C1orf56-202ENST00000465135 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
C1orf56-202ENST00000465135 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
C1orf56-202ENST00000465135 ZNF608Q9ULD9 1512 aaPredicted RBP18.82■□□□□ 0.6
C1orf56-202ENST00000465135 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
C1orf56-202ENST00000465135 CUX1P39880 1505 aa18.8■□□□□ 0.6
C1orf56-202ENST00000465135 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
C1orf56-202ENST00000465135 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
C1orf56-202ENST00000465135 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
C1orf56-202ENST00000465135 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
C1orf56-202ENST00000465135 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
C1orf56-202ENST00000465135 SOGA1O94964 1423 aa18.69■□□□□ 0.58
C1orf56-202ENST00000465135 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.58
C1orf56-202ENST00000465135 TDRD9Q8NDG6 1382 aaKnown RBP18.64■□□□□ 0.57
C1orf56-202ENST00000465135 SYNJ1O43426 1573 aa18.64■□□□□ 0.57
C1orf56-202ENST00000465135 WRNQ14191 1432 aaPredicted RBP eCLIP18.61■□□□□ 0.57
C1orf56-202ENST00000465135 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
C1orf56-202ENST00000465135 TOP2BQ02880 1626 aa18.59■□□□□ 0.57
C1orf56-202ENST00000465135 BIVM-ERCC5R4GMW8 1640 aa18.59■□□□□ 0.57
C1orf56-202ENST00000465135 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
C1orf56-202ENST00000465135 CHD1O14646 1710 aa18.52■□□□□ 0.56
C1orf56-202ENST00000465135 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
C1orf56-202ENST00000465135 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
C1orf56-202ENST00000465135 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
C1orf56-202ENST00000465135 FBLN2P98095 1184 aa18.48■□□□□ 0.55
C1orf56-202ENST00000465135 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
C1orf56-202ENST00000465135 GAPVD1Q14C86 1478 aa18.47■□□□□ 0.55
C1orf56-202ENST00000465135 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
C1orf56-202ENST00000465135 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
C1orf56-202ENST00000465135 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
C1orf56-202ENST00000465135 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
C1orf56-202ENST00000465135 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
C1orf56-202ENST00000465135 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
C1orf56-202ENST00000465135 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
C1orf56-202ENST00000465135 ADAMTS12P58397 1594 aa18.32■□□□□ 0.52
C1orf56-202ENST00000465135 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
C1orf56-202ENST00000465135 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
C1orf56-202ENST00000465135 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
C1orf56-202ENST00000465135 CLASP1Q7Z460 1538 aa18.27■□□□□ 0.51
C1orf56-202ENST00000465135 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
C1orf56-202ENST00000465135 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
C1orf56-202ENST00000465135 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
C1orf56-202ENST00000465135 CEP170Q5SW79 1584 aa18.2■□□□□ 0.5
C1orf56-202ENST00000465135 IGF1RP08069 1367 aa18.17■□□□□ 0.5
C1orf56-202ENST00000465135 NUP160Q12769 1436 aa18.15■□□□□ 0.5
C1orf56-202ENST00000465135 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
C1orf56-202ENST00000465135 CYB5RLQ6IPT4 315 aa18.13■□□□□ 0.49
C1orf56-202ENST00000465135 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
C1orf56-202ENST00000465135 CUL7Q14999 1698 aa18.11■□□□□ 0.49
C1orf56-202ENST00000465135 ERCC6L2Q5T890 1561 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms