RNA–Protein interactions for RNA: ENST00000464700.5

PQLC3-207, Transcript of PQ loop repeat containing 3, humanhuman

TSL 2

Gene PQLC3, Length 453 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC3-207ENST00000464700 NISCHQ9Y2I1 1504 aa52.09■■■■■ 5.93
PQLC3-207ENST00000464700 CCDC180Q9P1Z9 1646 aa46.6■■■■■ 5.05
PQLC3-207ENST00000464700 ABCC9O60706 1549 aa46.09■■■■■ 4.97
PQLC3-207ENST00000464700 RB1CC1Q8TDY2 1594 aa44.14■■■■■ 4.66
PQLC3-207ENST00000464700 NACADO15069 1562 aa43.95■■■■■ 4.63
PQLC3-207ENST00000464700 DCAF8L2P0C7V8 631 aa43.69■■■■■ 4.58
PQLC3-207ENST00000464700 MYO15BQ96JP2 1530 aa43.53■■■■■ 4.56
PQLC3-207ENST00000464700 ZCCHC6Q5VYS8 1495 aaKnown RBP43.26■■■■■ 4.52
PQLC3-207ENST00000464700 UNC13AQ9UPW8 1703 aa43.12■■■■■ 4.49
PQLC3-207ENST00000464700 DCAF1Q9Y4B6 1507 aa43.12■■■■■ 4.49
PQLC3-207ENST00000464700 PABPN1Q86U42 306 aaKnown RBP eCLIP42.96■■■■■ 4.47
PQLC3-207ENST00000464700 DNAJC5BQ9UF47 199 aa42.85■■■■■ 4.45
PQLC3-207ENST00000464700 BICRAQ9NZM4 1560 aa42.82■■■■■ 4.44
PQLC3-207ENST00000464700 SCRIBQ14160 1630 aa42.41■■■■■ 4.38
PQLC3-207ENST00000464700 SHROOM4Q9ULL8 1493 aa42.36■■■■■ 4.37
PQLC3-207ENST00000464700 EIF4G1Q04637 1599 aaKnown RBP41.72■■■■■ 4.27
PQLC3-207ENST00000464700 CC2D2AQ9P2K1 1620 aa41.69■■■■■ 4.27
PQLC3-207ENST00000464700 CECR2Q9BXF3 1484 aa41.51■■■■■ 4.24
PQLC3-207ENST00000464700 NCAPD3P42695 1498 aa40.56■■■■■ 4.08
PQLC3-207ENST00000464700 SMARCA4P51532 1647 aa40.54■■■■■ 4.08
PQLC3-207ENST00000464700 ATAD2BQ9ULI0 1458 aa40.47■■■■■ 4.07
PQLC3-207ENST00000464700 BAZ1AQ9NRL2 1556 aaPredicted RBP40.42■■■■■ 4.06
PQLC3-207ENST00000464700 SMARCA2P51531 1590 aa40.41■■■■■ 4.06
PQLC3-207ENST00000464700 HMGXB3Q12766 1538 aa40.31■■■■■ 4.04
PQLC3-207ENST00000464700 PEG3Q9GZU2 1588 aa40.19■■■■■ 4.02
PQLC3-207ENST00000464700 MROH2BQ7Z745 1585 aa40.11■■■■■ 4.01
PQLC3-207ENST00000464700 BAZ1BQ9UIG0 1483 aaKnown RBP40.1■■■■■ 4.01
PQLC3-207ENST00000464700 ERCC6Q03468 1493 aa39.79■■■■□ 3.96
PQLC3-207ENST00000464700 NESP48681 1621 aa39.72■■■■□ 3.95
PQLC3-207ENST00000464700 WIZO95785 1651 aa39.65■■■■□ 3.94
PQLC3-207ENST00000464700 CUX2O14529 1486 aa39.62■■■■□ 3.93
PQLC3-207ENST00000464700 LAMC3Q9Y6N6 1575 aa39.59■■■■□ 3.93
PQLC3-207ENST00000464700 RSF1Q96T23 1441 aaPredicted RBP39.45■■■■□ 3.91
PQLC3-207ENST00000464700 PDS5BQ9NTI5 1447 aa39.33■■■■□ 3.89
PQLC3-207ENST00000464700 CADPSQ9ULU8 1353 aa39.33■■■■□ 3.89
PQLC3-207ENST00000464700 THOC2Q8NI27 1593 aaKnown RBP39.27■■■■□ 3.88
PQLC3-207ENST00000464700 KIF21AQ7Z4S6 1674 aa39.25■■■■□ 3.87
PQLC3-207ENST00000464700 TOP2AP11388 1531 aaKnown RBP39.21■■■■□ 3.87
PQLC3-207ENST00000464700 DNAJC5Q9H3Z4 198 aa39.09■■■■□ 3.85
PQLC3-207ENST00000464700 CFTRP13569 1480 aa38.98■■■■□ 3.83
PQLC3-207ENST00000464700 MRC2Q9UBG0 1479 aa38.95■■■■□ 3.83
PQLC3-207ENST00000464700 CEP164Q9UPV0 1460 aa38.88■■■■□ 3.81
PQLC3-207ENST00000464700 FANCD2Q9BXW9 1451 aa38.87■■■■□ 3.81
PQLC3-207ENST00000464700 WDR62O43379 1518 aa38.85■■■■□ 3.81
PQLC3-207ENST00000464700 CCDC88BA6NC98 1476 aa38.74■■■■□ 3.79
PQLC3-207ENST00000464700 PRDM2Q13029 1718 aa38.65■■■■□ 3.78
PQLC3-207ENST00000464700 URB2Q14146 1524 aaKnown RBP38.52■■■■□ 3.76
PQLC3-207ENST00000464700 TOPBP1Q92547 1522 aa38.18■■■■□ 3.7
PQLC3-207ENST00000464700 ABCC8Q09428 1581 aa38.18■■■■□ 3.7
PQLC3-207ENST00000464700 DNMBPQ6XZF7 1577 aa38.1■■■■□ 3.69
PQLC3-207ENST00000464700 IFT140Q96RY7 1462 aa38.09■■■■□ 3.69
PQLC3-207ENST00000464700 SUPT5HO00267 1087 aaKnown RBP37.95■■■■□ 3.67
PQLC3-207ENST00000464700 ZNF608Q9ULD9 1512 aaPredicted RBP37.95■■■■□ 3.67
PQLC3-207ENST00000464700 OSCARQ8IYS5 282 aa37.86■■■■□ 3.65
PQLC3-207ENST00000464700 TARBP1Q13395 1621 aaKnown RBP37.83■■■■□ 3.65
PQLC3-207ENST00000464700 POLA1P09884 1462 aaPredicted RBP37.82■■■■□ 3.64
PQLC3-207ENST00000464700 EIF4G3O43432 1585 aaKnown RBP37.79■■■■□ 3.64
PQLC3-207ENST00000464700 CUX1P39880 1505 aa37.67■■■■□ 3.62
PQLC3-207ENST00000464700 AQRO60306 1485 aaKnown RBP eCLIP37.66■■■■□ 3.62
PQLC3-207ENST00000464700 SOGA1O94964 1423 aa37.65■■■■□ 3.62
PQLC3-207ENST00000464700 FGD5Q6ZNL6 1462 aa37.64■■■■□ 3.62
PQLC3-207ENST00000464700 RAD54L2Q9Y4B4 1467 aa37.64■■■■□ 3.62
PQLC3-207ENST00000464700 WDR97A6NE52 1622 aa37.52■■■■□ 3.6
PQLC3-207ENST00000464700 TDRD9Q8NDG6 1382 aaKnown RBP37.5■■■■□ 3.59
PQLC3-207ENST00000464700 TRIM41Q8WV44 630 aa37.47■■■■□ 3.59
PQLC3-207ENST00000464700 CHD1O14646 1710 aa37.42■■■■□ 3.58
PQLC3-207ENST00000464700 RIMBP3CA6NJZ7 1639 aa37.31■■■■□ 3.56
PQLC3-207ENST00000464700 RIMBP3BA6NNM3 1639 aa37.31■■■■□ 3.56
PQLC3-207ENST00000464700 RIMBP3Q9UFD9 1639 aa37.31■■■■□ 3.56
PQLC3-207ENST00000464700 FBLN2P98095 1184 aa37.3■■■■□ 3.56
PQLC3-207ENST00000464700 GRIN2BQ13224 1484 aa37.3■■■■□ 3.56
PQLC3-207ENST00000464700 SNAPC4Q5SXM2 1469 aa37.3■■■■□ 3.56
PQLC3-207ENST00000464700 MAGI1Q96QZ7 1491 aaPredicted RBP37.27■■■■□ 3.56
PQLC3-207ENST00000464700 ABCA10Q8WWZ4 1543 aa37.26■■■■□ 3.56
PQLC3-207ENST00000464700 ARHGEF11O15085 1522 aa37.25■■■■□ 3.55
PQLC3-207ENST00000464700 TOP2BQ02880 1626 aa37.21■■■■□ 3.55
PQLC3-207ENST00000464700 BIVM-ERCC5R4GMW8 1640 aa37.21■■■■□ 3.55
PQLC3-207ENST00000464700 GAPVD1Q14C86 1478 aa37.21■■■■□ 3.55
PQLC3-207ENST00000464700 WRNQ14191 1432 aaPredicted RBP eCLIP37.21■■■■□ 3.55
PQLC3-207ENST00000464700 PBRM1Q86U86 1689 aa37.17■■■■□ 3.54
PQLC3-207ENST00000464700 ABCA5Q8WWZ7 1642 aa37.16■■■■□ 3.54
PQLC3-207ENST00000464700 SYNJ1O43426 1573 aa37.15■■■■□ 3.54
PQLC3-207ENST00000464700 CHMP7Q8WUX9 453 aaPredicted RBP37.14■■■■□ 3.54
PQLC3-207ENST00000464700 SYNJ2O15056 1496 aa37.13■■■■□ 3.53
PQLC3-207ENST00000464700 CLASP1Q7Z460 1538 aa37.03■■■■□ 3.52
PQLC3-207ENST00000464700 CYB5RLQ6IPT4 315 aa36.9■■■■□ 3.5
PQLC3-207ENST00000464700 ARAP1Q96P48 1450 aa36.89■■■■□ 3.5
PQLC3-207ENST00000464700 ADAMTS12P58397 1594 aa36.84■■■■□ 3.49
PQLC3-207ENST00000464700 ERICH3Q5RHP9 1530 aa36.82■■■■□ 3.48
PQLC3-207ENST00000464700 GRIN2AQ12879 1464 aa36.81■■■■□ 3.48
PQLC3-207ENST00000464700 FHAD1B1AJZ9 1412 aa36.76■■■■□ 3.48
PQLC3-207ENST00000464700 NUP160Q12769 1436 aa36.68■■■■□ 3.46
PQLC3-207ENST00000464700 CEP170Q5SW79 1584 aa36.64■■■■□ 3.46
PQLC3-207ENST00000464700 KIF27Q86VH2 1401 aa36.49■■■■□ 3.43
PQLC3-207ENST00000464700 SHROOM2Q13796 1616 aa36.48■■■■□ 3.43
PQLC3-207ENST00000464700 ERCC6L2Q5T890 1561 aa36.44■■■■□ 3.42
PQLC3-207ENST00000464700 IGF1RP08069 1367 aa36.41■■■■□ 3.42
PQLC3-207ENST00000464700 CUL7Q14999 1698 aa36.36■■■■□ 3.41
PQLC3-207ENST00000464700 TRHP20396 242 aaPredicted RBP36.35■■■■□ 3.41
PQLC3-207ENST00000464700 RUSC2Q8N2Y8 1516 aa36.31■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms