RNA–Protein interactions for RNA: ENST00000464953.2

LPIN1-213, Transcript of lipin 1, humanhuman

TSL 3

Gene LPIN1, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-213ENST00000464953 NISCHQ9Y2I1 1504 aa37.86■■■■□ 3.65
LPIN1-213ENST00000464953 CCDC180Q9P1Z9 1646 aa33.75■■■□□ 2.99
LPIN1-213ENST00000464953 ABCC9O60706 1549 aa33.47■■■□□ 2.95
LPIN1-213ENST00000464953 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
LPIN1-213ENST00000464953 NACADO15069 1562 aa31.84■■■□□ 2.69
LPIN1-213ENST00000464953 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
LPIN1-213ENST00000464953 MYO15BQ96JP2 1530 aa31.53■■■□□ 2.64
LPIN1-213ENST00000464953 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.62
LPIN1-213ENST00000464953 UNC13AQ9UPW8 1703 aa31.27■■■□□ 2.6
LPIN1-213ENST00000464953 DCAF1Q9Y4B6 1507 aa31.27■■■□□ 2.6
LPIN1-213ENST00000464953 PABPN1Q86U42 306 aaKnown RBP eCLIP31.25■■■□□ 2.59
LPIN1-213ENST00000464953 DNAJC5BQ9UF47 199 aa31.16■■■□□ 2.58
LPIN1-213ENST00000464953 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
LPIN1-213ENST00000464953 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
LPIN1-213ENST00000464953 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
LPIN1-213ENST00000464953 EIF4G1Q04637 1599 aaKnown RBP30.26■■■□□ 2.43
LPIN1-213ENST00000464953 CC2D2AQ9P2K1 1620 aa30.23■■■□□ 2.43
LPIN1-213ENST00000464953 CECR2Q9BXF3 1484 aa30.09■■■□□ 2.41
LPIN1-213ENST00000464953 NCAPD3P42695 1498 aa29.43■■■□□ 2.3
LPIN1-213ENST00000464953 SMARCA4P51532 1647 aa29.43■■■□□ 2.3
LPIN1-213ENST00000464953 ATAD2BQ9ULI0 1458 aa29.39■■■□□ 2.3
LPIN1-213ENST00000464953 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
LPIN1-213ENST00000464953 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
LPIN1-213ENST00000464953 HMGXB3Q12766 1538 aa29.2■■■□□ 2.27
LPIN1-213ENST00000464953 MROH2BQ7Z745 1585 aa29.2■■■□□ 2.26
LPIN1-213ENST00000464953 PEG3Q9GZU2 1588 aa29.15■■■□□ 2.26
LPIN1-213ENST00000464953 BAZ1BQ9UIG0 1483 aaKnown RBP29.09■■■□□ 2.25
LPIN1-213ENST00000464953 NESP48681 1621 aa28.88■■■□□ 2.21
LPIN1-213ENST00000464953 WIZO95785 1651 aa28.85■■■□□ 2.21
LPIN1-213ENST00000464953 ERCC6Q03468 1493 aa28.81■■■□□ 2.2
LPIN1-213ENST00000464953 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
LPIN1-213ENST00000464953 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
LPIN1-213ENST00000464953 CUX2O14529 1486 aa28.64■■■□□ 2.17
LPIN1-213ENST00000464953 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
LPIN1-213ENST00000464953 PDS5BQ9NTI5 1447 aa28.49■■■□□ 2.15
LPIN1-213ENST00000464953 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
LPIN1-213ENST00000464953 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
LPIN1-213ENST00000464953 KIF21AQ7Z4S6 1674 aa28.47■■■□□ 2.15
LPIN1-213ENST00000464953 CFTRP13569 1480 aa28.3■■■□□ 2.12
LPIN1-213ENST00000464953 DNAJC5Q9H3Z4 198 aa28.28■■■□□ 2.12
LPIN1-213ENST00000464953 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
LPIN1-213ENST00000464953 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
LPIN1-213ENST00000464953 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.1
LPIN1-213ENST00000464953 CEP164Q9UPV0 1460 aa28.18■■■□□ 2.1
LPIN1-213ENST00000464953 WDR62O43379 1518 aa28.16■■■□□ 2.1
LPIN1-213ENST00000464953 URB2Q14146 1524 aaKnown RBP27.98■■■□□ 2.07
LPIN1-213ENST00000464953 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
LPIN1-213ENST00000464953 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
LPIN1-213ENST00000464953 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
LPIN1-213ENST00000464953 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
LPIN1-213ENST00000464953 DNMBPQ6XZF7 1577 aa27.64■■■□□ 2.01
LPIN1-213ENST00000464953 IFT140Q96RY7 1462 aa27.62■■■□□ 2.01
LPIN1-213ENST00000464953 ZNF608Q9ULD9 1512 aaPredicted RBP27.6■■■□□ 2.01
LPIN1-213ENST00000464953 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
LPIN1-213ENST00000464953 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
LPIN1-213ENST00000464953 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
LPIN1-213ENST00000464953 EIF4G3O43432 1585 aaKnown RBP27.41■■□□□ 1.98
LPIN1-213ENST00000464953 CUX1P39880 1505 aa27.41■■□□□ 1.98
LPIN1-213ENST00000464953 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
LPIN1-213ENST00000464953 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.97
LPIN1-213ENST00000464953 FGD5Q6ZNL6 1462 aa27.35■■□□□ 1.97
LPIN1-213ENST00000464953 SOGA1O94964 1423 aa27.34■■□□□ 1.97
LPIN1-213ENST00000464953 TDRD9Q8NDG6 1382 aaKnown RBP27.27■■□□□ 1.96
LPIN1-213ENST00000464953 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
LPIN1-213ENST00000464953 CHD1O14646 1710 aa27.13■■□□□ 1.93
LPIN1-213ENST00000464953 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
LPIN1-213ENST00000464953 FBLN2P98095 1184 aa27.09■■□□□ 1.93
LPIN1-213ENST00000464953 SNAPC4Q5SXM2 1469 aa27.08■■□□□ 1.93
LPIN1-213ENST00000464953 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
LPIN1-213ENST00000464953 GRIN2BQ13224 1484 aa27.05■■□□□ 1.92
LPIN1-213ENST00000464953 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
LPIN1-213ENST00000464953 SYNJ1O43426 1573 aa27.04■■□□□ 1.92
LPIN1-213ENST00000464953 RIMBP3CA6NJZ7 1639 aa27.03■■□□□ 1.92
LPIN1-213ENST00000464953 RIMBP3BA6NNM3 1639 aa27.03■■□□□ 1.92
LPIN1-213ENST00000464953 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
LPIN1-213ENST00000464953 RIMBP3Q9UFD9 1639 aa27.03■■□□□ 1.92
LPIN1-213ENST00000464953 BIVM-ERCC5R4GMW8 1640 aa27.02■■□□□ 1.92
LPIN1-213ENST00000464953 GAPVD1Q14C86 1478 aa27.01■■□□□ 1.91
LPIN1-213ENST00000464953 MAGI1Q96QZ7 1491 aaPredicted RBP27■■□□□ 1.91
LPIN1-213ENST00000464953 ARHGEF11O15085 1522 aa26.99■■□□□ 1.91
LPIN1-213ENST00000464953 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
LPIN1-213ENST00000464953 PBRM1Q86U86 1689 aa26.95■■□□□ 1.91
LPIN1-213ENST00000464953 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
LPIN1-213ENST00000464953 SYNJ2O15056 1496 aa26.92■■□□□ 1.9
LPIN1-213ENST00000464953 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
LPIN1-213ENST00000464953 CYB5RLQ6IPT4 315 aa26.78■■□□□ 1.88
LPIN1-213ENST00000464953 ARAP1Q96P48 1450 aa26.76■■□□□ 1.87
LPIN1-213ENST00000464953 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
LPIN1-213ENST00000464953 GRIN2AQ12879 1464 aa26.71■■□□□ 1.87
LPIN1-213ENST00000464953 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.86
LPIN1-213ENST00000464953 FHAD1B1AJZ9 1412 aa26.68■■□□□ 1.86
LPIN1-213ENST00000464953 NUP160Q12769 1436 aa26.63■■□□□ 1.85
LPIN1-213ENST00000464953 CEP170Q5SW79 1584 aa26.62■■□□□ 1.85
LPIN1-213ENST00000464953 ERCC6L2Q5T890 1561 aa26.51■■□□□ 1.83
LPIN1-213ENST00000464953 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
LPIN1-213ENST00000464953 IGF1RP08069 1367 aa26.5■■□□□ 1.83
LPIN1-213ENST00000464953 SHROOM2Q13796 1616 aa26.46■■□□□ 1.83
LPIN1-213ENST00000464953 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
LPIN1-213ENST00000464953 RUSC2Q8N2Y8 1516 aa26.35■■□□□ 1.81
LPIN1-213ENST00000464953 CUL7Q14999 1698 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms