RNA–Protein interactions for RNA: ENST00000464828.1

SLC6A11-203, Transcript of solute carrier family 6 member 11, humanhuman

TSL 3

Gene SLC6A11, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11-203ENST00000464828 NISCHQ9Y2I1 1504 aa48.58■■■■■ 5.37
SLC6A11-203ENST00000464828 CCDC180Q9P1Z9 1646 aa43.42■■■■■ 4.54
SLC6A11-203ENST00000464828 ABCC9O60706 1549 aa42.73■■■■■ 4.43
SLC6A11-203ENST00000464828 RB1CC1Q8TDY2 1594 aa41.06■■■■■ 4.16
SLC6A11-203ENST00000464828 NACADO15069 1562 aa40.94■■■■■ 4.14
SLC6A11-203ENST00000464828 DCAF8L2P0C7V8 631 aa40.72■■■■■ 4.11
SLC6A11-203ENST00000464828 MYO15BQ96JP2 1530 aa40.62■■■■■ 4.09
SLC6A11-203ENST00000464828 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
SLC6A11-203ENST00000464828 DCAF1Q9Y4B6 1507 aa40.27■■■■■ 4.04
SLC6A11-203ENST00000464828 UNC13AQ9UPW8 1703 aa39.98■■■■□ 3.99
SLC6A11-203ENST00000464828 PABPN1Q86U42 306 aaKnown RBP eCLIP39.85■■■■□ 3.97
SLC6A11-203ENST00000464828 BICRAQ9NZM4 1560 aa39.72■■■■□ 3.95
SLC6A11-203ENST00000464828 DNAJC5BQ9UF47 199 aa39.5■■■■□ 3.91
SLC6A11-203ENST00000464828 SHROOM4Q9ULL8 1493 aa39.49■■■■□ 3.91
SLC6A11-203ENST00000464828 SCRIBQ14160 1630 aa39.47■■■■□ 3.91
SLC6A11-203ENST00000464828 EIF4G1Q04637 1599 aaKnown RBP38.75■■■■□ 3.79
SLC6A11-203ENST00000464828 CC2D2AQ9P2K1 1620 aa38.67■■■■□ 3.78
SLC6A11-203ENST00000464828 CECR2Q9BXF3 1484 aa38.5■■■■□ 3.75
SLC6A11-203ENST00000464828 SMARCA4P51532 1647 aa37.77■■■■□ 3.64
SLC6A11-203ENST00000464828 NCAPD3P42695 1498 aa37.76■■■■□ 3.63
SLC6A11-203ENST00000464828 BAZ1AQ9NRL2 1556 aaPredicted RBP37.74■■■■□ 3.63
SLC6A11-203ENST00000464828 SMARCA2P51531 1590 aa37.68■■■■□ 3.62
SLC6A11-203ENST00000464828 ATAD2BQ9ULI0 1458 aa37.67■■■■□ 3.62
SLC6A11-203ENST00000464828 HMGXB3Q12766 1538 aa37.54■■■■□ 3.6
SLC6A11-203ENST00000464828 PEG3Q9GZU2 1588 aa37.46■■■■□ 3.59
SLC6A11-203ENST00000464828 BAZ1BQ9UIG0 1483 aaKnown RBP37.37■■■■□ 3.57
SLC6A11-203ENST00000464828 MROH2BQ7Z745 1585 aa37.37■■■■□ 3.57
SLC6A11-203ENST00000464828 ERCC6Q03468 1493 aa36.96■■■■□ 3.51
SLC6A11-203ENST00000464828 WIZO95785 1651 aa36.93■■■■□ 3.5
SLC6A11-203ENST00000464828 RSF1Q96T23 1441 aaPredicted RBP36.85■■■■□ 3.49
SLC6A11-203ENST00000464828 LAMC3Q9Y6N6 1575 aa36.83■■■■□ 3.49
SLC6A11-203ENST00000464828 NESP48681 1621 aa36.83■■■■□ 3.49
SLC6A11-203ENST00000464828 CUX2O14529 1486 aa36.75■■■■□ 3.47
SLC6A11-203ENST00000464828 PDS5BQ9NTI5 1447 aa36.63■■■■□ 3.45
SLC6A11-203ENST00000464828 CADPSQ9ULU8 1353 aa36.63■■■■□ 3.45
SLC6A11-203ENST00000464828 TOP2AP11388 1531 aaKnown RBP36.6■■■■□ 3.45
SLC6A11-203ENST00000464828 KIF21AQ7Z4S6 1674 aa36.41■■■■□ 3.42
SLC6A11-203ENST00000464828 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
SLC6A11-203ENST00000464828 CFTRP13569 1480 aa36.32■■■■□ 3.41
SLC6A11-203ENST00000464828 MRC2Q9UBG0 1479 aa36.22■■■■□ 3.39
SLC6A11-203ENST00000464828 CEP164Q9UPV0 1460 aa36.2■■■■□ 3.39
SLC6A11-203ENST00000464828 FANCD2Q9BXW9 1451 aa36.18■■■■□ 3.38
SLC6A11-203ENST00000464828 CCDC88BA6NC98 1476 aa36.14■■■■□ 3.38
SLC6A11-203ENST00000464828 WDR62O43379 1518 aa36.1■■■■□ 3.37
SLC6A11-203ENST00000464828 DNAJC5Q9H3Z4 198 aa36.02■■■■□ 3.36
SLC6A11-203ENST00000464828 PRDM2Q13029 1718 aa36■■■■□ 3.35
SLC6A11-203ENST00000464828 URB2Q14146 1524 aaKnown RBP35.79■■■■□ 3.32
SLC6A11-203ENST00000464828 ABCC8Q09428 1581 aa35.65■■■■□ 3.3
SLC6A11-203ENST00000464828 SUPT5HO00267 1087 aaKnown RBP35.59■■■■□ 3.29
SLC6A11-203ENST00000464828 TOPBP1Q92547 1522 aa35.54■■■■□ 3.28
SLC6A11-203ENST00000464828 DNMBPQ6XZF7 1577 aa35.5■■■■□ 3.27
SLC6A11-203ENST00000464828 IFT140Q96RY7 1462 aa35.48■■■■□ 3.27
SLC6A11-203ENST00000464828 ZNF608Q9ULD9 1512 aaPredicted RBP35.22■■■■□ 3.23
SLC6A11-203ENST00000464828 POLA1P09884 1462 aaPredicted RBP35.21■■■■□ 3.23
SLC6A11-203ENST00000464828 TARBP1Q13395 1621 aaKnown RBP35.17■■■■□ 3.22
SLC6A11-203ENST00000464828 OSCARQ8IYS5 282 aa35.16■■■■□ 3.22
SLC6A11-203ENST00000464828 EIF4G3O43432 1585 aaKnown RBP35.12■■■■□ 3.21
SLC6A11-203ENST00000464828 CUX1P39880 1505 aa35.1■■■■□ 3.21
SLC6A11-203ENST00000464828 SOGA1O94964 1423 aa35.09■■■■□ 3.21
SLC6A11-203ENST00000464828 FGD5Q6ZNL6 1462 aa35.07■■■■□ 3.2
SLC6A11-203ENST00000464828 WDR97A6NE52 1622 aa35.01■■■■□ 3.19
SLC6A11-203ENST00000464828 AQRO60306 1485 aaKnown RBP eCLIP35.01■■■■□ 3.19
SLC6A11-203ENST00000464828 RAD54L2Q9Y4B4 1467 aa35.01■■■■□ 3.19
SLC6A11-203ENST00000464828 TDRD9Q8NDG6 1382 aaKnown RBP34.89■■■■□ 3.18
SLC6A11-203ENST00000464828 WRNQ14191 1432 aaPredicted RBP eCLIP34.8■■■■□ 3.16
SLC6A11-203ENST00000464828 GRIN2BQ13224 1484 aa34.76■■■■□ 3.15
SLC6A11-203ENST00000464828 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.15
SLC6A11-203ENST00000464828 TOP2BQ02880 1626 aa34.75■■■■□ 3.15
SLC6A11-203ENST00000464828 BIVM-ERCC5R4GMW8 1640 aa34.73■■■■□ 3.15
SLC6A11-203ENST00000464828 MAGI1Q96QZ7 1491 aaPredicted RBP34.72■■■■□ 3.15
SLC6A11-203ENST00000464828 CHD1O14646 1710 aa34.72■■■■□ 3.15
SLC6A11-203ENST00000464828 FBLN2P98095 1184 aa34.71■■■■□ 3.15
SLC6A11-203ENST00000464828 SNAPC4Q5SXM2 1469 aa34.7■■■■□ 3.15
SLC6A11-203ENST00000464828 GAPVD1Q14C86 1478 aa34.68■■■■□ 3.14
SLC6A11-203ENST00000464828 SYNJ1O43426 1573 aa34.65■■■■□ 3.14
SLC6A11-203ENST00000464828 CHMP7Q8WUX9 453 aaPredicted RBP34.61■■■■□ 3.13
SLC6A11-203ENST00000464828 ABCA5Q8WWZ7 1642 aa34.6■■■■□ 3.13
SLC6A11-203ENST00000464828 TRIM41Q8WV44 630 aa34.6■■■■□ 3.13
SLC6A11-203ENST00000464828 PBRM1Q86U86 1689 aa34.58■■■■□ 3.13
SLC6A11-203ENST00000464828 SYNJ2O15056 1496 aa34.58■■■■□ 3.13
SLC6A11-203ENST00000464828 RIMBP3CA6NJZ7 1639 aa34.52■■■■□ 3.12
SLC6A11-203ENST00000464828 RIMBP3BA6NNM3 1639 aa34.52■■■■□ 3.12
SLC6A11-203ENST00000464828 RIMBP3Q9UFD9 1639 aa34.52■■■■□ 3.12
SLC6A11-203ENST00000464828 ARHGEF11O15085 1522 aa34.5■■■■□ 3.11
SLC6A11-203ENST00000464828 CLASP1Q7Z460 1538 aa34.38■■■■□ 3.09
SLC6A11-203ENST00000464828 ERICH3Q5RHP9 1530 aa34.36■■■■□ 3.09
SLC6A11-203ENST00000464828 ADAMTS12P58397 1594 aa34.31■■■■□ 3.08
SLC6A11-203ENST00000464828 FHAD1B1AJZ9 1412 aa34.3■■■■□ 3.08
SLC6A11-203ENST00000464828 GRIN2AQ12879 1464 aa34.27■■■■□ 3.08
SLC6A11-203ENST00000464828 CYB5RLQ6IPT4 315 aa34.21■■■■□ 3.07
SLC6A11-203ENST00000464828 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
SLC6A11-203ENST00000464828 NUP160Q12769 1436 aa34.14■■■■□ 3.06
SLC6A11-203ENST00000464828 KIF27Q86VH2 1401 aa34.14■■■■□ 3.06
SLC6A11-203ENST00000464828 CEP170Q5SW79 1584 aa34.06■■■■□ 3.04
SLC6A11-203ENST00000464828 IGF1RP08069 1367 aa33.98■■■■□ 3.03
SLC6A11-203ENST00000464828 CUL7Q14999 1698 aa33.97■■■■□ 3.03
SLC6A11-203ENST00000464828 SHROOM2Q13796 1616 aa33.92■■■■□ 3.02
SLC6A11-203ENST00000464828 JPH4Q96JJ6 628 aa33.81■■■■□ 3
SLC6A11-203ENST00000464828 RUSC2Q8N2Y8 1516 aa33.8■■■■□ 3
SLC6A11-203ENST00000464828 CARMIL1Q5VZK9 1371 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 375.8 ms