RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 NISCHQ9Y2I1 1504 aa40.41■■■■■ 4.06
SNX12-203ENST00000465030 ABCC9O60706 1549 aa38.19■■■■□ 3.7
SNX12-203ENST00000465030 DNAJC5BQ9UF47 199 aa37.06■■■■□ 3.52
SNX12-203ENST00000465030 CCDC180Q9P1Z9 1646 aa36.82■■■■□ 3.49
SNX12-203ENST00000465030 RB1CC1Q8TDY2 1594 aa35.73■■■■□ 3.31
SNX12-203ENST00000465030 PABPN1Q86U42 306 aaKnown RBP eCLIP35.34■■■■□ 3.25
SNX12-203ENST00000465030 NACADO15069 1562 aa35.17■■■■□ 3.22
SNX12-203ENST00000465030 DNAJC5Q9H3Z4 198 aa35.04■■■■□ 3.2
SNX12-203ENST00000465030 UNC13AQ9UPW8 1703 aa34.84■■■■□ 3.17
SNX12-203ENST00000465030 BICRAQ9NZM4 1560 aa34.76■■■■□ 3.16
SNX12-203ENST00000465030 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
SNX12-203ENST00000465030 CECR2Q9BXF3 1484 aa34.57■■■■□ 3.12
SNX12-203ENST00000465030 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
SNX12-203ENST00000465030 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.08
SNX12-203ENST00000465030 SHROOM4Q9ULL8 1493 aa34.2■■■■□ 3.06
SNX12-203ENST00000465030 EIF4G1Q04637 1599 aaKnown RBP34.02■■■■□ 3.04
SNX12-203ENST00000465030 CUX2O14529 1486 aa33.5■■■□□ 2.95
SNX12-203ENST00000465030 SCRIBQ14160 1630 aa33.48■■■□□ 2.95
SNX12-203ENST00000465030 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
SNX12-203ENST00000465030 ZCCHC6Q5VYS8 1495 aaKnown RBP33.22■■■□□ 2.91
SNX12-203ENST00000465030 ERCC6Q03468 1493 aa33.08■■■□□ 2.89
SNX12-203ENST00000465030 TRIM41Q8WV44 630 aa32.91■■■□□ 2.86
SNX12-203ENST00000465030 NCAPD3P42695 1498 aa32.51■■■□□ 2.79
SNX12-203ENST00000465030 NESP48681 1621 aa32.42■■■□□ 2.78
SNX12-203ENST00000465030 THOC2Q8NI27 1593 aaKnown RBP32.37■■■□□ 2.77
SNX12-203ENST00000465030 ATAD2BQ9ULI0 1458 aa32.22■■■□□ 2.75
SNX12-203ENST00000465030 HMGXB3Q12766 1538 aa32.13■■■□□ 2.73
SNX12-203ENST00000465030 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
SNX12-203ENST00000465030 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
SNX12-203ENST00000465030 KIF21AQ7Z4S6 1674 aa31.9■■■□□ 2.7
SNX12-203ENST00000465030 PDS5BQ9NTI5 1447 aa31.85■■■□□ 2.69
SNX12-203ENST00000465030 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
SNX12-203ENST00000465030 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
SNX12-203ENST00000465030 BAZ1AQ9NRL2 1556 aaPredicted RBP31.78■■■□□ 2.68
SNX12-203ENST00000465030 OSCARQ8IYS5 282 aa31.71■■■□□ 2.67
SNX12-203ENST00000465030 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
SNX12-203ENST00000465030 WDR62O43379 1518 aa31.64■■■□□ 2.66
SNX12-203ENST00000465030 PEG3Q9GZU2 1588 aa31.53■■■□□ 2.64
SNX12-203ENST00000465030 RIMBP3CA6NJZ7 1639 aa31.45■■■□□ 2.62
SNX12-203ENST00000465030 RIMBP3BA6NNM3 1639 aa31.45■■■□□ 2.62
SNX12-203ENST00000465030 RIMBP3Q9UFD9 1639 aa31.45■■■□□ 2.62
SNX12-203ENST00000465030 CADPSQ9ULU8 1353 aa31.44■■■□□ 2.62
SNX12-203ENST00000465030 AEBP2Q6ZN18 517 aaPredicted RBP31.26■■■□□ 2.59
SNX12-203ENST00000465030 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
SNX12-203ENST00000465030 ARHGEF11O15085 1522 aa31.24■■■□□ 2.59
SNX12-203ENST00000465030 TRHP20396 242 aaPredicted RBP31.16■■■□□ 2.58
SNX12-203ENST00000465030 MROH2BQ7Z745 1585 aa31.12■■■□□ 2.57
SNX12-203ENST00000465030 FANCD2Q9BXW9 1451 aa31.09■■■□□ 2.57
SNX12-203ENST00000465030 CYB5RLQ6IPT4 315 aa31.07■■■□□ 2.56
SNX12-203ENST00000465030 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
SNX12-203ENST00000465030 ARAP1Q96P48 1450 aa30.85■■■□□ 2.53
SNX12-203ENST00000465030 CFTRP13569 1480 aa30.81■■■□□ 2.52
SNX12-203ENST00000465030 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
SNX12-203ENST00000465030 IFT140Q96RY7 1462 aa30.69■■■□□ 2.5
SNX12-203ENST00000465030 WIZO95785 1651 aa30.64■■■□□ 2.5
SNX12-203ENST00000465030 RSF1Q96T23 1441 aaPredicted RBP30.61■■■□□ 2.49
SNX12-203ENST00000465030 EIF4G3O43432 1585 aaKnown RBP30.51■■■□□ 2.47
SNX12-203ENST00000465030 CHD1O14646 1710 aa30.49■■■□□ 2.47
SNX12-203ENST00000465030 FBLN2P98095 1184 aa30.36■■■□□ 2.45
SNX12-203ENST00000465030 TOPBP1Q92547 1522 aa30.35■■■□□ 2.45
SNX12-203ENST00000465030 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.44
SNX12-203ENST00000465030 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
SNX12-203ENST00000465030 TOP2AP11388 1531 aaKnown RBP30.2■■■□□ 2.42
SNX12-203ENST00000465030 CLASP1Q7Z460 1538 aa30.19■■■□□ 2.42
SNX12-203ENST00000465030 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
SNX12-203ENST00000465030 TARBP1Q13395 1621 aaKnown RBP30.17■■■□□ 2.42
SNX12-203ENST00000465030 ILDR1Q86SU0 546 aaPredicted RBP30.16■■■□□ 2.42
SNX12-203ENST00000465030 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
SNX12-203ENST00000465030 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
SNX12-203ENST00000465030 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
SNX12-203ENST00000465030 SNAPC4Q5SXM2 1469 aa29.97■■■□□ 2.39
SNX12-203ENST00000465030 POLA1P09884 1462 aaPredicted RBP29.96■■■□□ 2.39
SNX12-203ENST00000465030 CHMP7Q8WUX9 453 aaPredicted RBP29.92■■■□□ 2.38
SNX12-203ENST00000465030 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
SNX12-203ENST00000465030 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
SNX12-203ENST00000465030 RAD54L2Q9Y4B4 1467 aa29.87■■■□□ 2.37
SNX12-203ENST00000465030 MAGI1Q96QZ7 1491 aaPredicted RBP29.83■■■□□ 2.37
SNX12-203ENST00000465030 SOGA1O94964 1423 aa29.78■■■□□ 2.36
SNX12-203ENST00000465030 WDR97A6NE52 1622 aa29.78■■■□□ 2.36
SNX12-203ENST00000465030 SYNJ2O15056 1496 aa29.76■■■□□ 2.35
SNX12-203ENST00000465030 GRIN2BQ13224 1484 aa29.69■■■□□ 2.34
SNX12-203ENST00000465030 KDM4FA0A1W2PPD8 638 aa29.66■■■□□ 2.34
SNX12-203ENST00000465030 KIF13AQ9H1H9 1805 aa29.6■■■□□ 2.33
SNX12-203ENST00000465030 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
SNX12-203ENST00000465030 FGD5Q6ZNL6 1462 aa29.56■■■□□ 2.32
SNX12-203ENST00000465030 CEP170Q5SW79 1584 aa29.42■■■□□ 2.3
SNX12-203ENST00000465030 PBRM1Q86U86 1689 aa29.41■■■□□ 2.3
SNX12-203ENST00000465030 FAM69CQ0P6D2 419 aa29.36■■■□□ 2.29
SNX12-203ENST00000465030 ABCC10Q5T3U5 1492 aa29.35■■■□□ 2.29
SNX12-203ENST00000465030 CUX1P39880 1505 aa29.32■■■□□ 2.28
SNX12-203ENST00000465030 GRIN2AQ12879 1464 aa29.31■■■□□ 2.28
SNX12-203ENST00000465030 KDM6BO15054 1643 aa29.31■■■□□ 2.28
SNX12-203ENST00000465030 NUP160Q12769 1436 aa29.28■■■□□ 2.28
SNX12-203ENST00000465030 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
SNX12-203ENST00000465030 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
SNX12-203ENST00000465030 DIP2BQ9P265 1576 aa29.22■■■□□ 2.27
SNX12-203ENST00000465030 MAPKBP1O60336 1514 aa29.18■■■□□ 2.26
SNX12-203ENST00000465030 ABCA10Q8WWZ4 1543 aa29.16■■■□□ 2.26
SNX12-203ENST00000465030 HECW2Q9P2P5 1572 aa29.13■■■□□ 2.25
SNX12-203ENST00000465030 ADAMTS12P58397 1594 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms